BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030870
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containi...   198   4e-49
emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]   198   4e-49
ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containi...   181   7e-44
ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containi...   171   7e-41

>ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 533

 Score =  198 bits (503), Expect = 4e-49
 Identities = 95/122 (77%), Positives = 107/122 (87%)
 Frame = +2

Query: 8   DMGTARRLFDRIPKKDVVLWTAMIDGYGKVGDVKEARVLFDEMSERNVISWSAMMAAYSR 187
           DMGTAR LFDRIP +DVVLWTAMIDGYGK+GDV+ AR+LF++M ERN ISWSA+MAAYSR
Sbjct: 164 DMGTARTLFDRIPNRDVVLWTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSR 223

Query: 188 VSEFKEVLSLFREMQEVGTIPNDSVLVSVLTACANLGALAQGFWVHSYVKHHNLDSNTIL 367
           V +FKEVL LFR MQE GT+PN+SVLVSVLTACA+LGALAQG WVHSY K  N DSN IL
Sbjct: 224 VGDFKEVLCLFRRMQEAGTMPNESVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPIL 283

Query: 368 ST 373
           +T
Sbjct: 284 AT 285


>emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
          Length = 805

 Score =  198 bits (503), Expect = 4e-49
 Identities = 95/122 (77%), Positives = 107/122 (87%)
 Frame = +2

Query: 8   DMGTARRLFDRIPKKDVVLWTAMIDGYGKVGDVKEARVLFDEMSERNVISWSAMMAAYSR 187
           DMGTAR LFDRIP +DVVLWTAMIDGYGK+GDV+ AR+LF++M ERN ISWSA+MAAYSR
Sbjct: 436 DMGTARTLFDRIPNRDVVLWTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSR 495

Query: 188 VSEFKEVLSLFREMQEVGTIPNDSVLVSVLTACANLGALAQGFWVHSYVKHHNLDSNTIL 367
           V +FKEVL LFR MQE GT+PN+SVLVSVLTACA+LGALAQG WVHSY K  N DSN IL
Sbjct: 496 VGDFKEVLCLFRRMQEAGTMPNESVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPIL 555

Query: 368 ST 373
           +T
Sbjct: 556 AT 557


>ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 487

 Score =  182 bits (462), Expect = 2e-44
 Identities = 86/122 (70%), Positives = 103/122 (84%)
 Frame = +2

Query: 8   DMGTARRLFDRIPKKDVVLWTAMIDGYGKVGDVKEARVLFDEMSERNVISWSAMMAAYSR 187
           D+  AR LFD+   KDVV+WT M+DGYGKVGD++ ARVLFDEM ERNVISWSAMMAAYSR
Sbjct: 161 DLKVARVLFDKSSGKDVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSR 220

Query: 188 VSEFKEVLSLFREMQEVGTIPNDSVLVSVLTACANLGALAQGFWVHSYVKHHNLDSNTIL 367
           VS+F+EVL LFR+MQ+   +PNDSV+VSVLTACA+LGA+ QG W+HSY K + LDSN IL
Sbjct: 221 VSDFREVLCLFRQMQKKNIVPNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPIL 280

Query: 368 ST 373
           +T
Sbjct: 281 AT 282


>ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 528

 Score =  181 bits (458), Expect = 7e-44
 Identities = 85/122 (69%), Positives = 102/122 (83%)
 Frame = +2

Query: 8   DMGTARRLFDRIPKKDVVLWTAMIDGYGKVGDVKEARVLFDEMSERNVISWSAMMAAYSR 187
           D+  AR LFD+   KDVV+WT M+DGYGKVGD++ ARVLFDEM ERNVISWSAMMAAYSR
Sbjct: 161 DLKVARVLFDKSSGKDVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSR 220

Query: 188 VSEFKEVLSLFREMQEVGTIPNDSVLVSVLTACANLGALAQGFWVHSYVKHHNLDSNTIL 367
           VS+F+EVL LFR+MQ+   +PNDSV+ SVLTACA+LGA+ QG W+HSY K + LDSN IL
Sbjct: 221 VSDFREVLCLFRQMQKKNIVPNDSVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPIL 280

Query: 368 ST 373
           +T
Sbjct: 281 AT 282


>ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 526

 Score =  171 bits (432), Expect = 7e-41
 Identities = 83/122 (68%), Positives = 101/122 (82%)
 Frame = +2

Query: 8   DMGTARRLFDRIPKKDVVLWTAMIDGYGKVGDVKEARVLFDEMSERNVISWSAMMAAYSR 187
           ++ TAR LFD    KDVVL TAM+DGYGK+G+VK AR +FD+M ERN +SWSAMMAAYSR
Sbjct: 160 EVDTARVLFDETSYKDVVLGTAMVDGYGKMGNVKSAREVFDKMPERNAVSWSAMMAAYSR 219

Query: 188 VSEFKEVLSLFREMQEVGTIPNDSVLVSVLTACANLGALAQGFWVHSYVKHHNLDSNTIL 367
           VS+FKEVL+LF EMQ  GT PN+S+LV+VLTACA+LGAL QG WVHSY +  +L+SN IL
Sbjct: 220 VSDFKEVLALFTEMQNEGTEPNESILVTVLTACAHLGALTQGLWVHSYARRFHLESNPIL 279

Query: 368 ST 373
           +T
Sbjct: 280 AT 281



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/88 (35%), Positives = 54/88 (61%)
 Frame = +2

Query: 59  VLWTAMIDGYGKVGDVKEARVLFDEMSERNVISWSAMMAAYSRVSEFKEVLSLFREMQEV 238
           +L TA++D Y K G V+ A  +FD + +++  +W+AM++  +   +  + L LFR+M   
Sbjct: 278 ILATALVDMYSKCGCVESALSVFDCIVDKDAGAWNAMISGEALNGDAGKSLQLFRQMAAS 337

Query: 239 GTIPNDSVLVSVLTACANLGALAQGFWV 322
            T PN++  V+VLTAC +   + QG W+
Sbjct: 338 RTKPNETTFVAVLTACTHAKMVQQGLWL 365