BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030971
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307519.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002512853.1| ATP-dependent clp protease, putative [Ricinu...   127   7e-28
ref|YP_004167306.1| ATP-dependent clp protease, ATP-binding subu...   126   2e-27
ref|YP_004662821.1| ATP-dependent chaperone ClpB [Zymomonas mobi...   124   6e-27
ref|ZP_07661744.1| ATP-dependent Clp protease ATP-binding subuni...   124   6e-27

>ref|XP_002307519.1| predicted protein [Populus trichocarpa] gi|222856968|gb|EEE94515.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/102 (61%), Positives = 80/102 (78%)
 Frame = +3

Query: 18  VQGKQDQIIGRQEQIQCVMQILCKRRKNNPCLRGEPGVGKTQIAEGLALRIVNNADIPEK 197
           +QGK DQ++GR++QI+ V QILCKRRKNNPCL G+PGVGKT I EGLA  IV    +P K
Sbjct: 60  LQGKLDQVVGRRKQIERVTQILCKRRKNNPCLVGDPGVGKTVIVEGLAANIVKGT-VPSK 118

Query: 198 FRENKVFSIDMGRLLAGTSYRGDFEERLMGVVDEVRESNGAI 323
               K+F++DM RL+AGT + GDFEERL G+VDEV++S+G I
Sbjct: 119 LEGKKIFALDMARLVAGTKFHGDFEERLTGIVDEVKQSDGNI 160


>ref|XP_002512853.1| ATP-dependent clp protease, putative [Ricinus communis]
           gi|223547864|gb|EEF49356.1| ATP-dependent clp protease,
           putative [Ricinus communis]
          Length = 234

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/101 (59%), Positives = 79/101 (78%)
 Frame = +3

Query: 21  QGKQDQIIGRQEQIQCVMQILCKRRKNNPCLRGEPGVGKTQIAEGLALRIVNNADIPEKF 200
           + K D + GRQ Q++ +MQ+LCKRRKNNPCL G+PGVGKT + EGLA++IV NA  P K 
Sbjct: 22  EAKLDPLFGRQHQLEQIMQVLCKRRKNNPCLIGDPGVGKTAVVEGLAMKIV-NATAPPKL 80

Query: 201 RENKVFSIDMGRLLAGTSYRGDFEERLMGVVDEVRESNGAI 323
           +  KVF++DMGRL+AGT +RG+FE RL+ VVDEV+  +G I
Sbjct: 81  QGKKVFALDMGRLVAGTIFRGEFERRLVKVVDEVKAGDGGI 121


>ref|YP_004167306.1| ATP-dependent clp protease, ATP-binding subunit clpa
           [Nitratifractor salsuginis DSM 16511]
           gi|319418447|gb|ADV45557.1| ATP-dependent Clp protease,
           ATP-binding subunit clpA [Nitratifractor salsuginis DSM
           16511]
          Length = 733

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/101 (58%), Positives = 82/101 (81%)
 Frame = +3

Query: 21  QGKQDQIIGRQEQIQCVMQILCKRRKNNPCLRGEPGVGKTQIAEGLALRIVNNADIPEKF 200
           +GK D +IGR+E+I+ VMQ LC+R+KNNP L GEPGVGKT IAEGLAL+I    ++PE  
Sbjct: 172 EGKIDPVIGREEEIERVMQTLCRRKKNNPLLVGEPGVGKTAIAEGLALKIA-EGEVPEAI 230

Query: 201 RENKVFSIDMGRLLAGTSYRGDFEERLMGVVDEVRESNGAI 323
           +E++++++DMG L+AGT YRGDFE+RL GV++E+R+   AI
Sbjct: 231 KESRIYALDMGALVAGTKYRGDFEKRLKGVIEELRKVPEAI 271


>ref|YP_004662821.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. pomaceae
           ATCC 29192] gi|336295424|gb|AEI38531.1| ATP-dependent
           chaperone ClpB [Zymomonas mobilis subsp. pomaceae ATCC
           29192]
          Length = 864

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/101 (60%), Positives = 78/101 (77%)
 Frame = +3

Query: 21  QGKQDQIIGRQEQIQCVMQILCKRRKNNPCLRGEPGVGKTQIAEGLALRIVNNADIPEKF 200
           +GK D +IGR E+I+  +QIL +R KNNP L GEPGVGKT I EGLALRIV N D+PE  
Sbjct: 177 EGKLDPVIGRDEEIRRTVQILARRTKNNPVLIGEPGVGKTAIVEGLALRIV-NGDVPEGL 235

Query: 201 RENKVFSIDMGRLLAGTSYRGDFEERLMGVVDEVRESNGAI 323
           R+  + ++DMG L+AG  YRG+FEERL GV+DEV++S+G I
Sbjct: 236 RDRVLMALDMGSLIAGAKYRGEFEERLKGVLDEVKQSDGQI 276


>ref|ZP_07661744.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Roseibium sp.
           TrichSKD4] gi|307770073|gb|EFO29299.1| ATP-dependent Clp
           protease ATP-binding subunit ClpA [Roseibium sp.
           TrichSKD4]
          Length = 824

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/100 (62%), Positives = 75/100 (75%)
 Frame = +3

Query: 24  GKQDQIIGRQEQIQCVMQILCKRRKNNPCLRGEPGVGKTQIAEGLALRIVNNADIPEKFR 203
           GK D +IGR  +I   +QILC+R KNNP   G+PGVGKT IAEGLALRIVN  D+P+  +
Sbjct: 197 GKVDPLIGRDTEISRTIQILCRRSKNNPLFVGDPGVGKTAIAEGLALRIVNE-DVPDVLK 255

Query: 204 ENKVFSIDMGRLLAGTSYRGDFEERLMGVVDEVRESNGAI 323
            N +FS+DMG LLAGT YRGDFEERL  VV E+ E +GA+
Sbjct: 256 GNTIFSLDMGSLLAGTRYRGDFEERLKQVVKEIEEFDGAV 295