BLASTX nr result
ID: Coptis21_contig00030989
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030989 (307 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI15033.3| unnamed protein product [Vitis vinifera] 115 5e-24 ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase A... 91 7e-17 emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Ara... 81 1e-13 sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kin... 81 1e-13 ref|NP_190402.6| serine/threonine-protein kinase [Arabidopsis th... 81 1e-13 >emb|CBI15033.3| unnamed protein product [Vitis vinifera] Length = 3085 Score = 115 bits (287), Expect = 5e-24 Identities = 56/102 (54%), Positives = 67/102 (65%) Frame = +2 Query: 2 WVLRSLDELSSIQLLPGLGVEASQCLSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXX 181 W LRSL E SS LLP LG E S NE +GW T+WS L+H LPIFSN+T Sbjct: 441 WTLRSLQEFSSELLLPVLGAEMLMRPSFTSNEFDNGWHTIWSCLMHGLPIFSNITSVVDA 500 Query: 182 XXXXXXNIISKELVNLPIVPQDIWELRLFMHMPSVSALYFLS 307 NI+S +L++ PIVPQ+IW+LRLF HMPSVS LYF+S Sbjct: 501 ALVLLGNIVSNDLISTPIVPQEIWDLRLFKHMPSVSVLYFIS 542 >ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera] Length = 2956 Score = 91.3 bits (225), Expect = 7e-17 Identities = 39/77 (50%), Positives = 52/77 (67%) Frame = +2 Query: 77 LSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXXXXXXXXNIISKELVNLPIVPQDIWE 256 + + +GW T+WS L+H LPIFSN+T NI+S +L++ PIVPQ+IW+ Sbjct: 397 METSRGQFDNGWHTIWSCLMHGLPIFSNITSVVDAALVLLGNIVSNDLISTPIVPQEIWD 456 Query: 257 LRLFMHMPSVSALYFLS 307 LRLF HMPSVS LYF+S Sbjct: 457 LRLFKHMPSVSVLYFIS 473 >emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana] Length = 3856 Score = 80.9 bits (198), Expect = 1e-13 Identities = 40/102 (39%), Positives = 62/102 (60%) Frame = +2 Query: 2 WVLRSLDELSSIQLLPGLGVEASQCLSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXX 181 W LRSL LSS LP + ++ S+ S +EL GW ++WSSL+H L FS+++ Sbjct: 1251 WTLRSLQGLSSGLSLPDITMDISKS-SASSSELDRGWQSIWSSLIHGLATFSSMSVIVDA 1309 Query: 182 XXXXXXNIISKELVNLPIVPQDIWELRLFMHMPSVSALYFLS 307 +IIS + + I+PQ++W+ +LF H+PS ALYF++ Sbjct: 1310 VLVLLGSIISSNHITVKILPQEVWDHQLFRHIPSEPALYFIA 1351 >sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kinase ATM; AltName: Full=Ataxia telangiectasia mutated homolog; Short=AtATM gi|7960715|emb|CAB92122.1| AtATM [Arabidopsis thaliana] Length = 3856 Score = 80.9 bits (198), Expect = 1e-13 Identities = 40/102 (39%), Positives = 62/102 (60%) Frame = +2 Query: 2 WVLRSLDELSSIQLLPGLGVEASQCLSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXX 181 W LRSL LSS LP + ++ S+ S +EL GW ++WSSL+H L FS+++ Sbjct: 1251 WTLRSLQGLSSGLSLPDITMDISKS-SASSSELDRGWQSIWSSLIHGLATFSSMSVIVDA 1309 Query: 182 XXXXXXNIISKELVNLPIVPQDIWELRLFMHMPSVSALYFLS 307 +IIS + + I+PQ++W+ +LF H+PS ALYF++ Sbjct: 1310 VLVLLGSIISSNHITVKILPQEVWDHQLFRHIPSEPALYFIA 1351 >ref|NP_190402.6| serine/threonine-protein kinase [Arabidopsis thaliana] gi|332644858|gb|AEE78379.1| serine/threonine-protein kinase [Arabidopsis thaliana] Length = 3845 Score = 80.9 bits (198), Expect = 1e-13 Identities = 40/102 (39%), Positives = 62/102 (60%) Frame = +2 Query: 2 WVLRSLDELSSIQLLPGLGVEASQCLSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXX 181 W LRSL LSS LP + ++ S+ S +EL GW ++WSSL+H L FS+++ Sbjct: 1251 WTLRSLQGLSSGLSLPDITMDISKS-SASSSELDRGWQSIWSSLIHGLATFSSMSVIVDA 1309 Query: 182 XXXXXXNIISKELVNLPIVPQDIWELRLFMHMPSVSALYFLS 307 +IIS + + I+PQ++W+ +LF H+PS ALYF++ Sbjct: 1310 VLVLLGSIISSNHITVKILPQEVWDHQLFRHIPSEPALYFIA 1351