BLASTX nr result

ID: Coptis21_contig00030906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030906
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867083.1| hypothetical protein ARALYDRAFT_491124 [Arab...    91   1e-16
ref|NP_195251.1| Rossmann-fold NAD(P)-binding domain-containing ...    91   1e-16
ref|XP_004139948.1| PREDICTED: uncharacterized protein ycf39-lik...    86   2e-15
ref|XP_002278811.1| PREDICTED: uncharacterized protein ycf39 [Vi...    84   1e-14
emb|CAN77228.1| hypothetical protein VITISV_029950 [Vitis vinifera]    84   1e-14

>ref|XP_002867083.1| hypothetical protein ARALYDRAFT_491124 [Arabidopsis lyrata subsp.
           lyrata] gi|297312919|gb|EFH43342.1| hypothetical protein
           ARALYDRAFT_491124 [Arabidopsis lyrata subsp. lyrata]
          Length = 400

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/50 (88%), Positives = 46/50 (92%)
 Frame = -2

Query: 151 VTIKCSAAATNLAPGTPVRPTSIRVVGATGTLGRQIVRRALDEGYEVRCL 2
           V + CSAAA NLAPGTPVRPTSI VVGATGTLGRQIVRRALDEGY+VRCL
Sbjct: 65  VPVTCSAAAVNLAPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCL 114


>ref|NP_195251.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana] gi|18087583|gb|AAL58922.1|AF462834_1
           AT4g35250/F23E12_190 [Arabidopsis thaliana]
           gi|3080425|emb|CAA18744.1| putative protein [Arabidopsis
           thaliana] gi|7270477|emb|CAB80242.1| putative protein
           [Arabidopsis thaliana] gi|22137054|gb|AAM91372.1|
           At4g35250/F23E12_190 [Arabidopsis thaliana]
           gi|332661085|gb|AEE86485.1| Rossmann-fold NAD(P)-binding
           domain-containing protein [Arabidopsis thaliana]
          Length = 395

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/50 (88%), Positives = 46/50 (92%)
 Frame = -2

Query: 151 VTIKCSAAATNLAPGTPVRPTSIRVVGATGTLGRQIVRRALDEGYEVRCL 2
           V + CSAAA NLAPGTPVRPTSI VVGATGTLGRQIVRRALDEGY+VRCL
Sbjct: 60  VPVTCSAAAVNLAPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCL 109


>ref|XP_004139948.1| PREDICTED: uncharacterized protein ycf39-like [Cucumis sativus]
           gi|449475769|ref|XP_004154546.1| PREDICTED:
           uncharacterized protein ycf39-like [Cucumis sativus]
          Length = 389

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 47/63 (74%), Positives = 51/63 (80%), Gaps = 5/63 (7%)
 Frame = -2

Query: 175 SSSQGKSS--VTIKCSAAAT---NLAPGTPVRPTSIRVVGATGTLGRQIVRRALDEGYEV 11
           SSS G+S     ++C+A  T   NLAPGTPVRPTSI VVGATGTLGRQIVRRALDEGYEV
Sbjct: 41  SSSSGRSCWLPLVRCAAQQTGPVNLAPGTPVRPTSILVVGATGTLGRQIVRRALDEGYEV 100

Query: 10  RCL 2
           RCL
Sbjct: 101 RCL 103


>ref|XP_002278811.1| PREDICTED: uncharacterized protein ycf39 [Vitis vinifera]
           gi|297744530|emb|CBI37792.3| unnamed protein product
           [Vitis vinifera]
          Length = 397

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/48 (79%), Positives = 43/48 (89%)
 Frame = -2

Query: 145 IKCSAAATNLAPGTPVRPTSIRVVGATGTLGRQIVRRALDEGYEVRCL 2
           ++CS AA NL PGTPVR TS+ VVGATGTLGRQ+VRRALDEGY+VRCL
Sbjct: 64  VRCSGAAVNLGPGTPVRSTSVLVVGATGTLGRQVVRRALDEGYDVRCL 111


>emb|CAN77228.1| hypothetical protein VITISV_029950 [Vitis vinifera]
          Length = 397

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/48 (79%), Positives = 43/48 (89%)
 Frame = -2

Query: 145 IKCSAAATNLAPGTPVRPTSIRVVGATGTLGRQIVRRALDEGYEVRCL 2
           ++CS AA NL PGTPVR TS+ VVGATGTLGRQ+VRRALDEGY+VRCL
Sbjct: 64  VRCSGAAVNLGPGTPVRSTSVLVVGATGTLGRQVVRRALDEGYDVRCL 111


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