BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031514
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containi...   414   e-113
emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]   411   e-112
ref|XP_002510620.1| pentatricopeptide repeat-containing protein,...   402   e-110
ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   371   e-101
ref|XP_003610363.1| Pentatricopeptide repeat-containing protein ...   371   e-100

>ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
            [Vitis vinifera] gi|302141693|emb|CBI18896.3| unnamed
            protein product [Vitis vinifera]
          Length = 703

 Score =  414 bits (1064), Expect = e-113
 Identities = 204/271 (75%), Positives = 231/271 (85%)
 Frame = -2

Query: 814  EAVELFKIMRREERDESEFVFTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALV 635
            EA+ LF++MRREE  E+EFVFTSVLS+L   E V+  KQIHC+ VKNGLLS V+VGNALV
Sbjct: 192  EALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALV 251

Query: 634  TVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKF 455
            T+Y KCGSL++AL+ FE   +KNS+TWSAMITGYAQ GDSDKAL+LFS M  SG+ PS+F
Sbjct: 252  TMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEF 311

Query: 454  TLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQL 275
            T VGV+NACS+  A  EGKQVHDYLLKLGFESQ+++ TALVDMYAKC    DARKGFD L
Sbjct: 312  TFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYL 371

Query: 274  HEADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGK 95
             E DIVLWTSMI GYVQNGENE+AL LY RMEMEGILPNELTMAS+LKACSSL ALEQGK
Sbjct: 372  QEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGK 431

Query: 94   QIHARTIKYGFGLELPIGSALSSMYTKCGNL 2
            QIHART+KYGFGLE+PIGSALS+MY KCG L
Sbjct: 432  QIHARTVKYGFGLEVPIGSALSTMYAKCGCL 462



 Score =  181 bits (460), Expect = 1e-43
 Identities = 93/239 (38%), Positives = 144/239 (60%)
 Frame = -2

Query: 814  EAVELFKIMRREERDESEFVFTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALV 635
            +A++LF  M       SEF F  V+++  D       KQ+H  ++K G  S + V  ALV
Sbjct: 293  KALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALV 352

Query: 634  TVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKF 455
             +Y KC S+ +A + F+ L E + V W++MI GY Q G+++ AL L+  M+  G+ P++ 
Sbjct: 353  DMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNEL 412

Query: 454  TLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQL 275
            T+  VL ACS+ +A+ +GKQ+H   +K GF  +V I +AL  MYAKCGC  D    F ++
Sbjct: 413  TMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRM 472

Query: 274  HEADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQG 98
               D++ W +MI+G  QNG  +EAL L+  M++EG  P+ +T  +IL ACS +  +E+G
Sbjct: 473  PARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERG 531



 Score =  171 bits (433), Expect = 2e-40
 Identities = 95/271 (35%), Positives = 153/271 (56%), Gaps = 2/271 (0%)
 Frame = -2

Query: 808 VELFKIMRREERDESEFVFTSVLSSLVDNEFVDVS--KQIHCLVVKNGLLSFVAVGNALV 635
           +ELF+ MR E    +   F  V ++   +  VD +  +  H + +K      V VG++L+
Sbjct: 93  MELFQRMRAENTAPNAHTFAGVFTAA--STLVDAAGGRLAHAVAIKMDSCRDVFVGSSLM 150

Query: 634 TVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKF 455
            +Y K G   EA + F+ + E+NSV+W+ MI+GYA    + +AL LF  M+      ++F
Sbjct: 151 NMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEF 210

Query: 454 TLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQL 275
               VL+A +    +  GKQ+H   +K G  S V +  ALV MYAKCG   DA + F+  
Sbjct: 211 VFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETS 270

Query: 274 HEADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGK 95
            + + + W++MI GY Q+G++++AL L+  M + GI P+E T   ++ ACS L A  +GK
Sbjct: 271 SDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGK 330

Query: 94  QIHARTIKYGFGLELPIGSALSSMYTKCGNL 2
           Q+H   +K GF  ++ + +AL  MY KC ++
Sbjct: 331 QVHDYLLKLGFESQIYVMTALVDMYAKCSSI 361



 Score =  155 bits (391), Expect = 1e-35
 Identities = 89/253 (35%), Positives = 131/253 (51%), Gaps = 2/253 (0%)
 Frame = -2

Query: 754 FTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALVTVYTKCGSLEEALRAFELLG 575
           F + L     N  +   K +H  ++K+   S V + N+LV +Y KC  L EA   FE + 
Sbjct: 9   FFTALLQYTHNRSLQKGKALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREAKFVFERIQ 67

Query: 574 EKNSVTWSAMITGYAQGGDSDKA--LRLFSEMQFSGLTPSKFTLVGVLNACSNASAIVEG 401
            K+ V+W+ +I GY+Q G S  +  + LF  M+     P+  T  GV  A S       G
Sbjct: 68  NKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGG 127

Query: 400 KQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQLHEADIVLWTSMIAGYVQN 221
           +  H   +K+     VF+ ++L++MY K G T +ARK FD + E + V W +MI+GY   
Sbjct: 128 RLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQ 187

Query: 220 GENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGKQIHARTIKYGFGLELPIG 41
               EALGL+R M  E    NE    S+L A +    +  GKQIH   +K G    + +G
Sbjct: 188 KLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVG 247

Query: 40  SALSSMYTKCGNL 2
           +AL +MY KCG+L
Sbjct: 248 NALVTMYAKCGSL 260


>emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  411 bits (1056), Expect = e-112
 Identities = 203/271 (74%), Positives = 230/271 (84%)
 Frame = -2

Query: 814  EAVELFKIMRREERDESEFVFTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALV 635
            EA+ LF++MRREE  E+EFVFTSVLS+L   E V+  KQIHC+ VKNGLLS V+VGNALV
Sbjct: 192  EALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALV 251

Query: 634  TVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKF 455
            T+Y KCGSL++AL+ FE   +KNS+TWSAMITG AQ GDSDKAL+LFS M  SG+ PS+F
Sbjct: 252  TMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEF 311

Query: 454  TLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQL 275
            T VGV+NACS+  A  EGKQVHDYLLKLGFESQ+++ TALVDMYAKC    DARKGFD L
Sbjct: 312  TFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYL 371

Query: 274  HEADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGK 95
             E DIVLWTSMI GYVQNGENE+AL LY RMEMEGILPNELTMAS+LKACSSL ALEQGK
Sbjct: 372  QEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGK 431

Query: 94   QIHARTIKYGFGLELPIGSALSSMYTKCGNL 2
            QIHART+KYGFGLE+PIGSALS+MY KCG L
Sbjct: 432  QIHARTVKYGFGLEVPIGSALSTMYAKCGCL 462



 Score =  181 bits (460), Expect = 1e-43
 Identities = 93/239 (38%), Positives = 144/239 (60%)
 Frame = -2

Query: 814  EAVELFKIMRREERDESEFVFTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALV 635
            +A++LF  M       SEF F  V+++  D       KQ+H  ++K G  S + V  ALV
Sbjct: 293  KALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALV 352

Query: 634  TVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKF 455
             +Y KC S+ +A + F+ L E + V W++MI GY Q G+++ AL L+  M+  G+ P++ 
Sbjct: 353  DMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNEL 412

Query: 454  TLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQL 275
            T+  VL ACS+ +A+ +GKQ+H   +K GF  +V I +AL  MYAKCGC  D    F ++
Sbjct: 413  TMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRM 472

Query: 274  HEADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQG 98
               D++ W +MI+G  QNG  +EAL L+  M++EG  P+ +T  +IL ACS +  +E+G
Sbjct: 473  PARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERG 531



 Score =  168 bits (425), Expect = 2e-39
 Identities = 94/271 (34%), Positives = 152/271 (56%), Gaps = 2/271 (0%)
 Frame = -2

Query: 808 VELFKIMRREERDESEFVFTSVLSSLVDNEFVDVS--KQIHCLVVKNGLLSFVAVGNALV 635
           +ELF+ MR E    +   F  V ++   +  VD +  +  H + +K      V VG++L+
Sbjct: 93  MELFQRMRAENTAPNAHTFAGVFTAA--STLVDAAGGRLAHAVAIKMDSCRDVFVGSSLM 150

Query: 634 TVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKF 455
            +Y K G   EA + F+ + E+NSV+W+ MI+GYA    + +AL LF  M+      ++F
Sbjct: 151 NMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEF 210

Query: 454 TLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQL 275
               VL+A +    +  GKQ+H   +K G  S V +  ALV MYAKCG   DA + F+  
Sbjct: 211 VFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETS 270

Query: 274 HEADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGK 95
            + + + W++MI G  Q+G++++AL L+  M + GI P+E T   ++ ACS L A  +GK
Sbjct: 271 SDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGK 330

Query: 94  QIHARTIKYGFGLELPIGSALSSMYTKCGNL 2
           Q+H   +K GF  ++ + +AL  MY KC ++
Sbjct: 331 QVHDYLLKLGFESQIYVMTALVDMYAKCSSI 361



 Score =  155 bits (391), Expect = 1e-35
 Identities = 89/253 (35%), Positives = 131/253 (51%), Gaps = 2/253 (0%)
 Frame = -2

Query: 754 FTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALVTVYTKCGSLEEALRAFELLG 575
           F + L     N  +   K +H  ++K+   S V + N+LV +Y KC  L EA   FE + 
Sbjct: 9   FFTALLQYTHNRSLQKGKALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREAKFVFERIQ 67

Query: 574 EKNSVTWSAMITGYAQGGDSDKA--LRLFSEMQFSGLTPSKFTLVGVLNACSNASAIVEG 401
            K+ V+W+ +I GY+Q G S  +  + LF  M+     P+  T  GV  A S       G
Sbjct: 68  NKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGG 127

Query: 400 KQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQLHEADIVLWTSMIAGYVQN 221
           +  H   +K+     VF+ ++L++MY K G T +ARK FD + E + V W +MI+GY   
Sbjct: 128 RLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQ 187

Query: 220 GENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGKQIHARTIKYGFGLELPIG 41
               EALGL+R M  E    NE    S+L A +    +  GKQIH   +K G    + +G
Sbjct: 188 KLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVG 247

Query: 40  SALSSMYTKCGNL 2
           +AL +MY KCG+L
Sbjct: 248 NALVTMYAKCGSL 260


>ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223551321|gb|EEF52807.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score =  402 bits (1034), Expect = e-110
 Identities = 197/271 (72%), Positives = 233/271 (85%)
 Frame = -2

Query: 814  EAVELFKIMRREERDESEFVFTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALV 635
            EA E+F++MRREE D +EF FTSVLS+L   EFVD  KQIHCL VK GLL F+++ NALV
Sbjct: 195  EAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALV 254

Query: 634  TVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKF 455
            T+Y KCGSL+++L+ FE+  +KNS+TWSAMITGYAQ GDS KAL+LFS M F+G+ PS+F
Sbjct: 255  TMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEF 314

Query: 454  TLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQL 275
            TLVGVLNACS+A A+ EGKQVH+YLLKLGFESQ++I TALVDMYAK G T DARKGF+ L
Sbjct: 315  TLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYL 374

Query: 274  HEADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGK 95
             + D+VLWTSMIAGYVQNGENE+AL LY RM+MEGILPNELTMAS+LKACS+L A +QG+
Sbjct: 375  QQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGR 434

Query: 94   QIHARTIKYGFGLELPIGSALSSMYTKCGNL 2
            QIHARTIKYG GLE+ IGSALS+MY KCGNL
Sbjct: 435  QIHARTIKYGLGLEVTIGSALSTMYAKCGNL 465



 Score =  171 bits (434), Expect = 1e-40
 Identities = 93/267 (34%), Positives = 150/267 (56%)
 Frame = -2

Query: 808 VELFKIMRREERDESEFVFTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALVTV 629
           +ELF+ MR +    +   F+ + ++  +   +   +Q H + +K      V VG++L+ +
Sbjct: 96  MELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNM 155

Query: 628 YTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKFTL 449
           Y K G L EA   F+ + E+N VTW+ MI+GYA    + +A  +F  M+      ++F  
Sbjct: 156 YCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAF 215

Query: 448 VGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQLHE 269
             VL+A +    +  GKQ+H   +K G    + I  ALV MYAKCG   D+ + F+  ++
Sbjct: 216 TSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSND 275

Query: 268 ADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGKQI 89
            + + W++MI GY Q+G++ +AL L+ RM   GI P+E T+  +L ACS   A+E+GKQ+
Sbjct: 276 KNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQV 335

Query: 88  HARTIKYGFGLELPIGSALSSMYTKCG 8
           H   +K GF  +L I +AL  MY K G
Sbjct: 336 HNYLLKLGFESQLYIMTALVDMYAKSG 362



 Score =  169 bits (429), Expect = 5e-40
 Identities = 92/253 (36%), Positives = 146/253 (57%)
 Frame = -2

Query: 814  EAVELFKIMRREERDESEFVFTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALV 635
            +A++LF  M     + SEF    VL++  D   V+  KQ+H  ++K G  S + +  ALV
Sbjct: 296  KALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALV 355

Query: 634  TVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKF 455
             +Y K G  E+A + F  L + + V W++MI GY Q G+++ AL L+  MQ  G+ P++ 
Sbjct: 356  DMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNEL 415

Query: 454  TLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQL 275
            T+  VL ACSN +A  +G+Q+H   +K G   +V I +AL  MYAKCG   +    F ++
Sbjct: 416  TMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRM 475

Query: 274  HEADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGK 95
             E DI+ W +MI+G  QNG  +EAL L+  M  +   P+++T  ++L ACS +  ++ G 
Sbjct: 476  PERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSG- 534

Query: 94   QIHARTIKYGFGL 56
             ++ R +   FGL
Sbjct: 535  WLYFRMMFDEFGL 547



 Score =  139 bits (349), Expect = 1e-30
 Identities = 77/237 (32%), Positives = 128/237 (54%), Gaps = 3/237 (1%)
 Frame = -2

Query: 703 KQIHCLVVK-NGLLSFVAVGNALVTVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQ 527
           + +H  ++K     S + + N+L+  Y KC  L +A   F+ +  K+ ++W+ +I GY+Q
Sbjct: 27  RALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQ 86

Query: 526 GGDSDKA--LRLFSEMQFSGLTPSKFTLVGVLNACSNASAIVEGKQVHDYLLKLGFESQV 353
            G +  +  + LF  M+   + P+  T  G+  A SN S+I  G+Q H   +K+     V
Sbjct: 87  QGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDV 146

Query: 352 FIRTALVDMYAKCGCTCDARKGFDQLHEADIVLWTSMIAGYVQNGENEEALGLYRRMEME 173
           F+ ++L++MY K G   +AR+ FD++ E + V W +MI+GY       EA  ++  M  E
Sbjct: 147 FVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRRE 206

Query: 172 GILPNELTMASILKACSSLTALEQGKQIHARTIKYGFGLELPIGSALSSMYTKCGNL 2
               NE    S+L A +    ++ GKQIH   +K G  + L I +AL +MY KCG+L
Sbjct: 207 EEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSL 263


>ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  371 bits (953), Expect = e-101
 Identities = 182/271 (67%), Positives = 217/271 (80%)
 Frame = -2

Query: 814  EAVELFKIMRREERDESEFVFTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALV 635
            EA ELF +MRREE    +F++TSVLS+L   + V   KQIHCL +KNGLLS  +VGNALV
Sbjct: 197  EAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALV 256

Query: 634  TVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKF 455
            T+Y KCG L++AL+ FEL G+K+ +TWSAMITGYAQ GDS +AL LF  M  +G  PS+F
Sbjct: 257  TMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEF 316

Query: 454  TLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQL 275
            T VGV+NACS+  A+ EGKQ+H Y LK G+E Q++  TALVDMYAKCG   DARKGFD L
Sbjct: 317  TFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYL 376

Query: 274  HEADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGK 95
             E DIVLWTSMI+GY QNGENE AL LY RM+ME I+P+ELTMAS+L+ACSSL ALEQGK
Sbjct: 377  KEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGK 436

Query: 94   QIHARTIKYGFGLELPIGSALSSMYTKCGNL 2
            QIHA+TIKYGF LE+PIGSALS+MY KCG+L
Sbjct: 437  QIHAQTIKYGFSLEVPIGSALSTMYAKCGSL 467



 Score =  179 bits (454), Expect = 7e-43
 Identities = 97/269 (36%), Positives = 149/269 (55%)
 Frame = -2

Query: 808 VELFKIMRREERDESEFVFTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALVTV 629
           +ELF+ MR E    +   F+ V ++   +       Q H L +K      V VG++L+ +
Sbjct: 98  MELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINM 157

Query: 628 YTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKFTL 449
           Y K G + +A + F+ + E+N+V+W+ +I+GYA    + +A  LF  M+       KF  
Sbjct: 158 YCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIY 217

Query: 448 VGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQLHE 269
             VL+A +    +  GKQ+H   LK G  S   +  ALV MY KCGC  DA K F+   +
Sbjct: 218 TSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGD 277

Query: 268 ADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGKQI 89
            D + W++MI GY Q G++ EAL L+  M + G  P+E T   ++ ACS + ALE+GKQI
Sbjct: 278 KDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQI 337

Query: 88  HARTIKYGFGLELPIGSALSSMYTKCGNL 2
           H  ++K G+  ++   +AL  MY KCG+L
Sbjct: 338 HGYSLKAGYECQIYFMTALVDMYAKCGSL 366



 Score =  176 bits (445), Expect = 7e-42
 Identities = 96/253 (37%), Positives = 146/253 (57%)
 Frame = -2

Query: 814  EAVELFKIMRREERDESEFVFTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALV 635
            EA+ LF  M       SEF F  V+++  D   ++  KQIH   +K G    +    ALV
Sbjct: 298  EALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALV 357

Query: 634  TVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKF 455
             +Y KCGSL +A + F+ L E + V W++MI+GYAQ G+++ AL L+  MQ   + P + 
Sbjct: 358  DMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHEL 417

Query: 454  TLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQL 275
            T+  VL ACS+ +A+ +GKQ+H   +K GF  +V I +AL  MYAKCG   D    F ++
Sbjct: 418  TMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRM 477

Query: 274  HEADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGK 95
               DI+ W +MI+G  QNGE  +AL L+  +      P+ +T  ++L ACS +  +E+GK
Sbjct: 478  PSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGK 537

Query: 94   QIHARTIKYGFGL 56
             ++ R +   FG+
Sbjct: 538  -VYFRMMLDEFGI 549



 Score =  143 bits (360), Expect = 5e-32
 Identities = 84/253 (33%), Positives = 128/253 (50%), Gaps = 2/253 (0%)
 Frame = -2

Query: 754 FTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALVTVYTKCGSLEEALRAFELLG 575
           F  +L      + +   K IH  +++ G  S V + N+LV +Y KCGS+ +A   FE + 
Sbjct: 13  FVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESIT 72

Query: 574 EKNSVTWSAMITGYAQGGDSDKA--LRLFSEMQFSGLTPSKFTLVGVLNACSNASAIVEG 401
            K+ V+W+ +I GY+Q G    +  + LF  M+     P+  T  GV  A S++     G
Sbjct: 73  NKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGG 132

Query: 400 KQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQLHEADIVLWTSMIAGYVQN 221
            Q H   +K      VF+ ++L++MY K GC  DARK FD + E + V W ++I+GY   
Sbjct: 133 LQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAME 192

Query: 220 GENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGKQIHARTIKYGFGLELPIG 41
               EA  L+  M  E    ++    S+L A +    +  GKQIH   +K G      +G
Sbjct: 193 RMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVG 252

Query: 40  SALSSMYTKCGNL 2
           +AL +MY KCG L
Sbjct: 253 NALVTMYGKCGCL 265



 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 54/157 (34%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
 Frame = -2

Query: 472 LTPSKFTLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDAR 293
           L P   + V +L  C+    + +GK +H  LL+ G  S V++  +LV++YAKCG    A+
Sbjct: 6   LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65

Query: 292 KGFDQLHEADIVLWTSMIAGYVQNGE--NEEALGLYRRMEMEGILPNELTMASILKACSS 119
             F+ +   D+V W  +I GY Q G       + L++RM  E  LPN  T + +  A SS
Sbjct: 66  LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125

Query: 118 LTALEQGKQIHARTIKYGFGLELPIGSALSSMYTKCG 8
                 G Q HA  IK     ++ +GS+L +MY K G
Sbjct: 126 SPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIG 162


>ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355511418|gb|AES92560.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  371 bits (952), Expect = e-100
 Identities = 174/271 (64%), Positives = 226/271 (83%)
 Frame = -2

Query: 814  EAVELFKIMRREERDESEFVFTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALV 635
            +AVE+F++MRREE  ++EF  TSVLS+L  + FV   +Q+H L +KNGLL+ V+V NALV
Sbjct: 202  KAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALV 261

Query: 634  TVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKF 455
            T+Y KCGSL++A+R FE  G+KNS+TWSAM+TGYAQGGDSDKAL+LF++M  SG+ PS+F
Sbjct: 262  TMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEF 321

Query: 454  TLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQL 275
            TLVGV+NACS+  A+VEGKQ+H +  KLGF  Q+++ +A+VDMYAKCG   DARKGF+ +
Sbjct: 322  TLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECV 381

Query: 274  HEADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGK 95
             + D+VLWTS+I GYVQNG+ E  L LY +M+ME ++PNELTMAS+L+ACSSL AL+QGK
Sbjct: 382  QQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGK 441

Query: 94   QIHARTIKYGFGLELPIGSALSSMYTKCGNL 2
            Q+HAR IKYGF LE+PIGSALS+MYTKCG+L
Sbjct: 442  QMHARIIKYGFKLEVPIGSALSAMYTKCGSL 472



 Score =  191 bits (484), Expect = 2e-46
 Identities = 99/271 (36%), Positives = 161/271 (59%), Gaps = 1/271 (0%)
 Frame = -2

Query: 811 AVELFK-IMRREERDESEFVFTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALV 635
           A+ LF+ +MR      +      V S+  +   V   KQ H + VK G    V VG++L+
Sbjct: 101 AISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLL 160

Query: 634 TVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKF 455
            +Y K G + +A + F+ + E+N+V+W+ MI+GYA    +DKA+ +F  M+      ++F
Sbjct: 161 NMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEF 220

Query: 454 TLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQL 275
            L  VL+A ++   +  G+QVH   +K G  + V +  ALV MYAKCG   DA + F+  
Sbjct: 221 ALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFS 280

Query: 274 HEADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQGK 95
            + + + W++M+ GY Q G++++AL L+ +M   G+LP+E T+  ++ ACS L A+ +GK
Sbjct: 281 GDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGK 340

Query: 94  QIHARTIKYGFGLELPIGSALSSMYTKCGNL 2
           Q+H+   K GFGL+L + SA+  MY KCG+L
Sbjct: 341 QMHSFAFKLGFGLQLYVLSAVVDMYAKCGSL 371



 Score =  168 bits (425), Expect = 2e-39
 Identities = 88/239 (36%), Positives = 142/239 (59%)
 Frame = -2

Query: 814  EAVELFKIMRREERDESEFVFTSVLSSLVDNEFVDVSKQIHCLVVKNGLLSFVAVGNALV 635
            +A++LF  M       SEF    V+++  D   V   KQ+H    K G    + V +A+V
Sbjct: 303  KALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVV 362

Query: 634  TVYTKCGSLEEALRAFELLGEKNSVTWSAMITGYAQGGDSDKALRLFSEMQFSGLTPSKF 455
             +Y KCGSL +A + FE + + + V W+++ITGY Q GD +  L L+ +MQ   + P++ 
Sbjct: 363  DMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNEL 422

Query: 454  TLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKGFDQL 275
            T+  VL ACS+ +A+ +GKQ+H  ++K GF+ +V I +AL  MY KCG   D    F ++
Sbjct: 423  TMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRM 482

Query: 274  HEADIVLWTSMIAGYVQNGENEEALGLYRRMEMEGILPNELTMASILKACSSLTALEQG 98
               D++ W +MI+G  QNG   +AL L+ +M +EGI P+ +T  ++L ACS +  +++G
Sbjct: 483  PSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRG 541



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 6/159 (3%)
 Frame = -2

Query: 466 PSKFTLVGVLNACSNASAIVEGKQVHDYLLKLGFESQVFIRTALVDMYAKCGCTCDARKG 287
           P    L+  L  C++   I++G+ +H  +LK G  S +++    +++YAK      A   
Sbjct: 9   PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68

Query: 286 FDQL--HEADIVLWTSMIAGYVQNGENEE---ALGLYRR-MEMEGILPNELTMASILKAC 125
           FD +  ++ D V W S+I  + QN  +     A+ L+RR M    ++PN  T+A +  A 
Sbjct: 69  FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAA 128

Query: 124 SSLTALEQGKQIHARTIKYGFGLELPIGSALSSMYTKCG 8
           S+L+ +  GKQ H+  +K G   ++ +GS+L +MY K G
Sbjct: 129 SNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTG 167