BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030872
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containi...   267   6e-70
emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]   267   6e-70
gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arab...   218   3e-55
ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Ar...   218   3e-55
ref|XP_002880144.1| pentatricopeptide repeat-containing protein ...   217   7e-55

>ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
           [Vitis vinifera] gi|297734603|emb|CBI16654.3| unnamed
           protein product [Vitis vinifera]
          Length = 577

 Score =  267 bits (683), Expect = 6e-70
 Identities = 118/169 (69%), Positives = 144/169 (85%)
 Frame = -2

Query: 508 PNEITMIGVLSACNHAGLVDEGKKWFKLMENYGIIPRIEHYGCMVDILGRAGCVEEAEEL 329
           PNEITMIGVLSACNH+GLV+EGK+WFK ME +G+ P+IEHYGCMVD+LGRAGC++EAE+L
Sbjct: 382 PNEITMIGVLSACNHSGLVEEGKRWFKAMEEFGLTPKIEHYGCMVDLLGRAGCLQEAEKL 441

Query: 328 MMDMPYEPNSIILSSFLFACGFHGDVMRAEKFMRKAFDIEPWNDGNYVMMRNLYAGEKRW 149
           M  MPYE N IILSSFLFACG+  DV RAE+ +++A  +E WNDGNY+M+RNLYA EKRW
Sbjct: 442 MESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRW 501

Query: 148 KEVEEMRGVMRKYRAKKEVGCSVIEVNNRVWEFVAGDRAHLQWEGIHPV 2
           KE +E++G+MR+   KKE GCS IEV++RVWEFVAGDR H +WE IH V
Sbjct: 502 KEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHSV 550


>emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
          Length = 751

 Score =  267 bits (683), Expect = 6e-70
 Identities = 118/169 (69%), Positives = 144/169 (85%)
 Frame = -2

Query: 508  PNEITMIGVLSACNHAGLVDEGKKWFKLMENYGIIPRIEHYGCMVDILGRAGCVEEAEEL 329
            PNEITMIGVLSACNH+GLV+EGK+WFK ME +G+ P+IEHYGCMVD+LGRAGC++EAE+L
Sbjct: 556  PNEITMIGVLSACNHSGLVEEGKRWFKAMEEFGLTPKIEHYGCMVDLLGRAGCLQEAEKL 615

Query: 328  MMDMPYEPNSIILSSFLFACGFHGDVMRAEKFMRKAFDIEPWNDGNYVMMRNLYAGEKRW 149
            M  MPYE N IILSSFLFACG+  DV RAE+ +++A  +E WNDGNY+M+RNLYA EKRW
Sbjct: 616  MESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRW 675

Query: 148  KEVEEMRGVMRKYRAKKEVGCSVIEVNNRVWEFVAGDRAHLQWEGIHPV 2
            KE +E++G+MR+   KKE GCS IEV++RVWEFVAGDR H +WE IH V
Sbjct: 676  KEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHSV 724


>gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 555

 Score =  218 bits (556), Expect = 3e-55
 Identities = 99/169 (58%), Positives = 133/169 (78%)
 Frame = -2

Query: 508 PNEITMIGVLSACNHAGLVDEGKKWFKLMENYGIIPRIEHYGCMVDILGRAGCVEEAEEL 329
           P+EITM+ V++ACNH GLV+EG+KWF +M   G+  +IEHYGCMVD+LGRAG ++EAE+L
Sbjct: 372 PDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDL 431

Query: 328 MMDMPYEPNSIILSSFLFACGFHGDVMRAEKFMRKAFDIEPWNDGNYVMMRNLYAGEKRW 149
           + +MP+EPN IILSSFL ACG + D+ RAE+ ++KA ++EP NDGNYV++RNLYA +KRW
Sbjct: 432 ITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRW 491

Query: 148 KEVEEMRGVMRKYRAKKEVGCSVIEVNNRVWEFVAGDRAHLQWEGIHPV 2
            +   ++ VMRK +AKKEVGCS+IE+N  V EF++GD  H     IH V
Sbjct: 492 DDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLV 540


>ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g44880 gi|2344896|gb|AAC31836.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255385|gb|AEC10479.1|
           Pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 555

 Score =  218 bits (556), Expect = 3e-55
 Identities = 99/169 (58%), Positives = 133/169 (78%)
 Frame = -2

Query: 508 PNEITMIGVLSACNHAGLVDEGKKWFKLMENYGIIPRIEHYGCMVDILGRAGCVEEAEEL 329
           P+EITM+ V++ACNH GLV+EG+KWF +M   G+  +IEHYGCMVD+LGRAG ++EAE+L
Sbjct: 372 PDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDL 431

Query: 328 MMDMPYEPNSIILSSFLFACGFHGDVMRAEKFMRKAFDIEPWNDGNYVMMRNLYAGEKRW 149
           + +MP+EPN IILSSFL ACG + D+ RAE+ ++KA ++EP NDGNYV++RNLYA +KRW
Sbjct: 432 ITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRW 491

Query: 148 KEVEEMRGVMRKYRAKKEVGCSVIEVNNRVWEFVAGDRAHLQWEGIHPV 2
            +   ++ VMRK +AKKEVGCS+IE+N  V EF++GD  H     IH V
Sbjct: 492 DDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLV 540


>ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325983|gb|EFH56403.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 555

 Score =  217 bits (553), Expect = 7e-55
 Identities = 97/169 (57%), Positives = 134/169 (79%)
 Frame = -2

Query: 508 PNEITMIGVLSACNHAGLVDEGKKWFKLMENYGIIPRIEHYGCMVDILGRAGCVEEAEEL 329
           P+EITM+ V+SACNH GLV+EG+KWF++M  +G+  +IEHYGCMVD+LGRAG +++AE L
Sbjct: 372 PDEITMLAVISACNHGGLVEEGRKWFQMMRKFGLNAKIEHYGCMVDLLGRAGNLKQAEHL 431

Query: 328 MMDMPYEPNSIILSSFLFACGFHGDVMRAEKFMRKAFDIEPWNDGNYVMMRNLYAGEKRW 149
           + +MP++PN IILSSFL ACG + D+ RAE+ ++KA ++EP NDGNYV++RNLYA +KRW
Sbjct: 432 ITNMPFKPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRW 491

Query: 148 KEVEEMRGVMRKYRAKKEVGCSVIEVNNRVWEFVAGDRAHLQWEGIHPV 2
            +   ++ +MRK  AKKEVGCS+IE+N  V EF++GD  H   + IH V
Sbjct: 492 DDFGMVKNMMRKNEAKKEVGCSLIEINYIVSEFISGDTTHPHRQSIHLV 540