BLASTX nr result

ID: Coptis21_contig00030874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030874
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314926.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_002519198.1| calmodulin-binding transcription activator (...   110   1e-22
ref|XP_002312343.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
ref|XP_002272118.2| PREDICTED: calmodulin-binding transcription ...   104   8e-21
emb|CAN70197.1| hypothetical protein VITISV_010763 [Vitis vinifera]   104   8e-21

>ref|XP_002314926.1| predicted protein [Populus trichocarpa] gi|222863966|gb|EEF01097.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  113 bits (283), Expect = 2e-23
 Identities = 66/185 (35%), Positives = 97/185 (52%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1   LGSSNMYGATSCLRNQIKLMAGNGSLDSELPTCAYSEVTGDEMNSYAEEKQFEMLTAGMD 180
           L   ++    S L N  K +  +G+     P   YS++T  ++NS A+ K    +  G  
Sbjct: 250 LSGYHLSAEMSTLGNLTKSIVRSGNTQFNSPDSVYSQLTSAQVNSDAQRKG--SIVPGTS 307

Query: 181 ESSYMVGNDGSQIQDSCGRGAKNMKTESPSSMDDLLAQSPVSTGQGSSTSTIXXXXXXXX 360
           +S   + NDG Q QDS GR   ++   SP S+DD + +S +S+G  S  S          
Sbjct: 308 DSLNNLFNDGLQSQDSFGRWMSSIIDHSPCSVDDAVLESSISSGHDSFASPGIDQHQSSV 367

Query: 361 XXXXXSVTDISPSWGFSTEETKVIVIGYFHGAHSHLA--NLYCVFGNTCVTAEMVQVGVF 534
                 +TD SP+W FS E TK++V GYFH  + HLA  NL+C+ G+T   AE+VQVGV+
Sbjct: 368 QEQTFIITDFSPAWAFSNETTKILVTGYFHEQYQHLAKSNLFCICGDTFARAEIVQVGVY 427

Query: 535 RCIAP 549
             + P
Sbjct: 428 SFMLP 432


>ref|XP_002519198.1| calmodulin-binding transcription activator (camta), plants,
           putative [Ricinus communis] gi|223541513|gb|EEF43062.1|
           calmodulin-binding transcription activator (camta),
           plants, putative [Ricinus communis]
          Length = 918

 Score =  110 bits (276), Expect = 1e-22
 Identities = 65/183 (35%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
 Frame = +1

Query: 1   LGSSNMYGATSCLRNQIKLMAGNGSLDSELPTCAYSEVTGDEMNSYAEEKQFEMLTAGMD 180
           L   N+    S L N  K +  +      +P   Y + TG ++NS  ++K    L  G  
Sbjct: 246 LSPYNLSAEISPLDNLTKPVVRSNDSHFSIPDNEYIQSTGVQVNSNVQQKGSNFLGTG-- 303

Query: 181 ESSYMVGNDGSQIQDSCGRGAKNMKTESPSSMDDLLAQSPVSTGQGSSTSTIXXXXXXXX 360
           ++  M+ NDG Q QDS GR    +  +SP S+D+ + +S  S+G  SSTS          
Sbjct: 304 DTLDMLVNDGLQSQDSFGRWIDYIIADSPGSVDNAVLESSFSSGLDSSTSPAIDQLQSSV 363

Query: 361 XXXXXSVTDISPSWGFSTEETKVIVIGYFHGAHSHLA--NLYCVFGNTCVTAEMVQVGVF 534
                 +TDISP+W FSTE TK++V+GYFH  +  LA  N++CV G+     ++VQ GV+
Sbjct: 364 PEQIFVITDISPAWAFSTETTKILVVGYFHEQYLQLAKSNMFCVCGDAYALVDIVQTGVY 423

Query: 535 RCI 543
           RC+
Sbjct: 424 RCL 426


>ref|XP_002312343.1| predicted protein [Populus trichocarpa] gi|222852163|gb|EEE89710.1|
           predicted protein [Populus trichocarpa]
          Length = 845

 Score =  107 bits (266), Expect = 2e-21
 Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 2/149 (1%)
 Frame = +1

Query: 103 YSEVTGDEMNSYAEEKQFEMLTAGMDESSYMVGNDGSQIQDSCGRGAKNMKTESPSSMDD 282
           Y ++TG ++   A+ K   +L  G  +S  ++ NDG Q QDS GR   ++  +SP S+DD
Sbjct: 214 YRQLTGSQVYLDAQRKNSVVL--GARDSLDILINDGLQSQDSFGRWMNSIIDDSPVSVDD 271

Query: 283 LLAQSPVSTGQGSSTSTIXXXXXXXXXXXXXSVTDISPSWGFSTEETKVIVIGYFHGAHS 462
              +SP+S+G  S  S                +TD SP+WGFS E TK++V GYFH  + 
Sbjct: 272 ATVESPISSGYDSFASPGMDQHQSSIQEQMFIITDFSPAWGFSNETTKILVTGYFHEQYL 331

Query: 463 HLA--NLYCVFGNTCVTAEMVQVGVFRCI 543
           HLA  NL+C+ G+  V AE+VQ GV+ C+
Sbjct: 332 HLAKSNLFCICGDAFVPAEIVQAGVYSCM 360


>ref|XP_002272118.2| PREDICTED: calmodulin-binding transcription activator 5-like [Vitis
           vinifera] gi|296083270|emb|CBI22906.3| unnamed protein
           product [Vitis vinifera]
          Length = 927

 Score =  104 bits (260), Expect = 8e-21
 Identities = 62/175 (35%), Positives = 92/175 (52%), Gaps = 2/175 (1%)
 Frame = +1

Query: 31  SCLRNQIKLMAGNGSLDSELPTCAYSEVTGDEMNSYAEEKQFEMLTAGMDESSYMVGNDG 210
           S L N  + +AGN S         Y +  G ++N   + +  + +  G  +   ++  D 
Sbjct: 269 SPLGNPAESIAGNESAHFNFLDDVYFQKIGGQVNPNGQRR--DSVAVGTGDPVDILLKDS 326

Query: 211 SQIQDSCGRGAKNMKTESPSSMDDLLAQSPVSTGQGSSTSTIXXXXXXXXXXXXXSVTDI 390
            + QDS GR    + T+SP S+DD    SPVS+   S  S               S+TD 
Sbjct: 327 LEPQDSFGRWMNYIMTDSPVSVDDPSLGSPVSSSHDSVVSAAGNHQQSSVPDTIFSITDF 386

Query: 391 SPSWGFSTEETKVIVIGYFHGAHSHLA--NLYCVFGNTCVTAEMVQVGVFRCIAP 549
           SPSW  STE+TK++VIG+ H  ++ LA  NL+ V G+ CV AE++Q+GVFRC+ P
Sbjct: 387 SPSWAISTEKTKILVIGFLHENYADLAKSNLFFVCGDVCVPAEIIQLGVFRCLVP 441


>emb|CAN70197.1| hypothetical protein VITISV_010763 [Vitis vinifera]
          Length = 907

 Score =  104 bits (260), Expect = 8e-21
 Identities = 62/175 (35%), Positives = 92/175 (52%), Gaps = 2/175 (1%)
 Frame = +1

Query: 31  SCLRNQIKLMAGNGSLDSELPTCAYSEVTGDEMNSYAEEKQFEMLTAGMDESSYMVGNDG 210
           S L N  + +AGN S         Y +  G ++N   + +  + +  G  +   ++  D 
Sbjct: 272 SPLGNPAESIAGNESAHFNFLDDVYFQKIGGQVNPNGQRR--DSVAVGTGDPVDILLKDS 329

Query: 211 SQIQDSCGRGAKNMKTESPSSMDDLLAQSPVSTGQGSSTSTIXXXXXXXXXXXXXSVTDI 390
            + QDS GR    + T+SP S+DD    SPVS+   S  S               S+TD 
Sbjct: 330 LEPQDSFGRWMNYIMTDSPVSVDDPSLGSPVSSSHDSVVSAAGNHQQSSVPDTIFSITDF 389

Query: 391 SPSWGFSTEETKVIVIGYFHGAHSHLA--NLYCVFGNTCVTAEMVQVGVFRCIAP 549
           SPSW  STE+TK++VIG+ H  ++ LA  NL+ V G+ CV AE++Q+GVFRC+ P
Sbjct: 390 SPSWAISTEKTKILVIGFLHENYADLAKSNLFFVCGDVCVPAEIIQLGVFRCLVP 444


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