BLASTX nr result

ID: Coptis21_contig00031527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031527
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278446.1| PREDICTED: uncharacterized protein LOC100241...    86   4e-15
ref|XP_002511891.1| hypothetical protein RCOM_1616170 [Ricinus c...    84   9e-15
ref|XP_002320812.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002302596.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002464552.1| hypothetical protein SORBIDRAFT_01g020500 [S...    61   8e-08

>ref|XP_002278446.1| PREDICTED: uncharacterized protein LOC100241428 [Vitis vinifera]
           gi|297745355|emb|CBI40435.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/107 (41%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
 Frame = -2

Query: 352 GKGWYCKKEMKEGNPLCKHHLIQLKSYNYSDYTHSRGKSSQVKPPVGATTTTTIAANKRR 173
           GKGW C+K  KEG+ LC+HHL QL+SYN S+ + SR        P          + +RR
Sbjct: 137 GKGWQCRKAAKEGHALCEHHLAQLRSYNSSNQSSSRKLDKPADRP----------SVRRR 186

Query: 172 NRG-RVSSASPSEFYYYSGFGPSWSKKRSKKGNEIKVKDVEMEAVDS 35
            RG +   ++P+E+YYYSGFGP W KKR     E    +++ E+  S
Sbjct: 187 GRGLKKPPSNPNEYYYYSGFGPLWGKKRGGSKPESNRNELKTESPPS 233


>ref|XP_002511891.1| hypothetical protein RCOM_1616170 [Ricinus communis]
           gi|223549071|gb|EEF50560.1| hypothetical protein
           RCOM_1616170 [Ricinus communis]
          Length = 311

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
 Frame = -2

Query: 352 GKGWYCKKEMKEGNPLCKHHLIQLKSYNYSDYTHSR-----GKSSQVKPPVGATTTTTIA 188
           GK W+CK E+KEG+ +C HH++     +Y++   S        S  +K P  A   T   
Sbjct: 143 GKEWHCKNELKEGHSMCDHHILSSLKSSYNNNVTSACIASPTNSPSIKKPEKAVAGTRRG 202

Query: 187 ANKRRNRGRVSSASPSEFYYYSGFGPSWSKKRSKKGNEIKVKDVEME 47
             K   +G+ SS++P EFYYYSGFGP W K+R  +G   K +  E E
Sbjct: 203 RGKGAKKGQSSSSNPYEFYYYSGFGPLWGKRRGDRGEGNKNESKESE 249


>ref|XP_002320812.1| predicted protein [Populus trichocarpa] gi|222861585|gb|EEE99127.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
 Frame = -2

Query: 352 GKGWYCKKEMKEGNPLCKHH--LIQLKSYNYSDYTHSRGKSSQVKPP--VGATTTTTIAA 185
           GKGW+CK + K G+ +C HH  L   KS +YS+  ++   S+  K P  V +        
Sbjct: 138 GKGWHCKNDTKNGHTVCDHHHHLTSHKS-SYSNINNNINGSAATKKPDKVASIIGARRGR 196

Query: 184 NKRRNRGRVSSASPSEFYYYSGFGPSWSKKRSKKG--NEIKVKDVEMEAV 41
            K   +G  SS++P EFYYYSGFGP W K+R  K   N+ + KDV+   V
Sbjct: 197 AKSAKKGSSSSSNPYEFYYYSGFGPLWGKRRGDKDTVNKNEAKDVDNSTV 246


>ref|XP_002302596.1| predicted protein [Populus trichocarpa] gi|222844322|gb|EEE81869.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 9/124 (7%)
 Frame = -2

Query: 352 GKGWYCKKEMKEGNPLCKHH--LIQLKSYNYSDYTHSRGKSSQVKPPVGATTTTTIAAN- 182
           GKGW+CK E + G P+C HH  L  LKS + ++   +    +  KP  G   T       
Sbjct: 137 GKGWHCKNETRNGLPMCDHHHHLTSLKSSSCNNGNINGSAIATKKPDKGTCITGARRGRA 196

Query: 181 KRRNRGRVSSASPSEFYYYSGFGPSWSKKRSKKG--NEIKVKDVE----MEAVDSDTNAE 20
           K   +G  S+++P EFYYYSGFGP W K+R  +   N+ + KDV+    ++++  +T   
Sbjct: 197 KSAKKGSSSNSNPYEFYYYSGFGPLWGKRRGDRDAVNKNEDKDVDNGTIIDSMTQNTTPF 256

Query: 19  ASSS 8
           +SSS
Sbjct: 257 SSSS 260


>ref|XP_002464552.1| hypothetical protein SORBIDRAFT_01g020500 [Sorghum bicolor]
           gi|241918406|gb|EER91550.1| hypothetical protein
           SORBIDRAFT_01g020500 [Sorghum bicolor]
          Length = 405

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 12/126 (9%)
 Frame = -2

Query: 352 GKGWYCKKEMKEGNPLCKHHLIQLKSYNYSDYT-HSRGKSSQVKP-------PV---GAT 206
           G+ W+C + + + + LC++HL+Q +SY   D+   S  +S + KP       PV    A+
Sbjct: 187 GRRWHCNRPVSQPDSLCEYHLVQKRSYLNPDFEFQSVAESEKPKPKPKPALAPVQAAAAS 246

Query: 205 TTTTIAANKRRNRGRVSSASPSE-FYYYSGFGPSWSKKRSKKGNEIKVKDVEMEAVDSDT 29
            ++T +  +++ +  V+  S +E FYYY+GFGP  SK++ + G   +    + E  + + 
Sbjct: 247 KSSTSSKPRKKKKKPVNDCSATEGFYYYAGFGPFRSKRQCRSGGMNEPLPAKQEEEEKEE 306

Query: 28  NAEASS 11
             E +S
Sbjct: 307 TPEDAS 312


Top