BLASTX nr result

ID: Coptis21_contig00031579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031579
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62805.1| hypothetical protein VITISV_033697 [Vitis vinifera]    56   3e-06

>emb|CAN62805.1| hypothetical protein VITISV_033697 [Vitis vinifera]
          Length = 386

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/78 (34%), Positives = 44/78 (56%)
 Frame = -3

Query: 237 MLTHLRIKMEVLSDEESWMLFKEKVGKIAEYPALQPVASLFLRECKGLPSAIVAFARKLS 58
           M +  ++ +  LSD++SW LFK+K G + ++P    VA   +++C GLPSA+V  AR L 
Sbjct: 296 MESQAKVPLHTLSDQDSWTLFKKKAGNVVDWPDFHDVAWKVVKKCGGLPSALVVVARALG 355

Query: 57  IEEHRIMSENAALSKRQN 4
            ++     E A   +  N
Sbjct: 356 DKDLEEWKEAARQLEMSN 373


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