BLASTX nr result
ID: Coptis21_contig00030919
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030919 (343 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251... 119 3e-25 emb|CBI25450.3| unnamed protein product [Vitis vinifera] 119 3e-25 emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera] 119 3e-25 ref|XP_002879856.1| pentatricopeptide repeat-containing protein ... 109 3e-22 ref|NP_181553.1| pentatricopeptide repeat-containing protein [Ar... 108 4e-22 >ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251820 [Vitis vinifera] Length = 613 Score = 119 bits (297), Expect = 3e-25 Identities = 56/112 (50%), Positives = 83/112 (74%) Frame = +2 Query: 5 FLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDRVNESVRVIESMIEKE 184 F+T T+A + LD+L + +DKGF RK+A+D LI LC+ RV+ES+R++++M++ + Sbjct: 77 FITNTDAGLSV-LDELSQALAHLDKGFLRKSAYDSLIARLCRLKRVDESLRLVDTMVQSD 135 Query: 185 VGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMAHCF 340 GVNA TF P+LN LTRKR+++EAW V+ MRE V D+TAYN++L A+CF Sbjct: 136 HGVNACTFHPILNVLTRKRKMEEAWRVMTIMRESGVSPDVTAYNYLLTAYCF 187 >emb|CBI25450.3| unnamed protein product [Vitis vinifera] Length = 527 Score = 119 bits (297), Expect = 3e-25 Identities = 56/112 (50%), Positives = 83/112 (74%) Frame = +2 Query: 5 FLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDRVNESVRVIESMIEKE 184 F+T T+A + LD+L + +DKGF RK+A+D LI LC+ RV+ES+R++++M++ + Sbjct: 77 FITNTDAGLSV-LDELSQALAHLDKGFLRKSAYDSLIARLCRLKRVDESLRLVDTMVQSD 135 Query: 185 VGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMAHCF 340 GVNA TF P+LN LTRKR+++EAW V+ MRE V D+TAYN++L A+CF Sbjct: 136 HGVNACTFHPILNVLTRKRKMEEAWRVMTIMRESGVSPDVTAYNYLLTAYCF 187 >emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera] Length = 330 Score = 119 bits (297), Expect = 3e-25 Identities = 56/112 (50%), Positives = 83/112 (74%) Frame = +2 Query: 5 FLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDRVNESVRVIESMIEKE 184 F+T T+A + LD+L + +DKGF RK+A+D LI LC+ RV+ES+R++++M++ + Sbjct: 77 FITNTDAGLSV-LDELSQALAHLDKGFXRKSAYDSLIARLCRLKRVDESLRLVDTMVQSD 135 Query: 185 VGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMAHCF 340 GVNA TF P+LN LTRKR+++EAW V+ MRE V D+TAYN++L A+CF Sbjct: 136 HGVNACTFHPILNVLTRKRKMEEAWRVMTIMRESGVSPDVTAYNYLLTAYCF 187 >ref|XP_002879856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297325695|gb|EFH56115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 338 Score = 109 bits (272), Expect = 3e-22 Identities = 52/114 (45%), Positives = 80/114 (70%) Frame = +2 Query: 2 KFLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDRVNESVRVIESMIEK 181 KFLT T +++ L+D+ ++ ++D GF+RKNA+D LI+ LCK R+N+++ VI M Sbjct: 78 KFLTNT-VSYSSALEDIRRVLPQIDGGFSRKNAYDILISRLCKLGRINDALIVIGDMSNG 136 Query: 182 EVGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMAHCFE 343 + + TF P+L +LTRK +IDEAW VVE MR +V +D+TAYN+ L +HC++ Sbjct: 137 RLSLTPSTFHPILCSLTRKNKIDEAWRVVESMRSKSVPMDVTAYNYFLTSHCYD 190 >ref|NP_181553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75265350|sp|Q9S733.1|PP196_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40240, mitochondrial; Flags: Precursor gi|4587998|gb|AAD25939.1|AF085279_12 hypothetical protein [Arabidopsis thaliana] gi|4586041|gb|AAD25659.1| hypothetical protein [Arabidopsis thaliana] gi|28393486|gb|AAO42164.1| unknown protein [Arabidopsis thaliana] gi|28973567|gb|AAO64108.1| unknown protein [Arabidopsis thaliana] gi|110737021|dbj|BAF00465.1| hypothetical protein [Arabidopsis thaliana] gi|330254707|gb|AEC09801.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 351 Score = 108 bits (271), Expect = 4e-22 Identities = 52/114 (45%), Positives = 82/114 (71%) Frame = +2 Query: 2 KFLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDRVNESVRVIESMIEK 181 KFLT T A +++ L+DL ++ ++D GF+RKNA+D LI+ LCK R+++++ VI M Sbjct: 78 KFLTNT-ASYSSYLEDLRRVLPQIDGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNG 136 Query: 182 EVGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMAHCFE 343 +G+ T+ P+L +LTRK +I+EAW VVE MR +V +D+TAYN+ L +HC++ Sbjct: 137 RLGLTPSTYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYD 190