BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030950
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17870.3| unnamed protein product [Vitis vinifera]              140   3e-31
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...   140   3e-31
ref|XP_002511366.1| ring finger protein, putative [Ricinus commu...   131   2e-28
ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thali...   117   3e-24
sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL...   117   3e-24

>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  140 bits (353), Expect = 3e-31
 Identities = 89/172 (51%), Positives = 114/172 (66%), Gaps = 7/172 (4%)
 Frame = +3

Query: 3   RRISGRHSSAGERTSNFPFLQILI---ESTQFSRRSVDSAIS--RKRSESVTVGCFERGG 167
           RR+SGRHSSAGER S    +QI++   + T  SRRS+DS+ S  RKR+E V VGCF+R  
Sbjct: 213 RRVSGRHSSAGERRSGL--VQIVLHKPDETTSSRRSLDSSSSSSRKRNEPVAVGCFDRP- 269

Query: 168 RKDGLLLSESDRENFLKRFEHKIILS--NESGSHNRWSDLRPSDLLYLQSEMIISNNGRY 341
           RKD LLL+  DR +F +R +H+II+S     G H RWSD++PSDLLYL+SEMIIS+N R 
Sbjct: 270 RKDELLLTSEDRNSFERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRRL 329

Query: 342 SLSSNQHKRVAECEEDKSSGRDVINARSVSEITGLNRFSHKTEVYTENSEQR 497
              S+ H  +   E    SGR VIN+RSVSEITGL+R          + +QR
Sbjct: 330 ---SSCHGTI---EGGSWSGRSVINSRSVSEITGLSRLGSNYHHLDRHHQQR 375


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score =  140 bits (353), Expect = 3e-31
 Identities = 89/172 (51%), Positives = 114/172 (66%), Gaps = 7/172 (4%)
 Frame = +3

Query: 3   RRISGRHSSAGERTSNFPFLQILI---ESTQFSRRSVDSAIS--RKRSESVTVGCFERGG 167
           RR+SGRHSSAGER S    +QI++   + T  SRRS+DS+ S  RKR+E V VGCF+R  
Sbjct: 213 RRVSGRHSSAGERRSGL--VQIVLHKPDETTSSRRSLDSSSSSSRKRNEPVAVGCFDRP- 269

Query: 168 RKDGLLLSESDRENFLKRFEHKIILS--NESGSHNRWSDLRPSDLLYLQSEMIISNNGRY 341
           RKD LLL+  DR +F +R +H+II+S     G H RWSD++PSDLLYL+SEMIIS+N R 
Sbjct: 270 RKDELLLTSEDRNSFERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRRL 329

Query: 342 SLSSNQHKRVAECEEDKSSGRDVINARSVSEITGLNRFSHKTEVYTENSEQR 497
              S+ H  +   E    SGR VIN+RSVSEITGL+R          + +QR
Sbjct: 330 ---SSCHGTI---EGGSWSGRSVINSRSVSEITGLSRLGSNYHHLDRHHQQR 375


>ref|XP_002511366.1| ring finger protein, putative [Ricinus communis]
           gi|223550481|gb|EEF51968.1| ring finger protein,
           putative [Ricinus communis]
          Length = 493

 Score =  131 bits (329), Expect = 2e-28
 Identities = 92/222 (41%), Positives = 123/222 (55%), Gaps = 57/222 (25%)
 Frame = +3

Query: 3   RRISGRHSSAGERTSNFPFLQILI-------ESTQFSRRSVDSAISRK-------RSESV 140
           RRISGRHSSAGE+ S F   QI++       ++T F+RRS+DS   +K       R+ESV
Sbjct: 239 RRISGRHSSAGEKASGFALSQIVVQRPSATEQTTWFARRSLDSFSMKKNKNNHITRNESV 298

Query: 141 TVGCFER---GGRKDGLLL--------SESDRENF---------------------LKRF 224
            VGCF+R     RKDGLLL         +SD ++                        RF
Sbjct: 299 AVGCFDRYQSHQRKDGLLLLTNNSNGDGDSDGDDHSLESRRTSTASVNAGAGAGVDKTRF 358

Query: 225 EHKIILSNESGSHNRWSDLRPSDLLYLQSEMIISNNGRYSLSS-----------NQHKRV 371
           EH+II+S  + S  RWSD+ PSDLLYL+SEMI+S+N R+S++S           +Q ++ 
Sbjct: 359 EHRIIVSG-NASDERWSDVHPSDLLYLRSEMILSDNRRFSMTSGSRPSVGRRQHHQKQQN 417

Query: 372 AECEEDKSSGRDVINARSVSEITGLNRFSHKTEVYTENSEQR 497
           A  +   S GR VIN RSVSEITGLNRFS +    + +  +R
Sbjct: 418 AVVKGPSSDGRSVINGRSVSEITGLNRFSDRESNNSRHHRER 459


>ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thaliana]
           gi|58743300|gb|AAW81728.1| At5g05810 [Arabidopsis
           thaliana] gi|61656157|gb|AAX49381.1| At5g05810
           [Arabidopsis thaliana] gi|332003545|gb|AED90928.1|
           RING-H2 finger protein ATL43 [Arabidopsis thaliana]
          Length = 353

 Score =  117 bits (292), Expect = 3e-24
 Identities = 76/157 (48%), Positives = 100/157 (63%), Gaps = 8/157 (5%)
 Frame = +3

Query: 6   RISGRHSSAGERTSNFPFLQIL--IESTQFS-RRSVDSAIS-----RKRSESVTVGCFER 161
           RISGRHSSAGER S    ++     +S   S RRS+DS++       ++SESV V C +R
Sbjct: 179 RISGRHSSAGERASRLNEIRTSSSYKSNPMSFRRSLDSSLKVNDAGEEKSESVAVNCLDR 238

Query: 162 GGRKDGLLLSESDRENFLKRFEHKIILSNESGSHNRWSDLRPSDLLYLQSEMIISNNGRY 341
             RKDGLLL  + RE+F  RFEH+II+S  +    RWS++RPSDLLYL+SEMI+S+    
Sbjct: 239 LQRKDGLLLIPN-RESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMILSD---- 293

Query: 342 SLSSNQHKRVAECEEDKSSGRDVINARSVSEITGLNR 452
                  +++A  E     GRDVIN RSVSE+TG+ R
Sbjct: 294 ------CRKLAAAE----GGRDVINGRSVSELTGIER 320


>sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL43; Flags: Precursor
           gi|9759106|dbj|BAB09675.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 407

 Score =  117 bits (292), Expect = 3e-24
 Identities = 76/157 (48%), Positives = 100/157 (63%), Gaps = 8/157 (5%)
 Frame = +3

Query: 6   RISGRHSSAGERTSNFPFLQIL--IESTQFS-RRSVDSAIS-----RKRSESVTVGCFER 161
           RISGRHSSAGER S    ++     +S   S RRS+DS++       ++SESV V C +R
Sbjct: 233 RISGRHSSAGERASRLNEIRTSSSYKSNPMSFRRSLDSSLKVNDAGEEKSESVAVNCLDR 292

Query: 162 GGRKDGLLLSESDRENFLKRFEHKIILSNESGSHNRWSDLRPSDLLYLQSEMIISNNGRY 341
             RKDGLLL  + RE+F  RFEH+II+S  +    RWS++RPSDLLYL+SEMI+S+    
Sbjct: 293 LQRKDGLLLIPN-RESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMILSD---- 347

Query: 342 SLSSNQHKRVAECEEDKSSGRDVINARSVSEITGLNR 452
                  +++A  E     GRDVIN RSVSE+TG+ R
Sbjct: 348 ------CRKLAAAE----GGRDVINGRSVSELTGIER 374