BLASTX nr result
ID: Coptis21_contig00030895
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030895 (816 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi... 422 e-116 ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containi... 421 e-116 emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera] 421 e-116 ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|2... 417 e-114 ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group] g... 407 e-111 >ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like [Vitis vinifera] Length = 852 Score = 422 bits (1084), Expect = e-116 Identities = 200/271 (73%), Positives = 233/271 (85%) Frame = +3 Query: 3 RGEEALQVFNTMQKASLVPDEVTFLVVLYACSHSGMIEKGIEYFNTMQGKYGVAPGKKHY 182 RGEEALQ+F MQK LVPD VTF+VVLYACSHSGM+++GI YFN M +GV PG +HY Sbjct: 561 RGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHY 620 Query: 183 ACMVDLLGRAGRLDEAVKLIKGTPMEHSPIVWAALLSVCRIHANVELGEYAAERLIELDA 362 ACMVDLL RAGRLDEA++LI+G PM+ +P VW ALLS CR++ANVELGEYAA +L+EL++ Sbjct: 621 ACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELES 680 Query: 363 DYDGSYTLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTVSFFAGDRSHP 542 DGSYTLLSNIYA+A WKDVARIR LMK TG+KKRPGCSWVQG+KGT +FFAGD SHP Sbjct: 681 GNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHP 740 Query: 543 LSQEIYEFLGDLIRRIKVIGYVPQTSFALHDVDEEEKSDLLYEHSEKLALAYGILTSAPG 722 +SQ+IY+ L DL++RIK +GYVP FALHDVD+EEK DLL EHSEKLALAYGILT+APG Sbjct: 741 MSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPG 800 Query: 723 APIRITKNLRVCGDCHNAFTFISKIVNHEII 815 APIRITKNLR CGDCH+AFT+IS I+ HEII Sbjct: 801 APIRITKNLRACGDCHSAFTYISIIIEHEII 831 >ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like [Glycine max] Length = 986 Score = 421 bits (1083), Expect = e-116 Identities = 199/271 (73%), Positives = 232/271 (85%) Frame = +3 Query: 3 RGEEALQVFNTMQKASLVPDEVTFLVVLYACSHSGMIEKGIEYFNTMQGKYGVAPGKKHY 182 RGE+AL+VF+ M+K LVPD +TFLVVLYACSHSGM++ GI +FN M +GV PG +HY Sbjct: 695 RGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHY 754 Query: 183 ACMVDLLGRAGRLDEAVKLIKGTPMEHSPIVWAALLSVCRIHANVELGEYAAERLIELDA 362 ACMVDL GRAGRL EA+KLI PME +P+VW ALLS CR+H+NVELGE+AA RL+EL++ Sbjct: 755 ACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELES 814 Query: 363 DYDGSYTLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTVSFFAGDRSHP 542 DGSYTLLSNIYA+A RWKDVARIR MKRTG+KKRPGCSW+QG+KG +F+ GDRSHP Sbjct: 815 GNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHP 874 Query: 543 LSQEIYEFLGDLIRRIKVIGYVPQTSFALHDVDEEEKSDLLYEHSEKLALAYGILTSAPG 722 SQ+IYE L DLI+RIK IGYVPQTSFALHDVD+EEK DLL+EHSEKLALAYGILT P Sbjct: 875 QSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPR 934 Query: 723 APIRITKNLRVCGDCHNAFTFISKIVNHEII 815 APIRITKNLR+CGDCH+A T+ISKI+ HEII Sbjct: 935 APIRITKNLRICGDCHSAITYISKIIEHEII 965 >emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera] Length = 871 Score = 421 bits (1083), Expect = e-116 Identities = 200/271 (73%), Positives = 233/271 (85%) Frame = +3 Query: 3 RGEEALQVFNTMQKASLVPDEVTFLVVLYACSHSGMIEKGIEYFNTMQGKYGVAPGKKHY 182 RGEEALQ+F MQK LVPD VTF+VVLYACSHSGM+++GI YFN M +GV PG +HY Sbjct: 580 RGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHY 639 Query: 183 ACMVDLLGRAGRLDEAVKLIKGTPMEHSPIVWAALLSVCRIHANVELGEYAAERLIELDA 362 ACMVDLL RAGRLDEA++LI+G PM+ +P VW ALLS CR++ANVELGEYAA +L+EL++ Sbjct: 640 ACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELES 699 Query: 363 DYDGSYTLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTVSFFAGDRSHP 542 DGSYTLLSNIYA+A WKDVARIR LMK TG+KKRPGCSWVQG+KGT +FFAGD SHP Sbjct: 700 GNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHP 759 Query: 543 LSQEIYEFLGDLIRRIKVIGYVPQTSFALHDVDEEEKSDLLYEHSEKLALAYGILTSAPG 722 +SQ+IY+ L DL++RIK +GYVP FALHDVD+EEK DLL EHSEKLALAYGILT+APG Sbjct: 760 MSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPG 819 Query: 723 APIRITKNLRVCGDCHNAFTFISKIVNHEII 815 APIRITKNLR CGDCH+AFT+IS I+ HEII Sbjct: 820 APIRITKNLRACGDCHSAFTYISIIIEHEII 850 >ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa] Length = 539 Score = 417 bits (1071), Expect = e-114 Identities = 197/271 (72%), Positives = 240/271 (88%) Frame = +3 Query: 3 RGEEALQVFNTMQKASLVPDEVTFLVVLYACSHSGMIEKGIEYFNTMQGKYGVAPGKKHY 182 RG+EAL+VF+ M++ L PD VT LVVLYACSHSGMI++GIE+FN+M ++GV PG++HY Sbjct: 248 RGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHY 307 Query: 183 ACMVDLLGRAGRLDEAVKLIKGTPMEHSPIVWAALLSVCRIHANVELGEYAAERLIELDA 362 ACMVDLLGRAGRL+EA++LI+G ME S IVW ALLS CRIHANVELGE+AA++L+EL++ Sbjct: 308 ACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNS 367 Query: 363 DYDGSYTLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTVSFFAGDRSHP 542 + DGSYTLLSNIYA+A RWKDVAR+R LMK +G++KRPGCSWVQGKKGT +F+ D++HP Sbjct: 368 ENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHP 427 Query: 543 LSQEIYEFLGDLIRRIKVIGYVPQTSFALHDVDEEEKSDLLYEHSEKLALAYGILTSAPG 722 S++IYE L L +RIKV+GYVP+TSFALHDVD+EEK DLL+EHSEKLALAYGIL SAPG Sbjct: 428 QSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPG 487 Query: 723 APIRITKNLRVCGDCHNAFTFISKIVNHEII 815 APIRITKNLRVCGDCHNA T+IS I++HEII Sbjct: 488 APIRITKNLRVCGDCHNAITYISMIIDHEII 518 >ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group] gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group] Length = 890 Score = 407 bits (1045), Expect = e-111 Identities = 185/271 (68%), Positives = 232/271 (85%) Frame = +3 Query: 3 RGEEALQVFNTMQKASLVPDEVTFLVVLYACSHSGMIEKGIEYFNTMQGKYGVAPGKKHY 182 RG EAL +F+ M+KA VPD++TFLVVLYACSH GM+++G+ YF++M YG+ P +HY Sbjct: 599 RGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHY 658 Query: 183 ACMVDLLGRAGRLDEAVKLIKGTPMEHSPIVWAALLSVCRIHANVELGEYAAERLIELDA 362 AC +DLL R+GRLD+A + +K PME + +VW ALLS CR+H+NVEL E+A +L+E++A Sbjct: 659 ACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNA 718 Query: 363 DYDGSYTLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTVSFFAGDRSHP 542 + DGSYTL+SNIYA+AGRWKDVARIR LMK++G+KKRPGCSWVQG+KGT SFF GDRSHP Sbjct: 719 ENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHP 778 Query: 543 LSQEIYEFLGDLIRRIKVIGYVPQTSFALHDVDEEEKSDLLYEHSEKLALAYGILTSAPG 722 LS +IY L LI RIK +GYVP+T+FALHDVDEEEK++LL EHSEKLALAYG+LT++PG Sbjct: 779 LSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPG 838 Query: 723 APIRITKNLRVCGDCHNAFTFISKIVNHEII 815 PIRITKNLRVCGDCH+AFT+ISKIV+HEI+ Sbjct: 839 CPIRITKNLRVCGDCHSAFTYISKIVDHEIV 869