BLASTX nr result

ID: Coptis21_contig00030955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030955
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272758.2| PREDICTED: DUF246 domain-containing protein ...   168   5e-40
emb|CBI18521.3| unnamed protein product [Vitis vinifera]              168   5e-40
ref|XP_002533585.1| conserved hypothetical protein [Ricinus comm...   159   3e-37
ref|XP_004141562.1| PREDICTED: DUF246 domain-containing protein ...   155   2e-36
ref|XP_002334712.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36

>ref|XP_002272758.2| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
           vinifera]
          Length = 582

 Score =  168 bits (425), Expect = 5e-40
 Identities = 77/90 (85%), Positives = 82/90 (91%)
 Frame = +3

Query: 3   EKMVDRMISNSSISGGKYVSVHLRFEEDMVAFSCCIYDGGEEEKHEMDIAREKGWRGSSE 182
           E MVDRMI NSS SGGKY+SVHLRFEEDMVAFSCC+YDGGEEEKHEMDIARE+GWRG   
Sbjct: 325 ENMVDRMIKNSSESGGKYISVHLRFEEDMVAFSCCMYDGGEEEKHEMDIARERGWRGKFN 384

Query: 183 KNGRVIKPGVIRMDGKCPLTPLEVGMMLRG 272
           K GR+I+PG IRMDGKCPLTPLEVGMMLRG
Sbjct: 385 KRGRIIRPGAIRMDGKCPLTPLEVGMMLRG 414


>emb|CBI18521.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  168 bits (425), Expect = 5e-40
 Identities = 77/90 (85%), Positives = 82/90 (91%)
 Frame = +3

Query: 3   EKMVDRMISNSSISGGKYVSVHLRFEEDMVAFSCCIYDGGEEEKHEMDIAREKGWRGSSE 182
           E MVDRMI NSS SGGKY+SVHLRFEEDMVAFSCC+YDGGEEEKHEMDIARE+GWRG   
Sbjct: 235 ENMVDRMIKNSSESGGKYISVHLRFEEDMVAFSCCMYDGGEEEKHEMDIARERGWRGKFN 294

Query: 183 KNGRVIKPGVIRMDGKCPLTPLEVGMMLRG 272
           K GR+I+PG IRMDGKCPLTPLEVGMMLRG
Sbjct: 295 KRGRIIRPGAIRMDGKCPLTPLEVGMMLRG 324


>ref|XP_002533585.1| conserved hypothetical protein [Ricinus communis]
           gi|223526544|gb|EEF28803.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 587

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/90 (83%), Positives = 79/90 (87%)
 Frame = +3

Query: 3   EKMVDRMISNSSISGGKYVSVHLRFEEDMVAFSCCIYDGGEEEKHEMDIAREKGWRGSSE 182
           EKMVDRM+ NSS SG KYVSVHLRFE DMVAFSCC YDGGEEEKHEMDIAREKGWRG   
Sbjct: 327 EKMVDRMVKNSSQSGEKYVSVHLRFEMDMVAFSCCEYDGGEEEKHEMDIAREKGWRGKFR 386

Query: 183 KNGRVIKPGVIRMDGKCPLTPLEVGMMLRG 272
           + GRVI+PG  R+DGKCPLTPLEVGMMLRG
Sbjct: 387 RRGRVIRPGANRVDGKCPLTPLEVGMMLRG 416


>ref|XP_004141562.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus] gi|449506825|ref|XP_004162859.1| PREDICTED:
           DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 573

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/88 (81%), Positives = 78/88 (88%)
 Frame = +3

Query: 9   MVDRMISNSSISGGKYVSVHLRFEEDMVAFSCCIYDGGEEEKHEMDIAREKGWRGSSEKN 188
           MVDRMI  SS SGGKY+SVHLRFEEDMVAFSCC YDGGEEEKHEMD+ARE+ WRG   + 
Sbjct: 325 MVDRMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRR 384

Query: 189 GRVIKPGVIRMDGKCPLTPLEVGMMLRG 272
           GRVI+PGV R+DGKCPLTPLEVGMMLRG
Sbjct: 385 GRVIRPGVNRVDGKCPLTPLEVGMMLRG 412


>ref|XP_002334712.1| predicted protein [Populus trichocarpa] gi|222874302|gb|EEF11433.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  154 bits (388), Expect = 9e-36
 Identities = 73/90 (81%), Positives = 77/90 (85%)
 Frame = +3

Query: 3   EKMVDRMISNSSISGGKYVSVHLRFEEDMVAFSCCIYDGGEEEKHEMDIAREKGWRGSSE 182
           E+MVDRMI NSS SGGKYVSVHLRFE DMVAFSCC YDGGEEEK EMDIARE  WRG   
Sbjct: 49  EQMVDRMIKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARESAWRGKFR 108

Query: 183 KNGRVIKPGVIRMDGKCPLTPLEVGMMLRG 272
           + GRVI+PG  R+DGKCPLTPLEVGMMLRG
Sbjct: 109 RRGRVIRPGANRVDGKCPLTPLEVGMMLRG 138


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