BLASTX nr result

ID: Coptis21_contig00030938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030938
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59925.1| hypothetical protein VITISV_043883 [Vitis vinifera]   119   5e-25
ref|XP_003517713.1| PREDICTED: uncharacterized protein LOC100798...   101   1e-19
emb|CBI28534.3| unnamed protein product [Vitis vinifera]               97   2e-18
ref|XP_002314615.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-18
ref|XP_003613224.1| hypothetical protein MTR_5g034200 [Medicago ...    94   3e-17

>emb|CAN59925.1| hypothetical protein VITISV_043883 [Vitis vinifera]
          Length = 119

 Score =  119 bits (298), Expect = 5e-25
 Identities = 63/115 (54%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
 Frame = -3

Query: 511 MSLP---PPVIYPNTVTTQPSSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHSK 341
           MSLP   PPVIYPNTVT QP SHS GSFG VFI+L VI+V+SA AC LG+LC RR  H  
Sbjct: 1   MSLPQQQPPVIYPNTVTRQPPSHSNGSFGTVFIVLGVIVVISAIACVLGRLCNRRRHHHP 60

Query: 340 PKRDHQNSRPKDGDLEFGFKQGIPMAKPTGHGEIRE--PRPVYNGEHKGDTRFAE 182
             + +   RPK+ DLEFGF +G P AKP G+G  +    RP  NGE + + +  E
Sbjct: 61  NPKQNSAFRPKEPDLEFGFDKGRPTAKPAGNGGPKHNGHRPFENGEIRAENKPTE 115


>ref|XP_003517713.1| PREDICTED: uncharacterized protein LOC100798784 [Glycine max]
          Length = 149

 Score =  101 bits (252), Expect = 1e-19
 Identities = 56/119 (47%), Positives = 74/119 (62%), Gaps = 13/119 (10%)
 Frame = -3

Query: 499 PPVIYPNTVTTQ-PSSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHS------K 341
           P  +YP +VT + P  HS GSFG VF++LA+IIV+SA ACCLG+LC RR  HS      K
Sbjct: 21  PVQVYPTSVTYESPPHHSNGSFGSVFVVLAIIIVISAVACCLGRLCNRRGGHSHNQKHVK 80

Query: 340 PKR------DHQNSRPKDGDLEFGFKQGIPMAKPTGHGEIREPRPVYNGEHKGDTRFAE 182
           P++      +H N RPK+ D+EFGF + I  +KP GHG  R  +P+    H GD +  E
Sbjct: 81  PQKKQQQQQNHHNFRPKEVDIEFGFDKRIAASKPNGHGAGRGIKPL---PHHGDVKTFE 136


>emb|CBI28534.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 50/84 (59%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
 Frame = -3

Query: 511 MSLP---PPVIYPNTVTTQPSSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHSK 341
           MSLP   PPVIYPNTVT QP SHS GSFG VFI+L VI+V+SA AC LG+LC RR  H  
Sbjct: 1   MSLPQQQPPVIYPNTVTRQPPSHSNGSFGTVFIVLGVIVVISAIACVLGRLCNRRRHHHP 60

Query: 340 PKRDHQNSRPKDGDLEFGFKQGIP 269
             + +   RPK+ DLEF   Q  P
Sbjct: 61  NPKQNSAFRPKEPDLEFVIFQNYP 84


>ref|XP_002314615.1| predicted protein [Populus trichocarpa] gi|222863655|gb|EEF00786.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 57/127 (44%), Positives = 76/127 (59%), Gaps = 18/127 (14%)
 Frame = -3

Query: 499 PPVIYPNTVTTQ-PSSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHSKPKRDHQ 323
           P V+YPNTV  Q PSSHS GSFG VFI+LAVI+V+SA ACCLG++C +RL+  K   + Q
Sbjct: 13  PVVLYPNTVARQAPSSHSNGSFGTVFIVLAVIVVISAIACCLGRICNKRLNKQKVNNNKQ 72

Query: 322 N---------SRPK--DGDLEFGFKQGIPMAKPTG--HGEIREPRPVYNGEHKG----DT 194
           +          RPK  + DLEFGF +G P A+ +     + R  +P  NG   G    +T
Sbjct: 73  SLQHSQHTPTFRPKERESDLEFGFDKGFPTARNSNMKGSDPRGHKPFGNGHFSGRGETNT 132

Query: 193 RFAEHGD 173
              +HG+
Sbjct: 133 SAGDHGE 139


>ref|XP_003613224.1| hypothetical protein MTR_5g034200 [Medicago truncatula]
           gi|355514559|gb|AES96182.1| hypothetical protein
           MTR_5g034200 [Medicago truncatula]
           gi|388520363|gb|AFK48243.1| unknown [Medicago
           truncatula]
          Length = 168

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 58/133 (43%), Positives = 75/133 (56%), Gaps = 35/133 (26%)
 Frame = -3

Query: 499 PPVIYPNTVTTQ-----PSSHSK-GSFGPVFIILAVIIVLSAFACCLGQLCARR---LSH 347
           P  +YP TVT Q     P  HS  GSFG VF++LA+IIV+SA ACCLG+ C+RR    SH
Sbjct: 16  PVQVYPTTVTYQYAPPEPDHHSSNGSFGSVFVVLAIIIVISAVACCLGRFCSRRGNGKSH 75

Query: 346 S-KP-----KRDHQNSRPKDGDLEFGFKQGIPMAKP--------------------TGHG 245
           S KP     +++HQ+SRPK+ D+EFGF + I  +KP                     GHG
Sbjct: 76  SQKPVKHQKQQNHQHSRPKEVDIEFGFDKKIAASKPMNNGHGGFPKNNGHGGFSKNNGHG 135

Query: 244 EIREPRPVYNGEH 206
            +R  +PV  G H
Sbjct: 136 GVRVQKPVAQGHH 148


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