BLASTX nr result

ID: Coptis21_contig00030997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030997
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517073.1| conserved hypothetical protein [Ricinus comm...    86   2e-15
emb|CBI25038.3| unnamed protein product [Vitis vinifera]               82   3e-14
ref|XP_002306794.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_003634991.1| PREDICTED: protein TIFY 4B-like [Vitis vinif...    77   1e-12
ref|XP_004145394.1| PREDICTED: protein TIFY 4B-like [Cucumis sat...    75   7e-12

>ref|XP_002517073.1| conserved hypothetical protein [Ricinus communis]
           gi|223543708|gb|EEF45236.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 335

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/112 (43%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
 Frame = +1

Query: 46  VAENSQHYKEDVTLCREVEPEGPISRKASVQRYLEKRKDRGRFKNKRKIGV-STSLEMYL 222
           V E SQ  +E   +  + + EG  +RK S+QRYLEK+KDRGRFK ++ +G  S+SL+ YL
Sbjct: 222 VTEYSQQCREKGNVTYDHDVEGQANRKMSLQRYLEKKKDRGRFKGRKNLGPNSSSLDAYL 281

Query: 223 NHQVRDHYPNEQSSQSRACXXXXXXXXXXXXXXNSVENQAKNFVFPIDLNEN 378
           NHQ+R H  NEQS  +R+               NS E+Q K   F +DLNE+
Sbjct: 282 NHQMRTHISNEQS--TRSSTSSPTQPGVPHTSSNSAEDQLKTASFAVDLNED 331


>emb|CBI25038.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 5/114 (4%)
 Frame = +1

Query: 46  VAENSQHYKEDVTLCREVE---PEGPISRKASVQRYLEKRKDRGRFKNKRKIGV--STSL 210
           + EN Q ++E+  + RE      E P SRKASVQRYLEKRKD  RFK+K++ G+  S  L
Sbjct: 223 MTENCQLHREESNIFREDNHPAAEVPTSRKASVQRYLEKRKD--RFKSKKRGGMPSSAGL 280

Query: 211 EMYLNHQVRDHYPNEQSSQSRACXXXXXXXXXXXXXXNSVENQAKNFVFPIDLN 372
           ++YLNH+V D  PN+QS+QS AC              + VEN  K+     DLN
Sbjct: 281 DIYLNHRVGDQIPNDQSNQSDACSLSHCRAHHIPTPCSLVENMTKHTNLSADLN 334


>ref|XP_002306794.1| predicted protein [Populus trichocarpa] gi|222856243|gb|EEE93790.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
 Frame = +1

Query: 49  AENSQHYKEDVTLCREVEPEGPISRKASVQRYLEKRKDRGRFKNKRKIGV-STSLEMYLN 225
           A++ Q   E+  + RE   EG  SRKAS+QRY EK+KD  RFKNKRK+ V S SL+++L+
Sbjct: 242 ADSGQLLWEESNIAREDNLEGSTSRKASLQRYFEKKKD--RFKNKRKVAVPSASLDVFLS 299

Query: 226 HQVRDHYPNEQSSQSRACXXXXXXXXXXXXXXNSVENQAKNFVFPIDLN 372
           H V D   N+  + + AC              NSV+N AKN +   DLN
Sbjct: 300 HLVGDQISNDHWNLNDACSPSQPRPPQTPNRCNSVDNVAKNGILKADLN 348


>ref|XP_003634991.1| PREDICTED: protein TIFY 4B-like [Vitis vinifera]
          Length = 111

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
 Frame = +1

Query: 106 EGPISRKASVQRYLEKRKDRGRFKNKRKIGV--STSLEMYLNHQVRDHYPNEQSSQSRAC 279
           E P SRKASVQRYLEKRKD  RFK+K++ G+  S  L++YLNH+V D  PN+QS+QS AC
Sbjct: 16  EVPTSRKASVQRYLEKRKD--RFKSKKRGGMPSSAGLDIYLNHRVGDQIPNDQSNQSDAC 73

Query: 280 XXXXXXXXXXXXXXNSVENQAKNFVFPIDLN 372
                         + VEN  K+     DLN
Sbjct: 74  SLSHCRAHHIPTPCSLVENMTKHTNLSADLN 104


>ref|XP_004145394.1| PREDICTED: protein TIFY 4B-like [Cucumis sativus]
           gi|449494857|ref|XP_004159666.1| PREDICTED: protein TIFY
           4B-like [Cucumis sativus]
          Length = 336

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
 Frame = +1

Query: 52  ENSQHYKEDVTLCREVEPEGPISRKASVQRYLEKRKDRGRFKNKRKIGVST-SLEMYLNH 228
           +  QH K   T  R+ + EG  SRK S+QRYLEKRKDRGR KNK+  G+S+ SLE Y+NH
Sbjct: 226 QQQQHAKG--TSMRDSDVEGQASRKVSLQRYLEKRKDRGRLKNKKNTGLSSPSLEGYMNH 283

Query: 229 QVRDHYPNEQSSQSRACXXXXXXXXXXXXXXNSVENQAKNFVFPIDLN 372
           Q+R H  N+   Q                     +NQ K   F +DLN
Sbjct: 284 QMRTHISNKNLGQ--IVTSSLSPTGVAKAFVGPADNQPKLACFSVDLN 329


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