BLASTX nr result

ID: Coptis21_contig00030983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030983
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW79527.1| hypothetical protein ZEAMMB73_237868 [Zea mays]         76   2e-12
gb|AFW79525.1| hypothetical protein ZEAMMB73_237868 [Zea mays] g...    76   2e-12
gb|ACN25952.1| unknown [Zea mays] gi|414877058|tpg|DAA54189.1| T...    76   2e-12
ref|NP_001149870.1| COP9 signalosome complex subunit 2 [Zea mays...    76   2e-12
ref|XP_002330981.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12

>gb|AFW79527.1| hypothetical protein ZEAMMB73_237868 [Zea mays]
          Length = 221

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 116 YYNSKGLVETDPAGALAGFSQVVSMEPDKAEWGFKALK 3
           YYNSKGLVETDP GALAGF QVVSMEP+KAEWGFKALK
Sbjct: 30  YYNSKGLVETDPEGALAGFDQVVSMEPEKAEWGFKALK 67


>gb|AFW79525.1| hypothetical protein ZEAMMB73_237868 [Zea mays]
           gi|413946877|gb|AFW79526.1| hypothetical protein
           ZEAMMB73_237868 [Zea mays]
          Length = 438

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 116 YYNSKGLVETDPAGALAGFSQVVSMEPDKAEWGFKALK 3
           YYNSKGLVETDP GALAGF QVVSMEP+KAEWGFKALK
Sbjct: 30  YYNSKGLVETDPEGALAGFDQVVSMEPEKAEWGFKALK 67


>gb|ACN25952.1| unknown [Zea mays] gi|414877058|tpg|DAA54189.1| TPA: COP9
           signalosome complex subunit 2 [Zea mays]
          Length = 438

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 116 YYNSKGLVETDPAGALAGFSQVVSMEPDKAEWGFKALK 3
           YYNSKGLVETDP GALAGF QVVSMEP+KAEWGFKALK
Sbjct: 30  YYNSKGLVETDPEGALAGFDQVVSMEPEKAEWGFKALK 67


>ref|NP_001149870.1| COP9 signalosome complex subunit 2 [Zea mays]
           gi|195635167|gb|ACG37052.1| COP9 signalosome complex
           subunit 2 [Zea mays]
          Length = 438

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 116 YYNSKGLVETDPAGALAGFSQVVSMEPDKAEWGFKALK 3
           YYNSKGLVETDP GALAGF QVVSMEP+KAEWGFKALK
Sbjct: 30  YYNSKGLVETDPEGALAGFDQVVSMEPEKAEWGFKALK 67


>ref|XP_002330981.1| predicted protein [Populus trichocarpa] gi|222872773|gb|EEF09904.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/38 (89%), Positives = 37/38 (97%)
 Frame = -2

Query: 116 YYNSKGLVETDPAGALAGFSQVVSMEPDKAEWGFKALK 3
           YYNSKGLVETDP GALAGF++VVSMEP+KAEWGFKALK
Sbjct: 30  YYNSKGLVETDPEGALAGFAEVVSMEPEKAEWGFKALK 67


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