BLASTX nr result

ID: Coptis21_contig00030936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030936
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8...   184   5e-45
emb|CAN67885.1| hypothetical protein VITISV_042572 [Vitis vinifera]   184   5e-45
ref|XP_002329680.1| white-brown-complex ABC transporter family [...   179   2e-43
ref|XP_003556131.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   176   2e-42
ref|XP_003535589.1| PREDICTED: ABC transporter G family member 8...   176   2e-42

>ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8-like [Vitis vinifera]
          Length = 597

 Score =  184 bits (468), Expect = 5e-45
 Identities = 84/105 (80%), Positives = 92/105 (87%)
 Frame = +3

Query: 6   TSLVTIFLGAFFLFSGYFISCKGLPKYWLFMHYISMYKYALDALLINEYSCLVSRCLVWF 185
           TSLVTIFLGAFFLFSGYFIS   +PKYWLFMH+ SMYKYALDA LINEYSCLVSRCL+W+
Sbjct: 483 TSLVTIFLGAFFLFSGYFISKDSMPKYWLFMHFFSMYKYALDAFLINEYSCLVSRCLLWY 542

Query: 186 EDSKQCMVTGNDVLVNKGLHERQRWTNIYILIGFFVLYRVLCLVV 320
           E++K CM TG DVL  KGLHERQRWTNIY+LIGFF  YRVLC +V
Sbjct: 543 EENKTCMATGRDVLQKKGLHERQRWTNIYMLIGFFFFYRVLCFLV 587


>emb|CAN67885.1| hypothetical protein VITISV_042572 [Vitis vinifera]
          Length = 134

 Score =  184 bits (468), Expect = 5e-45
 Identities = 84/105 (80%), Positives = 92/105 (87%)
 Frame = +3

Query: 6   TSLVTIFLGAFFLFSGYFISCKGLPKYWLFMHYISMYKYALDALLINEYSCLVSRCLVWF 185
           TSLVTIFLGAFFLFSGYFIS   +PKYWLFMH+ SMYKYALDA LINEYSCLVSRCL+W+
Sbjct: 20  TSLVTIFLGAFFLFSGYFISKDSMPKYWLFMHFFSMYKYALDAFLINEYSCLVSRCLLWY 79

Query: 186 EDSKQCMVTGNDVLVNKGLHERQRWTNIYILIGFFVLYRVLCLVV 320
           E++K CM TG DVL  KGLHERQRWTNIY+LIGFF  YRVLC +V
Sbjct: 80  EENKTCMATGRDVLQKKGLHERQRWTNIYMLIGFFFFYRVLCFLV 124


>ref|XP_002329680.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222870588|gb|EEF07719.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 593

 Score =  179 bits (455), Expect = 2e-43
 Identities = 80/105 (76%), Positives = 92/105 (87%)
 Frame = +3

Query: 6   TSLVTIFLGAFFLFSGYFISCKGLPKYWLFMHYISMYKYALDALLINEYSCLVSRCLVWF 185
           TSLVTI LG FFLFSGYFIS   +PKYWLFMH+ SMYKYALDALLINEYSCLV++C +W+
Sbjct: 479 TSLVTILLGGFFLFSGYFISQDSMPKYWLFMHFFSMYKYALDALLINEYSCLVNKCFLWY 538

Query: 186 EDSKQCMVTGNDVLVNKGLHERQRWTNIYILIGFFVLYRVLCLVV 320
           +++  CMVTG DVL  +GLHERQRWTNIYIL+GFFV YRVLCL+V
Sbjct: 539 QENSTCMVTGGDVLQKRGLHERQRWTNIYILLGFFVFYRVLCLLV 583


>ref|XP_003556131.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
           8-like [Glycine max]
          Length = 601

 Score =  176 bits (446), Expect = 2e-42
 Identities = 77/105 (73%), Positives = 93/105 (88%)
 Frame = +3

Query: 6   TSLVTIFLGAFFLFSGYFISCKGLPKYWLFMHYISMYKYALDALLINEYSCLVSRCLVWF 185
           TSL+T+ L AFFLFSGYFIS + LPKYWLFMH+ SMYKYALDALLINEYSCLVSRCL+W+
Sbjct: 487 TSLLTVLLAAFFLFSGYFISKESLPKYWLFMHFFSMYKYALDALLINEYSCLVSRCLIWY 546

Query: 186 EDSKQCMVTGNDVLVNKGLHERQRWTNIYILIGFFVLYRVLCLVV 320
           ++++QCMVTG DVL  +GL E +RWTN+Y L+GFF+LYRVLC +V
Sbjct: 547 QENEQCMVTGGDVLQKRGLKESERWTNVYFLLGFFLLYRVLCFLV 591


>ref|XP_003535589.1| PREDICTED: ABC transporter G family member 8-like [Glycine max]
          Length = 599

 Score =  176 bits (446), Expect = 2e-42
 Identities = 77/105 (73%), Positives = 93/105 (88%)
 Frame = +3

Query: 6   TSLVTIFLGAFFLFSGYFISCKGLPKYWLFMHYISMYKYALDALLINEYSCLVSRCLVWF 185
           TSL+T+ L AFFLFSGYFIS + LPKYWLFMH+ SMYKYALDALLINEYSCLV++CL+W+
Sbjct: 485 TSLLTVLLAAFFLFSGYFISKESLPKYWLFMHFFSMYKYALDALLINEYSCLVTKCLIWY 544

Query: 186 EDSKQCMVTGNDVLVNKGLHERQRWTNIYILIGFFVLYRVLCLVV 320
           ++++QCMVTG DVL  KGL E +RWTN+Y L+GFFVLYRVLC +V
Sbjct: 545 QENEQCMVTGGDVLQKKGLKESERWTNVYFLLGFFVLYRVLCFLV 589