BLASTX nr result

ID: Coptis21_contig00031616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031616
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_171669.1| protein sec fourteen-like protein-20 [Arabidops...   345   1e-92
ref|XP_002299355.1| predicted protein [Populus trichocarpa] gi|2...   342   5e-92
gb|ABK93168.1| unknown [Populus trichocarpa]                          342   5e-92
ref|XP_002892050.1| hypothetical protein ARALYDRAFT_470113 [Arab...   337   2e-90
ref|XP_002271441.1| PREDICTED: random slug protein 5 [Vitis vini...   335   9e-90

>ref|NP_171669.1| protein sec fourteen-like protein-20 [Arabidopsis thaliana]
           gi|8671832|gb|AAF78395.1|AC009273_1 Strong similarity to
           polyphosphoinositide binding protein Ssh2 from soybean
           gb|AF024652. It contains a CRAL/TRIO domain PF|00650.
           EST gb|AI995792 comes from this gene [Arabidopsis
           thaliana] gi|21554088|gb|AAM63169.1|
           polyphosphoinositide binding protein, putative
           [Arabidopsis thaliana] gi|23297520|gb|AAN12987.1|
           putative polyphosphoinositide-binding protein
           [Arabidopsis thaliana] gi|332189193|gb|AEE27314.1|
           protein sec fourteen-like protein-20 [Arabidopsis
           thaliana]
          Length = 255

 Score =  345 bits (884), Expect = 1e-92
 Identities = 171/262 (65%), Positives = 201/262 (76%)
 Frame = +2

Query: 11  MENASTNKEDVHQEEDVKCSTTSCINGRNELEQHKLGLMRACVEKQDPTSKEVDDLMLRR 190
           MEN  T +E     E     T   I   +E+E+ K+G+MRA  ++QDP +KEVDDLM+RR
Sbjct: 1   MENKETKQEPAAAAEQ---KTVPLIE--DEIERSKVGIMRALCDRQDPETKEVDDLMIRR 55

Query: 191 FLRARDLDIEKASSFFLKYLKWSREFLPNGSIMESQISHDLAHKKLFLQGMDRNRRPIMV 370
           FLRARDLDIEKAS+ FL YL W R  LP G I E++I++DL+H K+ +QG D+  RPI V
Sbjct: 56  FLRARDLDIEKASTMFLNYLTWKRSMLPKGHIPEAEIANDLSHNKMCMQGHDKMGRPIAV 115

Query: 371 VFGGKHFPNKGKGGLDEFKRFVVYTLEKICLRMPSGQEKFIVIADLQGWGYSNCDIRGYL 550
             G +H P+KG    DEFKRFVVYTLEKIC RMP GQEKF+ I DLQGWGYSNCDIRGYL
Sbjct: 116 AIGNRHNPSKGNP--DEFKRFVVYTLEKICARMPRGQEKFVAIGDLQGWGYSNCDIRGYL 173

Query: 551 GALSILQDCYPERLGKLLLVHVPYIFMTAWKIIYPFIDNHTRKKIAFVENKTLTSTLLQD 730
            ALS LQDCYPERLGKL +VH PYIFMTAWK+IYPFID +T+KKI FVENK LT TLL+D
Sbjct: 174 AALSTLQDCYPERLGKLYIVHAPYIFMTAWKVIYPFIDANTKKKIVFVENKKLTPTLLED 233

Query: 731 IDESQLPEIYGGKQRLVPIENS 796
           IDESQLP+IYGGK  LVPI+ +
Sbjct: 234 IDESQLPDIYGGKLPLVPIQET 255


>ref|XP_002299355.1| predicted protein [Populus trichocarpa] gi|222846613|gb|EEE84160.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  342 bits (878), Expect = 5e-92
 Identities = 163/233 (69%), Positives = 195/233 (83%)
 Frame = +2

Query: 95  NELEQHKLGLMRACVEKQDPTSKEVDDLMLRRFLRARDLDIEKASSFFLKYLKWSREFLP 274
           NE+EQ K+ LMRA VE++DP+ KEVDDLM+RRFLRAR+LDIEKAS+ FLKYL W R  +P
Sbjct: 1   NEIEQRKVRLMRAFVEREDPSVKEVDDLMIRRFLRARELDIEKASTLFLKYLSWRRSIIP 60

Query: 275 NGSIMESQISHDLAHKKLFLQGMDRNRRPIMVVFGGKHFPNKGKGGLDEFKRFVVYTLEK 454
           NG I  S+I ++LA  KLF+QG D+  RPI+VVFG  H P KG   L+EFKRFV YTL++
Sbjct: 61  NGFISSSEIPNELAQNKLFMQGFDKQNRPIVVVFGAGHKPYKGS--LEEFKRFVAYTLDR 118

Query: 455 ICLRMPSGQEKFIVIADLQGWGYSNCDIRGYLGALSILQDCYPERLGKLLLVHVPYIFMT 634
           IC RMP+GQEKF+ IADL+GWGY+N DIRGYL ALSILQDC+PERLGKL +VHVPYIFMT
Sbjct: 119 ICARMPAGQEKFVSIADLEGWGYTNSDIRGYLAALSILQDCFPERLGKLFIVHVPYIFMT 178

Query: 635 AWKIIYPFIDNHTRKKIAFVENKTLTSTLLQDIDESQLPEIYGGKQRLVPIEN 793
           AWK++YPFID+ T+KKI FVENK L STLL DIDESQLP++YGGK  LVPI++
Sbjct: 179 AWKVVYPFIDSKTKKKIIFVENKKLRSTLLGDIDESQLPDVYGGKLSLVPIQD 231


>gb|ABK93168.1| unknown [Populus trichocarpa]
          Length = 255

 Score =  342 bits (878), Expect = 5e-92
 Identities = 163/233 (69%), Positives = 195/233 (83%)
 Frame = +2

Query: 95  NELEQHKLGLMRACVEKQDPTSKEVDDLMLRRFLRARDLDIEKASSFFLKYLKWSREFLP 274
           NE+EQ K+ LMRA VE++DP+ KEVDDLM+RRFLRAR+LDIEKAS+ FLKYL W R  +P
Sbjct: 24  NEIEQRKVRLMRAFVEREDPSVKEVDDLMIRRFLRARELDIEKASTLFLKYLSWRRSIIP 83

Query: 275 NGSIMESQISHDLAHKKLFLQGMDRNRRPIMVVFGGKHFPNKGKGGLDEFKRFVVYTLEK 454
           NG I  S+I ++LA  KLF+QG D+  RPI+VVFG  H P KG   L+EFKRFV YTL++
Sbjct: 84  NGFISSSEIPNELAQNKLFMQGFDKQNRPIVVVFGAGHKPYKGS--LEEFKRFVAYTLDR 141

Query: 455 ICLRMPSGQEKFIVIADLQGWGYSNCDIRGYLGALSILQDCYPERLGKLLLVHVPYIFMT 634
           IC RMP+GQEKF+ IADL+GWGY+N DIRGYL ALSILQDC+PERLGKL +VHVPYIFMT
Sbjct: 142 ICARMPAGQEKFVSIADLEGWGYTNSDIRGYLAALSILQDCFPERLGKLFIVHVPYIFMT 201

Query: 635 AWKIIYPFIDNHTRKKIAFVENKTLTSTLLQDIDESQLPEIYGGKQRLVPIEN 793
           AWK++YPFID+ T+KKI FVENK L STLL DIDESQLP++YGGK  LVPI++
Sbjct: 202 AWKVVYPFIDSKTKKKIIFVENKKLRSTLLGDIDESQLPDVYGGKLSLVPIQD 254


>ref|XP_002892050.1| hypothetical protein ARALYDRAFT_470113 [Arabidopsis lyrata subsp.
           lyrata] gi|297337892|gb|EFH68309.1| hypothetical protein
           ARALYDRAFT_470113 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score =  337 bits (864), Expect = 2e-90
 Identities = 161/234 (68%), Positives = 191/234 (81%)
 Frame = +2

Query: 95  NELEQHKLGLMRACVEKQDPTSKEVDDLMLRRFLRARDLDIEKASSFFLKYLKWSREFLP 274
           +E+E+ K+G+MRA  ++QDP +KEVDDLM+RRFLRARD DIEKAS+ FLKYL W R  LP
Sbjct: 25  DEIERSKVGIMRALCDRQDPETKEVDDLMIRRFLRARDHDIEKASTMFLKYLTWKRSMLP 84

Query: 275 NGSIMESQISHDLAHKKLFLQGMDRNRRPIMVVFGGKHFPNKGKGGLDEFKRFVVYTLEK 454
            G I E++I++DL+H K+ +QG D+  RPI+V  G +H P+KG    DEFKRF VYTLEK
Sbjct: 85  KGHIPEAEIANDLSHNKVCMQGHDKMGRPIVVAIGNRHNPSKGNP--DEFKRFFVYTLEK 142

Query: 455 ICLRMPSGQEKFIVIADLQGWGYSNCDIRGYLGALSILQDCYPERLGKLLLVHVPYIFMT 634
           IC RMP GQEKF+ I DLQGWGYSNCDIRGYL ALS LQDCYPERLGKL +VH PYIFMT
Sbjct: 143 ICARMPRGQEKFVSIGDLQGWGYSNCDIRGYLAALSTLQDCYPERLGKLYIVHAPYIFMT 202

Query: 635 AWKIIYPFIDNHTRKKIAFVENKTLTSTLLQDIDESQLPEIYGGKQRLVPIENS 796
           AWK+IYP ID +T+KKI FVENK LT TLL+DIDESQLP+IYGGK  LVPI+ +
Sbjct: 203 AWKVIYPLIDANTKKKIVFVENKKLTPTLLEDIDESQLPDIYGGKLPLVPIQET 256


>ref|XP_002271441.1| PREDICTED: random slug protein 5 [Vitis vinifera]
           gi|296085533|emb|CBI29265.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  335 bits (859), Expect = 9e-90
 Identities = 159/234 (67%), Positives = 193/234 (82%)
 Frame = +2

Query: 95  NELEQHKLGLMRACVEKQDPTSKEVDDLMLRRFLRARDLDIEKASSFFLKYLKWSREFLP 274
           NE+E+ K+GLMRA VE  DP+SK++DD M+RRFLRARDLDI+KAS+  LKYL W R F+P
Sbjct: 15  NEIEKRKVGLMRARVESADPSSKDLDDFMIRRFLRARDLDIDKASALLLKYLGWRRAFMP 74

Query: 275 NGSIMESQISHDLAHKKLFLQGMDRNRRPIMVVFGGKHFPNKGKGGLDEFKRFVVYTLEK 454
           NG I  S+I ++LA  KLF+QG D+  RPI VV+G +H P KG   L+EFKRFVVY+LEK
Sbjct: 75  NGYISASEIPNELAQNKLFMQGQDKKGRPITVVYGARHKPYKGN--LEEFKRFVVYSLEK 132

Query: 455 ICLRMPSGQEKFIVIADLQGWGYSNCDIRGYLGALSILQDCYPERLGKLLLVHVPYIFMT 634
           IC  MP G+EKFI IAD++GWGY+N DIR YL ALSILQDCYPERLGKL LVHVPY+FMT
Sbjct: 133 ICASMPGGEEKFISIADIEGWGYTNSDIRAYLAALSILQDCYPERLGKLFLVHVPYVFMT 192

Query: 635 AWKIIYPFIDNHTRKKIAFVENKTLTSTLLQDIDESQLPEIYGGKQRLVPIENS 796
           AWK++YPFID+ T+KKI FVENK + STLL DIDE+QLP++YGGK  LVPI++S
Sbjct: 193 AWKVVYPFIDSKTKKKIIFVENKNIKSTLLGDIDENQLPDVYGGKLPLVPIQDS 246


Top