BLASTX nr result

ID: Coptis21_contig00030884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030884
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACS94977.1| magnesium chelatase H subunit [Fragaria x ananassa]     58   1e-06
ref|XP_004162182.1| PREDICTED: magnesium-chelatase subunit ChlH,...    56   3e-06
ref|XP_004149397.1| PREDICTED: magnesium-chelatase subunit ChlH,...    56   3e-06
gb|AAB97152.1| Mg protoporphyrin IX chelatase [Nicotiana tabacum]      55   7e-06
gb|AFW59876.1| hypothetical protein ZEAMMB73_008702 [Zea mays]         55   7e-06

>gb|ACS94977.1| magnesium chelatase H subunit [Fragaria x ananassa]
          Length = 1381

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
 Frame = +1

Query: 187 VPFIVALLLVCQTN*KVVE*YLRLHPIQVALQVDFP*VNGGVHPIFLS*RDLRTGE-CSF 363
           VP+IVAL LV QT  + +   L LHPIQVALQV  P ++GG+ PI  + RD RTG+ CSF
Sbjct: 416 VPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPRTGKSCSF 475


>ref|XP_004162182.1| PREDICTED: magnesium-chelatase subunit ChlH, chloroplastic-like
           [Cucumis sativus]
          Length = 1382

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/56 (57%), Positives = 39/56 (69%)
 Frame = +1

Query: 187 VPFIVALLLVCQTN*KVVE*YLRLHPIQVALQVDFP*VNGGVHPIFLS*RDLRTGE 354
           VP+IVAL LV QT  + +   L LHPIQVALQV  P ++GG+ PI  S RD RTG+
Sbjct: 416 VPYIVALPLVFQTTEEWLNGTLGLHPIQVALQVALPELDGGMEPIVFSGRDPRTGK 471


>ref|XP_004149397.1| PREDICTED: magnesium-chelatase subunit ChlH, chloroplastic-like
           [Cucumis sativus]
          Length = 1382

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/56 (57%), Positives = 39/56 (69%)
 Frame = +1

Query: 187 VPFIVALLLVCQTN*KVVE*YLRLHPIQVALQVDFP*VNGGVHPIFLS*RDLRTGE 354
           VP+IVAL LV QT  + +   L LHPIQVALQV  P ++GG+ PI  S RD RTG+
Sbjct: 416 VPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFSGRDPRTGK 471


>gb|AAB97152.1| Mg protoporphyrin IX chelatase [Nicotiana tabacum]
          Length = 1382

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = +1

Query: 187 VPFIVALLLVCQTN*KVVE*YLRLHPIQVALQVDFP*VNGGVHPIFLS*RDLRTGE 354
           VP+IVAL LV QT  + +   L LHPIQVALQV  P ++GG+ PI  + RD RTG+
Sbjct: 416 VPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPRTGK 471


>gb|AFW59876.1| hypothetical protein ZEAMMB73_008702 [Zea mays]
          Length = 1379

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = +1

Query: 187 VPFIVALLLVCQTN*KVVE*YLRLHPIQVALQVDFP*VNGGVHPIFLS*RDLRTGE 354
           VP+IVAL LV QT  + +   L LHPIQVALQV  P ++GG+ PI  + RD RTG+
Sbjct: 413 VPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPRTGK 468


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