BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030919
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251...   119   3e-25
emb|CBI25450.3| unnamed protein product [Vitis vinifera]              119   3e-25
emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]   119   3e-25
ref|XP_002879856.1| pentatricopeptide repeat-containing protein ...   109   3e-22
ref|NP_181553.1| pentatricopeptide repeat-containing protein [Ar...   108   4e-22

>ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251820 [Vitis vinifera]
          Length = 613

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/112 (50%), Positives = 83/112 (74%)
 Frame = +2

Query: 5   FLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDRVNESVRVIESMIEKE 184
           F+T T+A  +  LD+L   +  +DKGF RK+A+D LI  LC+  RV+ES+R++++M++ +
Sbjct: 77  FITNTDAGLSV-LDELSQALAHLDKGFLRKSAYDSLIARLCRLKRVDESLRLVDTMVQSD 135

Query: 185 VGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMAHCF 340
            GVNA TF P+LN LTRKR+++EAW V+  MRE  V  D+TAYN++L A+CF
Sbjct: 136 HGVNACTFHPILNVLTRKRKMEEAWRVMTIMRESGVSPDVTAYNYLLTAYCF 187


>emb|CBI25450.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/112 (50%), Positives = 83/112 (74%)
 Frame = +2

Query: 5   FLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDRVNESVRVIESMIEKE 184
           F+T T+A  +  LD+L   +  +DKGF RK+A+D LI  LC+  RV+ES+R++++M++ +
Sbjct: 77  FITNTDAGLSV-LDELSQALAHLDKGFLRKSAYDSLIARLCRLKRVDESLRLVDTMVQSD 135

Query: 185 VGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMAHCF 340
            GVNA TF P+LN LTRKR+++EAW V+  MRE  V  D+TAYN++L A+CF
Sbjct: 136 HGVNACTFHPILNVLTRKRKMEEAWRVMTIMRESGVSPDVTAYNYLLTAYCF 187


>emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]
          Length = 330

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/112 (50%), Positives = 83/112 (74%)
 Frame = +2

Query: 5   FLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDRVNESVRVIESMIEKE 184
           F+T T+A  +  LD+L   +  +DKGF RK+A+D LI  LC+  RV+ES+R++++M++ +
Sbjct: 77  FITNTDAGLSV-LDELSQALAHLDKGFXRKSAYDSLIARLCRLKRVDESLRLVDTMVQSD 135

Query: 185 VGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMAHCF 340
            GVNA TF P+LN LTRKR+++EAW V+  MRE  V  D+TAYN++L A+CF
Sbjct: 136 HGVNACTFHPILNVLTRKRKMEEAWRVMTIMRESGVSPDVTAYNYLLTAYCF 187


>ref|XP_002879856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325695|gb|EFH56115.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 338

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/114 (45%), Positives = 80/114 (70%)
 Frame = +2

Query: 2   KFLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDRVNESVRVIESMIEK 181
           KFLT T   +++ L+D+  ++ ++D GF+RKNA+D LI+ LCK  R+N+++ VI  M   
Sbjct: 78  KFLTNT-VSYSSALEDIRRVLPQIDGGFSRKNAYDILISRLCKLGRINDALIVIGDMSNG 136

Query: 182 EVGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMAHCFE 343
            + +   TF P+L +LTRK +IDEAW VVE MR  +V +D+TAYN+ L +HC++
Sbjct: 137 RLSLTPSTFHPILCSLTRKNKIDEAWRVVESMRSKSVPMDVTAYNYFLTSHCYD 190


>ref|NP_181553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75265350|sp|Q9S733.1|PP196_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g40240, mitochondrial; Flags: Precursor
           gi|4587998|gb|AAD25939.1|AF085279_12 hypothetical
           protein [Arabidopsis thaliana] gi|4586041|gb|AAD25659.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|28393486|gb|AAO42164.1| unknown protein [Arabidopsis
           thaliana] gi|28973567|gb|AAO64108.1| unknown protein
           [Arabidopsis thaliana] gi|110737021|dbj|BAF00465.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330254707|gb|AEC09801.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 351

 Score =  108 bits (271), Expect = 4e-22
 Identities = 52/114 (45%), Positives = 82/114 (71%)
 Frame = +2

Query: 2   KFLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDRVNESVRVIESMIEK 181
           KFLT T A +++ L+DL  ++ ++D GF+RKNA+D LI+ LCK  R+++++ VI  M   
Sbjct: 78  KFLTNT-ASYSSYLEDLRRVLPQIDGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNG 136

Query: 182 EVGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMAHCFE 343
            +G+   T+ P+L +LTRK +I+EAW VVE MR  +V +D+TAYN+ L +HC++
Sbjct: 137 RLGLTPSTYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYD 190