BLASTX nr result

ID: Coptis21_contig00030989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030989
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15033.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase A...    91   7e-17
emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Ara...    81   1e-13
sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kin...    81   1e-13
ref|NP_190402.6| serine/threonine-protein kinase [Arabidopsis th...    81   1e-13

>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
          Length = 3085

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/102 (54%), Positives = 67/102 (65%)
 Frame = +2

Query: 2   WVLRSLDELSSIQLLPGLGVEASQCLSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXX 181
           W LRSL E SS  LLP LG E     S   NE  +GW T+WS L+H LPIFSN+T     
Sbjct: 441 WTLRSLQEFSSELLLPVLGAEMLMRPSFTSNEFDNGWHTIWSCLMHGLPIFSNITSVVDA 500

Query: 182 XXXXXXNIISKELVNLPIVPQDIWELRLFMHMPSVSALYFLS 307
                 NI+S +L++ PIVPQ+IW+LRLF HMPSVS LYF+S
Sbjct: 501 ALVLLGNIVSNDLISTPIVPQEIWDLRLFKHMPSVSVLYFIS 542


>ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera]
          Length = 2956

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 39/77 (50%), Positives = 52/77 (67%)
 Frame = +2

Query: 77  LSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXXXXXXXXNIISKELVNLPIVPQDIWE 256
           +     +  +GW T+WS L+H LPIFSN+T           NI+S +L++ PIVPQ+IW+
Sbjct: 397 METSRGQFDNGWHTIWSCLMHGLPIFSNITSVVDAALVLLGNIVSNDLISTPIVPQEIWD 456

Query: 257 LRLFMHMPSVSALYFLS 307
           LRLF HMPSVS LYF+S
Sbjct: 457 LRLFKHMPSVSVLYFIS 473


>emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana]
          Length = 3856

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/102 (39%), Positives = 62/102 (60%)
 Frame = +2

Query: 2    WVLRSLDELSSIQLLPGLGVEASQCLSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXX 181
            W LRSL  LSS   LP + ++ S+  S   +EL  GW ++WSSL+H L  FS+++     
Sbjct: 1251 WTLRSLQGLSSGLSLPDITMDISKS-SASSSELDRGWQSIWSSLIHGLATFSSMSVIVDA 1309

Query: 182  XXXXXXNIISKELVNLPIVPQDIWELRLFMHMPSVSALYFLS 307
                  +IIS   + + I+PQ++W+ +LF H+PS  ALYF++
Sbjct: 1310 VLVLLGSIISSNHITVKILPQEVWDHQLFRHIPSEPALYFIA 1351


>sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kinase ATM; AltName:
            Full=Ataxia telangiectasia mutated homolog; Short=AtATM
            gi|7960715|emb|CAB92122.1| AtATM [Arabidopsis thaliana]
          Length = 3856

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/102 (39%), Positives = 62/102 (60%)
 Frame = +2

Query: 2    WVLRSLDELSSIQLLPGLGVEASQCLSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXX 181
            W LRSL  LSS   LP + ++ S+  S   +EL  GW ++WSSL+H L  FS+++     
Sbjct: 1251 WTLRSLQGLSSGLSLPDITMDISKS-SASSSELDRGWQSIWSSLIHGLATFSSMSVIVDA 1309

Query: 182  XXXXXXNIISKELVNLPIVPQDIWELRLFMHMPSVSALYFLS 307
                  +IIS   + + I+PQ++W+ +LF H+PS  ALYF++
Sbjct: 1310 VLVLLGSIISSNHITVKILPQEVWDHQLFRHIPSEPALYFIA 1351


>ref|NP_190402.6| serine/threonine-protein kinase [Arabidopsis thaliana]
            gi|332644858|gb|AEE78379.1| serine/threonine-protein
            kinase [Arabidopsis thaliana]
          Length = 3845

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/102 (39%), Positives = 62/102 (60%)
 Frame = +2

Query: 2    WVLRSLDELSSIQLLPGLGVEASQCLSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXX 181
            W LRSL  LSS   LP + ++ S+  S   +EL  GW ++WSSL+H L  FS+++     
Sbjct: 1251 WTLRSLQGLSSGLSLPDITMDISKS-SASSSELDRGWQSIWSSLIHGLATFSSMSVIVDA 1309

Query: 182  XXXXXXNIISKELVNLPIVPQDIWELRLFMHMPSVSALYFLS 307
                  +IIS   + + I+PQ++W+ +LF H+PS  ALYF++
Sbjct: 1310 VLVLLGSIISSNHITVKILPQEVWDHQLFRHIPSEPALYFIA 1351


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