BLASTX nr result

ID: Coptis21_contig00031656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031656
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268156.2| PREDICTED: protein PRD1-like [Vitis vinifera]     134   6e-30
emb|CBI39380.3| unnamed protein product [Vitis vinifera]              134   6e-30
emb|CAN80933.1| hypothetical protein VITISV_017363 [Vitis vinifera]   134   6e-30
ref|XP_002516401.1| conserved hypothetical protein [Ricinus comm...   115   4e-24
ref|XP_002302892.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23

>ref|XP_002268156.2| PREDICTED: protein PRD1-like [Vitis vinifera]
          Length = 1291

 Score =  134 bits (338), Expect = 6e-30
 Identities = 70/141 (49%), Positives = 95/141 (67%)
 Frame = -1

Query: 471  LRLKQAPGWMRSVFDKSCITGIVKNLSASNVSEEMVQLFRMLMVSDYLSKDDIAGLNHVF 292
            L+L   PGWM+SVFD SCI+GI++NLS SNVS E V LFR L+  +YL  + IA LN VF
Sbjct: 1160 LKLHSIPGWMKSVFDDSCISGIIENLSVSNVSMETVLLFRELLNHEYLKDEQIACLNRVF 1219

Query: 291  QVCRKHVYTDSIQEDNTEEHFEKVLAVPDDLHKIFKLLIHLMXXXXXXXXSKGTQAGNRK 112
            Q CRKH+Y+ + Q+++ EE+ EKV+A+PDDL K  + LIHLM        +     G+++
Sbjct: 1220 QACRKHIYSGNTQDESREENIEKVIALPDDLGKACEFLIHLM------SSNSSAHKGSKR 1273

Query: 111  LLEEIDMFLQESSKRITTMEN 49
            LLEEI+MF      +  T+EN
Sbjct: 1274 LLEEIEMF-----SKSLTLEN 1289


>emb|CBI39380.3| unnamed protein product [Vitis vinifera]
          Length = 1312

 Score =  134 bits (338), Expect = 6e-30
 Identities = 70/141 (49%), Positives = 95/141 (67%)
 Frame = -1

Query: 471  LRLKQAPGWMRSVFDKSCITGIVKNLSASNVSEEMVQLFRMLMVSDYLSKDDIAGLNHVF 292
            L+L   PGWM+SVFD SCI+GI++NLS SNVS E V LFR L+  +YL  + IA LN VF
Sbjct: 1181 LKLHSIPGWMKSVFDDSCISGIIENLSVSNVSMETVLLFRELLNHEYLKDEQIACLNRVF 1240

Query: 291  QVCRKHVYTDSIQEDNTEEHFEKVLAVPDDLHKIFKLLIHLMXXXXXXXXSKGTQAGNRK 112
            Q CRKH+Y+ + Q+++ EE+ EKV+A+PDDL K  + LIHLM        +     G+++
Sbjct: 1241 QACRKHIYSGNTQDESREENIEKVIALPDDLGKACEFLIHLM------SSNSSAHKGSKR 1294

Query: 111  LLEEIDMFLQESSKRITTMEN 49
            LLEEI+MF      +  T+EN
Sbjct: 1295 LLEEIEMF-----SKSLTLEN 1310


>emb|CAN80933.1| hypothetical protein VITISV_017363 [Vitis vinifera]
          Length = 928

 Score =  134 bits (338), Expect = 6e-30
 Identities = 70/141 (49%), Positives = 95/141 (67%)
 Frame = -1

Query: 471  LRLKQAPGWMRSVFDKSCITGIVKNLSASNVSEEMVQLFRMLMVSDYLSKDDIAGLNHVF 292
            L+L   PGWM+SVFD SCI+GI++NLS SNVS E V LFR L+  +YL  + IA LN VF
Sbjct: 797  LKLHSIPGWMKSVFDDSCISGIIENLSVSNVSMETVLLFRELLNHEYLKDEQIACLNRVF 856

Query: 291  QVCRKHVYTDSIQEDNTEEHFEKVLAVPDDLHKIFKLLIHLMXXXXXXXXSKGTQAGNRK 112
            Q CRKH+Y+ + Q+++ EE+ EKV+A+PDDL K  + LIHLM        +     G+++
Sbjct: 857  QACRKHIYSGNTQDESREENIEKVIALPDDLGKACEFLIHLM------SSNSSAHKGSKR 910

Query: 111  LLEEIDMFLQESSKRITTMEN 49
            LLEEI+MF      +  T+EN
Sbjct: 911  LLEEIEMF-----SKSLTLEN 926


>ref|XP_002516401.1| conserved hypothetical protein [Ricinus communis]
            gi|223544499|gb|EEF46018.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1304

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/131 (44%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
 Frame = -1

Query: 471  LRLKQAPGWMRSVFDKSCITGIVKNLSASNVSEEMVQLFRMLMVSDYLSKDDIAGLNHVF 292
            L+L++ P WMR+VFD  CI+GI++N++ASN++ EMV LFR L+ S++L  D IA LN V 
Sbjct: 1166 LKLQKCPVWMRTVFDDPCISGIIRNIAASNITTEMVLLFRELVNSEFLKTDQIASLNRVL 1225

Query: 291  QVCRKHVYTDSIQEDNTEEHFEKVLAVPDDLHKIFKLLIHLMXXXXXXXXSK-GTQAGNR 115
            Q CRKH+Y++  Q + T EH EK +    DL  + + LI+LM           G Q   +
Sbjct: 1226 QECRKHIYSEDSQNECTYEHIEKRVFTKGDLGDVCEYLIYLMSSETHLDADSVGLQTMKK 1285

Query: 114  KLLEEIDMFLQ 82
            +LLEEI++F +
Sbjct: 1286 RLLEEIEIFFK 1296


>ref|XP_002302892.1| predicted protein [Populus trichocarpa] gi|222844618|gb|EEE82165.1|
            predicted protein [Populus trichocarpa]
          Length = 1344

 Score =  112 bits (279), Expect = 4e-23
 Identities = 62/154 (40%), Positives = 88/154 (57%), Gaps = 20/154 (12%)
 Frame = -1

Query: 471  LRLKQAPGWMRSVFDKSCITGIVKNLSASNVSEEMVQLFRMLMVSDYLSKDDIAGLNHVF 292
            L+L+++P WMR+VFD  CI+GI+KNL ASN+S EMV LFR L+ S +L  + IA LN + 
Sbjct: 1187 LKLQKSPEWMRTVFDDPCISGIIKNLEASNISSEMVLLFRELLNSMFLKDEQIACLNRIL 1246

Query: 291  QV--------------------CRKHVYTDSIQEDNTEEHFEKVLAVPDDLHKIFKLLIH 172
            Q+                    CRK +YT+  Q D T+E  EK     DDL ++ + LIH
Sbjct: 1247 QLVSSLSMDKKAKEGKSKGAQECRKRLYTEDCQNDCTDEKIEKRTITTDDLGEVCEYLIH 1306

Query: 171  LMXXXXXXXXSKGTQAGNRKLLEEIDMFLQESSK 70
            +M          G    +++LLEEI++F + SSK
Sbjct: 1307 VMSSAKSLDVDCGDLQTSKRLLEEIELFFKTSSK 1340


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