BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030895
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi...   422   e-116
ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containi...   421   e-116
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]   421   e-116
ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|2...   417   e-114
ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group] g...   407   e-111

>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Vitis vinifera]
          Length = 852

 Score =  422 bits (1084), Expect = e-116
 Identities = 200/271 (73%), Positives = 233/271 (85%)
 Frame = +3

Query: 3    RGEEALQVFNTMQKASLVPDEVTFLVVLYACSHSGMIEKGIEYFNTMQGKYGVAPGKKHY 182
            RGEEALQ+F  MQK  LVPD VTF+VVLYACSHSGM+++GI YFN M   +GV PG +HY
Sbjct: 561  RGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHY 620

Query: 183  ACMVDLLGRAGRLDEAVKLIKGTPMEHSPIVWAALLSVCRIHANVELGEYAAERLIELDA 362
            ACMVDLL RAGRLDEA++LI+G PM+ +P VW ALLS CR++ANVELGEYAA +L+EL++
Sbjct: 621  ACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELES 680

Query: 363  DYDGSYTLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTVSFFAGDRSHP 542
              DGSYTLLSNIYA+A  WKDVARIR LMK TG+KKRPGCSWVQG+KGT +FFAGD SHP
Sbjct: 681  GNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHP 740

Query: 543  LSQEIYEFLGDLIRRIKVIGYVPQTSFALHDVDEEEKSDLLYEHSEKLALAYGILTSAPG 722
            +SQ+IY+ L DL++RIK +GYVP   FALHDVD+EEK DLL EHSEKLALAYGILT+APG
Sbjct: 741  MSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPG 800

Query: 723  APIRITKNLRVCGDCHNAFTFISKIVNHEII 815
            APIRITKNLR CGDCH+AFT+IS I+ HEII
Sbjct: 801  APIRITKNLRACGDCHSAFTYISIIIEHEII 831


>ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Glycine max]
          Length = 986

 Score =  421 bits (1083), Expect = e-116
 Identities = 199/271 (73%), Positives = 232/271 (85%)
 Frame = +3

Query: 3    RGEEALQVFNTMQKASLVPDEVTFLVVLYACSHSGMIEKGIEYFNTMQGKYGVAPGKKHY 182
            RGE+AL+VF+ M+K  LVPD +TFLVVLYACSHSGM++ GI +FN M   +GV PG +HY
Sbjct: 695  RGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHY 754

Query: 183  ACMVDLLGRAGRLDEAVKLIKGTPMEHSPIVWAALLSVCRIHANVELGEYAAERLIELDA 362
            ACMVDL GRAGRL EA+KLI   PME +P+VW ALLS CR+H+NVELGE+AA RL+EL++
Sbjct: 755  ACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELES 814

Query: 363  DYDGSYTLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTVSFFAGDRSHP 542
              DGSYTLLSNIYA+A RWKDVARIR  MKRTG+KKRPGCSW+QG+KG  +F+ GDRSHP
Sbjct: 815  GNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHP 874

Query: 543  LSQEIYEFLGDLIRRIKVIGYVPQTSFALHDVDEEEKSDLLYEHSEKLALAYGILTSAPG 722
             SQ+IYE L DLI+RIK IGYVPQTSFALHDVD+EEK DLL+EHSEKLALAYGILT  P 
Sbjct: 875  QSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPR 934

Query: 723  APIRITKNLRVCGDCHNAFTFISKIVNHEII 815
            APIRITKNLR+CGDCH+A T+ISKI+ HEII
Sbjct: 935  APIRITKNLRICGDCHSAITYISKIIEHEII 965


>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  421 bits (1083), Expect = e-116
 Identities = 200/271 (73%), Positives = 233/271 (85%)
 Frame = +3

Query: 3    RGEEALQVFNTMQKASLVPDEVTFLVVLYACSHSGMIEKGIEYFNTMQGKYGVAPGKKHY 182
            RGEEALQ+F  MQK  LVPD VTF+VVLYACSHSGM+++GI YFN M   +GV PG +HY
Sbjct: 580  RGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHY 639

Query: 183  ACMVDLLGRAGRLDEAVKLIKGTPMEHSPIVWAALLSVCRIHANVELGEYAAERLIELDA 362
            ACMVDLL RAGRLDEA++LI+G PM+ +P VW ALLS CR++ANVELGEYAA +L+EL++
Sbjct: 640  ACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELES 699

Query: 363  DYDGSYTLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTVSFFAGDRSHP 542
              DGSYTLLSNIYA+A  WKDVARIR LMK TG+KKRPGCSWVQG+KGT +FFAGD SHP
Sbjct: 700  GNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHP 759

Query: 543  LSQEIYEFLGDLIRRIKVIGYVPQTSFALHDVDEEEKSDLLYEHSEKLALAYGILTSAPG 722
            +SQ+IY+ L DL++RIK +GYVP   FALHDVD+EEK DLL EHSEKLALAYGILT+APG
Sbjct: 760  MSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPG 819

Query: 723  APIRITKNLRVCGDCHNAFTFISKIVNHEII 815
            APIRITKNLR CGDCH+AFT+IS I+ HEII
Sbjct: 820  APIRITKNLRACGDCHSAFTYISIIIEHEII 850


>ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|222858987|gb|EEE96534.1|
            predicted protein [Populus trichocarpa]
          Length = 539

 Score =  417 bits (1071), Expect = e-114
 Identities = 197/271 (72%), Positives = 240/271 (88%)
 Frame = +3

Query: 3    RGEEALQVFNTMQKASLVPDEVTFLVVLYACSHSGMIEKGIEYFNTMQGKYGVAPGKKHY 182
            RG+EAL+VF+ M++  L PD VT LVVLYACSHSGMI++GIE+FN+M  ++GV PG++HY
Sbjct: 248  RGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHY 307

Query: 183  ACMVDLLGRAGRLDEAVKLIKGTPMEHSPIVWAALLSVCRIHANVELGEYAAERLIELDA 362
            ACMVDLLGRAGRL+EA++LI+G  ME S IVW ALLS CRIHANVELGE+AA++L+EL++
Sbjct: 308  ACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNS 367

Query: 363  DYDGSYTLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTVSFFAGDRSHP 542
            + DGSYTLLSNIYA+A RWKDVAR+R LMK +G++KRPGCSWVQGKKGT +F+  D++HP
Sbjct: 368  ENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHP 427

Query: 543  LSQEIYEFLGDLIRRIKVIGYVPQTSFALHDVDEEEKSDLLYEHSEKLALAYGILTSAPG 722
             S++IYE L  L +RIKV+GYVP+TSFALHDVD+EEK DLL+EHSEKLALAYGIL SAPG
Sbjct: 428  QSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPG 487

Query: 723  APIRITKNLRVCGDCHNAFTFISKIVNHEII 815
            APIRITKNLRVCGDCHNA T+IS I++HEII
Sbjct: 488  APIRITKNLRVCGDCHNAITYISMIIDHEII 518


>ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
            gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza
            sativa Japonica Group]
          Length = 890

 Score =  407 bits (1045), Expect = e-111
 Identities = 185/271 (68%), Positives = 232/271 (85%)
 Frame = +3

Query: 3    RGEEALQVFNTMQKASLVPDEVTFLVVLYACSHSGMIEKGIEYFNTMQGKYGVAPGKKHY 182
            RG EAL +F+ M+KA  VPD++TFLVVLYACSH GM+++G+ YF++M   YG+ P  +HY
Sbjct: 599  RGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHY 658

Query: 183  ACMVDLLGRAGRLDEAVKLIKGTPMEHSPIVWAALLSVCRIHANVELGEYAAERLIELDA 362
            AC +DLL R+GRLD+A + +K  PME + +VW ALLS CR+H+NVEL E+A  +L+E++A
Sbjct: 659  ACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNA 718

Query: 363  DYDGSYTLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTVSFFAGDRSHP 542
            + DGSYTL+SNIYA+AGRWKDVARIR LMK++G+KKRPGCSWVQG+KGT SFF GDRSHP
Sbjct: 719  ENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHP 778

Query: 543  LSQEIYEFLGDLIRRIKVIGYVPQTSFALHDVDEEEKSDLLYEHSEKLALAYGILTSAPG 722
            LS +IY  L  LI RIK +GYVP+T+FALHDVDEEEK++LL EHSEKLALAYG+LT++PG
Sbjct: 779  LSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPG 838

Query: 723  APIRITKNLRVCGDCHNAFTFISKIVNHEII 815
             PIRITKNLRVCGDCH+AFT+ISKIV+HEI+
Sbjct: 839  CPIRITKNLRVCGDCHSAFTYISKIVDHEIV 869