BLASTX nr result

ID: Coptis21_contig00031507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031507
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA32518.1| endo-xyloglucan transferase (EXGT) [Nicotiana ta...   191   7e-47
sp|P93349.1|XTH_TOBAC RecName: Full=Probable xyloglucan endotran...   191   7e-47
ref|NP_001233858.1| probable xyloglucan endotransglucosylase/hyd...   184   5e-45
ref|XP_002304625.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
gb|ABM91069.1| xyloglucan endotransglycosylase/hydrolase precurs...   177   8e-43

>dbj|BAA32518.1| endo-xyloglucan transferase (EXGT) [Nicotiana tabacum]
          Length = 295

 Score =  191 bits (484), Expect = 7e-47
 Identities = 82/100 (82%), Positives = 89/100 (89%)
 Frame = +2

Query: 2   NADDWATRGGLEKTDWSKAPFIASYTSFHVDGCDATTPQSAQVCSTTGMKWWDQKAFQDL 181
           +ADDWATRGGLEKTDWS APF ASYTSFHVDGC+A TPQ  QVC+T GM+WWDQKAFQDL
Sbjct: 196 DADDWATRGGLEKTDWSNAPFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDL 255

Query: 182 DGLQYRRLGWVRKKYTIYNYCTDRSRYTTVPPECVRDRDI 301
           D LQYRRL WVR+KYTIYNYCTDR RY T+PPEC +DRDI
Sbjct: 256 DALQYRRLRWVRQKYTIYNYCTDRKRYPTLPPECTKDRDI 295


>sp|P93349.1|XTH_TOBAC RecName: Full=Probable xyloglucan endotransglucosylase/hydrolase
           protein; Flags: Precursor gi|1498168|dbj|BAA13163.1|
           endoxyloglucan transferase related protein [Nicotiana
           tabacum]
          Length = 295

 Score =  191 bits (484), Expect = 7e-47
 Identities = 82/100 (82%), Positives = 89/100 (89%)
 Frame = +2

Query: 2   NADDWATRGGLEKTDWSKAPFIASYTSFHVDGCDATTPQSAQVCSTTGMKWWDQKAFQDL 181
           +ADDWATRGGLEKTDWS APF ASYTSFHVDGC+A TPQ  QVC+T GM+WWDQKAFQDL
Sbjct: 196 DADDWATRGGLEKTDWSNAPFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDL 255

Query: 182 DGLQYRRLGWVRKKYTIYNYCTDRSRYTTVPPECVRDRDI 301
           D LQYRRL WVR+KYTIYNYCTDR RY T+PPEC +DRDI
Sbjct: 256 DALQYRRLRWVRQKYTIYNYCTDRKRYPTLPPECTKDRDI 295


>ref|NP_001233858.1| probable xyloglucan endotransglucosylase/hydrolase 1 precursor
           [Solanum lycopersicum]
           gi|38605155|sp|Q40144.1|XTH1_SOLLC RecName:
           Full=Probable xyloglucan endotransglucosylase/hydrolase
           1; Short=LeXTH1; Flags: Precursor
           gi|469509|dbj|BAA03923.1| endo-xyloglucan transferase
           [Solanum lycopersicum]
          Length = 296

 Score =  184 bits (468), Expect = 5e-45
 Identities = 78/100 (78%), Positives = 88/100 (88%)
 Frame = +2

Query: 2   NADDWATRGGLEKTDWSKAPFIASYTSFHVDGCDATTPQSAQVCSTTGMKWWDQKAFQDL 181
           +ADDWATRGGLEKT+W+ APF ASYTSFHVDGC+A TPQ  QVC+T GMKWWDQKAFQDL
Sbjct: 197 DADDWATRGGLEKTNWANAPFTASYTSFHVDGCEAATPQEVQVCNTKGMKWWDQKAFQDL 256

Query: 182 DGLQYRRLGWVRKKYTIYNYCTDRSRYTTVPPECVRDRDI 301
           D LQYRRL WVR+KYT+YNYCTD++RY   PPEC +DRDI
Sbjct: 257 DALQYRRLRWVRQKYTVYNYCTDKARYPVPPPECTKDRDI 296


>ref|XP_002304625.1| predicted protein [Populus trichocarpa] gi|222842057|gb|EEE79604.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  178 bits (451), Expect = 5e-43
 Identities = 79/100 (79%), Positives = 87/100 (87%)
 Frame = +2

Query: 2   NADDWATRGGLEKTDWSKAPFIASYTSFHVDGCDATTPQSAQVCSTTGMKWWDQKAFQDL 181
           NADDWATRGGLEKTDWSKAPFIASY SFHVDGC+A+    A+ C+T G +WWDQK FQDL
Sbjct: 197 NADDWATRGGLEKTDWSKAPFIASYRSFHVDGCEASV--EAKFCATQGARWWDQKEFQDL 254

Query: 182 DGLQYRRLGWVRKKYTIYNYCTDRSRYTTVPPECVRDRDI 301
           D LQYRRL WVR+KYTIYNYCTDRSRY ++PPEC RDRDI
Sbjct: 255 DALQYRRLSWVRQKYTIYNYCTDRSRYPSMPPECKRDRDI 294


>gb|ABM91069.1| xyloglucan endotransglycosylase/hydrolase precursor XTH-27 [Populus
           trichocarpa]
          Length = 293

 Score =  177 bits (449), Expect = 8e-43
 Identities = 78/100 (78%), Positives = 87/100 (87%)
 Frame = +2

Query: 2   NADDWATRGGLEKTDWSKAPFIASYTSFHVDGCDATTPQSAQVCSTTGMKWWDQKAFQDL 181
           NADDWATRGGLEKTDWSKAPFIASY SFH+DGC+A+    A+ C+T G +WWDQK FQDL
Sbjct: 196 NADDWATRGGLEKTDWSKAPFIASYKSFHIDGCEASV--EAKFCATQGTRWWDQKEFQDL 253

Query: 182 DGLQYRRLGWVRKKYTIYNYCTDRSRYTTVPPECVRDRDI 301
           D LQYRRL WVR+KYTIYNYCTDRSRY ++PPEC RDRDI
Sbjct: 254 DALQYRRLRWVRQKYTIYNYCTDRSRYASLPPECKRDRDI 293


Top