BLASTX nr result

ID: Coptis21_contig00030943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030943
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYL...   170   1e-40
emb|CBI27421.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002514555.1| menaquinone biosynthesis protein, putative [...   154   7e-36
ref|XP_003545988.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   146   2e-33
ref|XP_004155371.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   141   6e-32

>ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYLLO, chloroplastic-like
            [Vitis vinifera]
          Length = 1614

 Score =  170 bits (430), Expect = 1e-40
 Identities = 80/113 (70%), Positives = 95/113 (84%)
 Frame = +3

Query: 87   RIQLSAPPTSTRISGNPSRFYKDGFILAIYLEDGCVGFGEVAPLEIHKENLQDVEEQLRF 266
            RI L APPTS  ++   + FY+DGFIL + LE G VGFGEVAPLEIH+E+L DVEEQLRF
Sbjct: 896  RIPLCAPPTSASVNYKTTTFYRDGFILILSLEGGHVGFGEVAPLEIHEEDLLDVEEQLRF 955

Query: 267  LVHMIRGAKLSYLLPLLSGSFSSWIWGCLGIPPHSLFPSVRCGMEMAVLNALA 425
            L H+I+GAK+S+ LPLL GSFSSWIW CLGIPP S+FPSVRCG+EMA+LNA+A
Sbjct: 956  LHHVIKGAKISFYLPLLKGSFSSWIWSCLGIPPSSIFPSVRCGLEMAILNAIA 1008


>emb|CBI27421.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  170 bits (430), Expect = 1e-40
 Identities = 80/113 (70%), Positives = 95/113 (84%)
 Frame = +3

Query: 87  RIQLSAPPTSTRISGNPSRFYKDGFILAIYLEDGCVGFGEVAPLEIHKENLQDVEEQLRF 266
           RI L APPTS  ++   + FY+DGFIL + LE G VGFGEVAPLEIH+E+L DVEEQLRF
Sbjct: 233 RIPLCAPPTSASVNYKTTTFYRDGFILILSLEGGHVGFGEVAPLEIHEEDLLDVEEQLRF 292

Query: 267 LVHMIRGAKLSYLLPLLSGSFSSWIWGCLGIPPHSLFPSVRCGMEMAVLNALA 425
           L H+I+GAK+S+ LPLL GSFSSWIW CLGIPP S+FPSVRCG+EMA+LNA+A
Sbjct: 293 LHHVIKGAKISFYLPLLKGSFSSWIWSCLGIPPSSIFPSVRCGLEMAILNAIA 345


>ref|XP_002514555.1| menaquinone biosynthesis protein, putative [Ricinus communis]
            gi|223546159|gb|EEF47661.1| menaquinone biosynthesis
            protein, putative [Ricinus communis]
          Length = 1679

 Score =  154 bits (389), Expect = 7e-36
 Identities = 72/113 (63%), Positives = 94/113 (83%)
 Frame = +3

Query: 87   RIQLSAPPTSTRISGNPSRFYKDGFILAIYLEDGCVGFGEVAPLEIHKENLQDVEEQLRF 266
            RIQL APPTS  +  + + F+++G+IL++ LEDG VG GEVAP+EIHKE++ DVEEQLRF
Sbjct: 968  RIQLCAPPTSAPVDLDTNEFHREGYILSLSLEDGSVGCGEVAPIEIHKEDMLDVEEQLRF 1027

Query: 267  LVHMIRGAKLSYLLPLLSGSFSSWIWGCLGIPPHSLFPSVRCGMEMAVLNALA 425
            L+H+I+G K+S+ LPLL  SFSSWIW  LGIP +S+FPSVR G+EMA+LNA+A
Sbjct: 1028 LLHVIKGTKISFSLPLLKESFSSWIWNNLGIPENSIFPSVRLGLEMAILNAIA 1080


>ref|XP_003545988.1| PREDICTED: protein PHYLLO, chloroplastic-like [Glycine max]
          Length = 1614

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/113 (61%), Positives = 87/113 (76%)
 Frame = +3

Query: 87   RIQLSAPPTSTRISGNPSRFYKDGFILAIYLEDGCVGFGEVAPLEIHKENLQDVEEQLRF 266
            RI L APPTST +S     FY++GFIL++ LE+G VG+GEVAP++IH+ENL D E QLRF
Sbjct: 916  RIALEAPPTSTFVSDGCKEFYREGFILSLVLEEGSVGYGEVAPIDIHRENLVDAEYQLRF 975

Query: 267  LVHMIRGAKLSYLLPLLSGSFSSWIWGCLGIPPHSLFPSVRCGMEMAVLNALA 425
            L+H++    +S  L LL GSFS WIW  LGI P S+FPSVRCG+EMA+LNA+A
Sbjct: 976  LIHVMEHVDVSCFLSLLKGSFSYWIWHELGIMPSSIFPSVRCGLEMAILNAIA 1028


>ref|XP_004155371.1| PREDICTED: protein PHYLLO, chloroplastic-like [Cucumis sativus]
          Length = 1794

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/115 (59%), Positives = 94/115 (81%), Gaps = 2/115 (1%)
 Frame = +3

Query: 87   RIQLSAPPTSTRISGNPSR--FYKDGFILAIYLEDGCVGFGEVAPLEIHKENLQDVEEQL 260
            RI L APPT++  S +  R  F+++GFIL+++LEDG +G GEV+PL+IH+ENL DVEEQL
Sbjct: 1066 RIPLCAPPTTSSSSFDQVRREFFREGFILSLFLEDGSLGLGEVSPLDIHRENLLDVEEQL 1125

Query: 261  RFLVHMIRGAKLSYLLPLLSGSFSSWIWGCLGIPPHSLFPSVRCGMEMAVLNALA 425
              L+ +++GAK+S  +PLL GSFSSW++  LGIPP S++PSVRCG+EMAVL+A+A
Sbjct: 1126 NCLIPILKGAKISSSIPLLRGSFSSWVFHELGIPPSSIYPSVRCGLEMAVLHAIA 1180


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