BLASTX nr result

ID: Coptis21_contig00030990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030990
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21444.3| unnamed protein product [Vitis vinifera]              172   2e-41
ref|XP_002277305.1| PREDICTED: patatin group A-3-like [Vitis vin...   172   2e-41
ref|XP_003549404.1| PREDICTED: LOW QUALITY PROTEIN: patatin grou...   169   3e-40
ref|XP_002327118.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
gb|AAF98368.1|AF158027_1 patatin-like protein 1 [Nicotiana tabacum]   166   2e-39

>emb|CBI21444.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  172 bits (437), Expect = 2e-41
 Identities = 82/109 (75%), Positives = 94/109 (86%)
 Frame = +3

Query: 3   ALDARLSDICISTSAAPTYLPAHYFENIDLQGNSIEFNLVDGGVVANNPALVAISEVTKQ 182
           ALDA+LSDICI TSAAPTYLPAHYFEN D Q N+ EFNL+DGG+ ANNP LVAISEVTKQ
Sbjct: 177 ALDAKLSDICIGTSAAPTYLPAHYFENQDDQENNEEFNLIDGGLAANNPCLVAISEVTKQ 236

Query: 183 ILHENSDFAPIQPMDYTRFLVISLGTGAAKTQEKYDASMAAKWGILGWL 329
           + ++N DF PI+PMDY RFLVIS+GTG+AK + KY A MAAKWG+LGWL
Sbjct: 237 VFNKNPDFFPIKPMDYGRFLVISVGTGSAKEEYKYTAKMAAKWGVLGWL 285


>ref|XP_002277305.1| PREDICTED: patatin group A-3-like [Vitis vinifera]
          Length = 407

 Score =  172 bits (437), Expect = 2e-41
 Identities = 82/109 (75%), Positives = 94/109 (86%)
 Frame = +3

Query: 3   ALDARLSDICISTSAAPTYLPAHYFENIDLQGNSIEFNLVDGGVVANNPALVAISEVTKQ 182
           ALDA+LSDICI TSAAPTYLPAHYFEN D Q N+ EFNL+DGG+ ANNP LVAISEVTKQ
Sbjct: 177 ALDAKLSDICIGTSAAPTYLPAHYFENQDDQENNEEFNLIDGGLAANNPCLVAISEVTKQ 236

Query: 183 ILHENSDFAPIQPMDYTRFLVISLGTGAAKTQEKYDASMAAKWGILGWL 329
           + ++N DF PI+PMDY RFLVIS+GTG+AK + KY A MAAKWG+LGWL
Sbjct: 237 VFNKNPDFFPIKPMDYGRFLVISVGTGSAKEEYKYTAKMAAKWGVLGWL 285


>ref|XP_003549404.1| PREDICTED: LOW QUALITY PROTEIN: patatin group A-3-like [Glycine
           max]
          Length = 396

 Score =  169 bits (427), Expect = 3e-40
 Identities = 78/109 (71%), Positives = 95/109 (87%)
 Frame = +3

Query: 6   LDARLSDICISTSAAPTYLPAHYFENIDLQGNSIEFNLVDGGVVANNPALVAISEVTKQI 185
           +DA+LSDICISTSAAPTYLPAH F N D +GN  EFNL+DGGV ANNP LVA++EVTKQI
Sbjct: 166 MDAKLSDICISTSAAPTYLPAHNFNNHDSKGNVHEFNLIDGGVCANNPTLVAMNEVTKQI 225

Query: 186 LHENSDFAPIQPMDYTRFLVISLGTGAAKTQEKYDASMAAKWGILGWLT 332
           + +NSDF PI+PM+Y RFL+IS+GTG +KT+EK++A MAAKWG+L WLT
Sbjct: 226 IKQNSDFFPIKPMEYGRFLIISIGTGTSKTEEKFNAQMAAKWGLLDWLT 274


>ref|XP_002327118.1| predicted protein [Populus trichocarpa] gi|222835433|gb|EEE73868.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  167 bits (423), Expect = 8e-40
 Identities = 80/110 (72%), Positives = 89/110 (80%)
 Frame = +3

Query: 9   DARLSDICISTSAAPTYLPAHYFENIDLQGNSIEFNLVDGGVVANNPALVAISEVTKQIL 188
           DA LSDICI TSAAPTYLPAHYFE  D  G   EFNL+DGGV ANNP LVA+SEV+K+I 
Sbjct: 185 DALLSDICIGTSAAPTYLPAHYFETKDPSGKVREFNLIDGGVAANNPTLVAVSEVSKEIT 244

Query: 189 HENSDFAPIQPMDYTRFLVISLGTGAAKTQEKYDASMAAKWGILGWLTAD 338
            +N DF P  PMDY RFLV+SLGTG AK++EKYDA  AAKWGILGWLT+D
Sbjct: 245 RKNPDFFPTAPMDYGRFLVLSLGTGTAKSEEKYDADEAAKWGILGWLTSD 294


>gb|AAF98368.1|AF158027_1 patatin-like protein 1 [Nicotiana tabacum]
          Length = 420

 Score =  166 bits (420), Expect = 2e-39
 Identities = 79/107 (73%), Positives = 94/107 (87%)
 Frame = +3

Query: 9   DARLSDICISTSAAPTYLPAHYFENIDLQGNSIEFNLVDGGVVANNPALVAISEVTKQIL 188
           DA+LSDICISTSAAPTYLPAHYF+  D +GN  E +L+DGGV ANNPAL+AISEV+K+IL
Sbjct: 182 DAKLSDICISTSAAPTYLPAHYFKVEDTKGNVKEHHLIDGGVAANNPALIAISEVSKEIL 241

Query: 189 HENSDFAPIQPMDYTRFLVISLGTGAAKTQEKYDASMAAKWGILGWL 329
            +NSDF PI+PMDY RFLVIS+GTG+AK + KY+ASMAAKWGI+ WL
Sbjct: 242 KDNSDFFPIKPMDYGRFLVISIGTGSAKWEHKYNASMAAKWGIVNWL 288


Top