BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030863
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   350   2e-94
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   349   2e-94
emb|CBI26570.3| unnamed protein product [Vitis vinifera]              349   2e-94
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2...   339   3e-91
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...   338   7e-91

>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  350 bits (897), Expect = 2e-94
 Identities = 171/213 (80%), Positives = 192/213 (90%)
 Frame = -3

Query: 640 LELYEWLNLRQWYSPNARMLATILSVLGKANQEKLAVELFTRAEPGVGDTVQVYNAMMGV 461
           LE+YEWLNLR WYSPNARMLATILSVLGKANQE LAVE+F RAE   G+TVQVYNAMMGV
Sbjct: 204 LEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFARAEAAXGNTVQVYNAMMGV 263

Query: 460 YSRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLR 281
           Y+R GRF KVQELL+LM+SRGCEPDLVSFNTLINAR KS T++  +AI+LLNEVR+SG++
Sbjct: 264 YARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQ 323

Query: 280 PDIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERL 101
           PDIITYNTLISACSR S+L+EAVK+YND+ A  CQPDLWTYNAM+SVYGRCG + EA RL
Sbjct: 324 PDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRL 383

Query: 100 FKELGSKGFLPDAVTYNSLLYAFAREGNVGRVK 2
           FK+L SKGFLPDAVTYNSLLYAFAREGNV +VK
Sbjct: 384 FKDLESKGFLPDAVTYNSLLYAFAREGNVDKVK 416



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 54/190 (28%), Positives = 98/190 (51%), Gaps = 1/190 (0%)
 Frame = -3

Query: 574 ILSVLGKANQEKLAVELFTRAEP-GVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSRG 398
           ++SV G+    + A  LF   E  G       YN+++  ++R G   KV+E+ E M   G
Sbjct: 367 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 426

Query: 397 CEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLKE 218
              D +++NT+I+   K       +A +L ++++ SG  PD +TY  LI +  + + +KE
Sbjct: 427 FGKDEMTYNTIIHMYGKRGQ--HDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKE 484

Query: 217 AVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLLY 38
           A ++ +++  +  +P L T++A++  Y + GK  EAE  F  +   G  PD + Y+ +L 
Sbjct: 485 AAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLD 544

Query: 37  AFAREGNVGR 8
              R    G+
Sbjct: 545 ILLRFNESGK 554



 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 46/196 (23%), Positives = 100/196 (51%), Gaps = 1/196 (0%)
 Frame = -3

Query: 604  YSPNARMLATILSVLGKANQEKLAVELFTRAEPGV-GDTVQVYNAMMGVYSRNGRFAKVQ 428
            Y P   +   ++ +L K  + +    + +  E       + ++N+++ +Y+  G F K  
Sbjct: 915  YFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTG 974

Query: 427  ELLELMKSRGCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLIS 248
            ++ +L++  G +PD  ++NTLI    +     P   + L++E+R+ GL P + TY +LIS
Sbjct: 975  QVYQLIQEAGLKPDEDTYNTLILMYCRDRR--PEEGLSLMHEMRRVGLEPKLDTYKSLIS 1032

Query: 247  ACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKELGSKGFLP 68
            A  +   +++A +++  L +  C+ D   Y+ M+ ++   G  ++AE+L   +   G  P
Sbjct: 1033 AFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEP 1092

Query: 67   DAVTYNSLLYAFAREG 20
               T + L+ +++  G
Sbjct: 1093 TIATMHLLMVSYSGSG 1108



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
 Frame = -3

Query: 505  GVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAK-SDTLLP 329
            G   T+ +Y  M+G+ ++  R   V+ ++  M+    +PDL  +N+++       D    
Sbjct: 914  GYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKT 973

Query: 328  GVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAM 149
            G   +L+ E   +GL+PD  TYNTLI    R    +E + + +++     +P L TY ++
Sbjct: 974  GQVYQLIQE---AGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSL 1030

Query: 148  LSVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLLYAFAREGN 17
            +S +G+     +AE LF+ L SK    D   Y+ ++  F   GN
Sbjct: 1031 ISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGN 1074



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 38/164 (23%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
 Frame = -3

Query: 577 TILSVLGKANQEKLAVELFTRAE-PGVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSR 401
           TI+ + GK  Q  LA +L++  +  G       Y  ++    +     +  E++  M + 
Sbjct: 436 TIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNA 495

Query: 400 GCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLK 221
             +P L +F+ LI   AK+   +   A +  + + +SG++PD + Y+ ++    R ++  
Sbjct: 496 XVKPTLRTFSALICGYAKAGKRVE--AEETFDCMLRSGIKPDHLAYSVMLDILLRFNESG 553

Query: 220 EAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKEL 89
           +A+K+Y ++   S +PD   Y  ML V G+  +  +  ++ K++
Sbjct: 554 KAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDM 597



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 34/166 (20%), Positives = 80/166 (48%)
 Frame = -3

Query: 520  TRAEPGVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSD 341
            T    G   TV   N +M     +GR  ++  +++ ++  G +    S   +++A A + 
Sbjct: 839  TMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAG 898

Query: 340  TLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWT 161
             +      K+   ++ +G  P +  Y  +I   ++G  +++   + +++E +  +PDL  
Sbjct: 899  NIFE--VKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSI 956

Query: 160  YNAMLSVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLLYAFARE 23
            +N++L +Y   G   +  ++++ +   G  PD  TYN+L+  + R+
Sbjct: 957  WNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRD 1002


>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  349 bits (896), Expect = 2e-94
 Identities = 171/213 (80%), Positives = 192/213 (90%)
 Frame = -3

Query: 640 LELYEWLNLRQWYSPNARMLATILSVLGKANQEKLAVELFTRAEPGVGDTVQVYNAMMGV 461
           LE+YEWLNLR WYSPNARMLATILSVLGKANQE LAVE+F RAE   G+TVQVYNAMMGV
Sbjct: 172 LEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFARAEAASGNTVQVYNAMMGV 231

Query: 460 YSRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLR 281
           Y+R GRF KVQELL+LM+SRGCEPDLVSFNTLINAR KS T++  +AI+LLNEVR+SG++
Sbjct: 232 YARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQ 291

Query: 280 PDIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERL 101
           PDIITYNTLISACSR S+L+EAVK+YND+ A  CQPDLWTYNAM+SVYGRCG + EA RL
Sbjct: 292 PDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRL 351

Query: 100 FKELGSKGFLPDAVTYNSLLYAFAREGNVGRVK 2
           FK+L SKGFLPDAVTYNSLLYAFAREGNV +VK
Sbjct: 352 FKDLESKGFLPDAVTYNSLLYAFAREGNVDKVK 384



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 54/190 (28%), Positives = 98/190 (51%), Gaps = 1/190 (0%)
 Frame = -3

Query: 574 ILSVLGKANQEKLAVELFTRAEP-GVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSRG 398
           ++SV G+    + A  LF   E  G       YN+++  ++R G   KV+E+ E M   G
Sbjct: 335 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 394

Query: 397 CEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLKE 218
              D +++NT+I+   K       +A +L ++++ SG  PD +TY  LI +  + + +KE
Sbjct: 395 FGKDEMTYNTIIHMYGKRGQ--HDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKE 452

Query: 217 AVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLLY 38
           A ++ +++  +  +P L T++A++  Y + GK  EAE  F  +   G  PD + Y+ +L 
Sbjct: 453 AAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLD 512

Query: 37  AFAREGNVGR 8
              R    G+
Sbjct: 513 ILLRFNESGK 522



 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 46/196 (23%), Positives = 100/196 (51%), Gaps = 1/196 (0%)
 Frame = -3

Query: 604  YSPNARMLATILSVLGKANQEKLAVELFTRAEPG-VGDTVQVYNAMMGVYSRNGRFAKVQ 428
            Y P   +   ++ +L K  + +    + +  E       + ++N+++ +Y+  G F K  
Sbjct: 883  YFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTG 942

Query: 427  ELLELMKSRGCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLIS 248
            ++ +L++  G +PD  ++NTLI    +     P   + L++E+R+ GL P + TY +LIS
Sbjct: 943  QVYQLIQEAGLKPDEDTYNTLILMYCRDRR--PEEGLSLMHEMRRVGLEPKLDTYKSLIS 1000

Query: 247  ACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKELGSKGFLP 68
            A  +   +++A +++  L +  C+ D   Y+ M+ ++   G  ++AE+L   +   G  P
Sbjct: 1001 AFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEP 1060

Query: 67   DAVTYNSLLYAFAREG 20
               T + L+ +++  G
Sbjct: 1061 TIATMHLLMVSYSGSG 1076



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
 Frame = -3

Query: 505  GVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAK-SDTLLP 329
            G   T+ +Y  M+G+ ++  R   V+ ++  M+    +PDL  +N+++       D    
Sbjct: 882  GYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKT 941

Query: 328  GVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAM 149
            G   +L+ E   +GL+PD  TYNTLI    R    +E + + +++     +P L TY ++
Sbjct: 942  GQVYQLIQE---AGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSL 998

Query: 148  LSVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLLYAFAREGN 17
            +S +G+     +AE LF+ L SK    D   Y+ ++  F   GN
Sbjct: 999  ISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGN 1042



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/164 (23%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
 Frame = -3

Query: 577 TILSVLGKANQEKLAVELFTRAE-PGVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSR 401
           TI+ + GK  Q  LA +L++  +  G       Y  ++    +     +  E++  M + 
Sbjct: 404 TIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNA 463

Query: 400 GCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLK 221
             +P L +F+ LI   AK+   +   A +  + + +SG++PD + Y+ ++    R ++  
Sbjct: 464 RVKPTLRTFSALICGYAKAGKRVE--AEETFDCMLRSGIKPDHLAYSVMLDILLRFNESG 521

Query: 220 EAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKEL 89
           +A+K+Y ++   S +PD   Y  ML V G+  +  +  ++ K++
Sbjct: 522 KAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDM 565



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 34/166 (20%), Positives = 80/166 (48%)
 Frame = -3

Query: 520  TRAEPGVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSD 341
            T    G   TV   N +M     +GR  ++  +++ ++  G +    S   +++A A + 
Sbjct: 807  TMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAG 866

Query: 340  TLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWT 161
             +      K+   ++ +G  P +  Y  +I   ++G  +++   + +++E +  +PDL  
Sbjct: 867  NIFE--VKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSI 924

Query: 160  YNAMLSVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLLYAFARE 23
            +N++L +Y   G   +  ++++ +   G  PD  TYN+L+  + R+
Sbjct: 925  WNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRD 970


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  349 bits (896), Expect = 2e-94
 Identities = 171/213 (80%), Positives = 192/213 (90%)
 Frame = -3

Query: 640 LELYEWLNLRQWYSPNARMLATILSVLGKANQEKLAVELFTRAEPGVGDTVQVYNAMMGV 461
           LE+YEWLNLR WYSPNARMLATILSVLGKANQE LAVE+F RAE   G+TVQVYNAMMGV
Sbjct: 147 LEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFARAEAASGNTVQVYNAMMGV 206

Query: 460 YSRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLR 281
           Y+R GRF KVQELL+LM+SRGCEPDLVSFNTLINAR KS T++  +AI+LLNEVR+SG++
Sbjct: 207 YARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQ 266

Query: 280 PDIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERL 101
           PDIITYNTLISACSR S+L+EAVK+YND+ A  CQPDLWTYNAM+SVYGRCG + EA RL
Sbjct: 267 PDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRL 326

Query: 100 FKELGSKGFLPDAVTYNSLLYAFAREGNVGRVK 2
           FK+L SKGFLPDAVTYNSLLYAFAREGNV +VK
Sbjct: 327 FKDLESKGFLPDAVTYNSLLYAFAREGNVDKVK 359



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 54/190 (28%), Positives = 98/190 (51%), Gaps = 1/190 (0%)
 Frame = -3

Query: 574 ILSVLGKANQEKLAVELFTRAEP-GVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSRG 398
           ++SV G+    + A  LF   E  G       YN+++  ++R G   KV+E+ E M   G
Sbjct: 310 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 369

Query: 397 CEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLKE 218
              D +++NT+I+   K       +A +L ++++ SG  PD +TY  LI +  + + +KE
Sbjct: 370 FGKDEMTYNTIIHMYGKRGQ--HDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKE 427

Query: 217 AVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLLY 38
           A ++ +++  +  +P L T++A++  Y + GK  EAE  F  +   G  PD + Y+ +L 
Sbjct: 428 AAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLD 487

Query: 37  AFAREGNVGR 8
              R    G+
Sbjct: 488 ILLRFNESGK 497



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/164 (23%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
 Frame = -3

Query: 577 TILSVLGKANQEKLAVELFTRAE-PGVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSR 401
           TI+ + GK  Q  LA +L++  +  G       Y  ++    +     +  E++  M + 
Sbjct: 379 TIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNA 438

Query: 400 GCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLK 221
             +P L +F+ LI   AK+   +   A +  + + +SG++PD + Y+ ++    R ++  
Sbjct: 439 RVKPTLRTFSALICGYAKAGKRVE--AEETFDCMLRSGIKPDHLAYSVMLDILLRFNESG 496

Query: 220 EAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKEL 89
           +A+K+Y ++   S +PD   Y  ML V G+  +  +  ++ K++
Sbjct: 497 KAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDM 540


>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
           predicted protein [Populus trichocarpa]
          Length = 1480

 Score =  339 bits (869), Expect = 3e-91
 Identities = 162/213 (76%), Positives = 190/213 (89%)
 Frame = -3

Query: 640 LELYEWLNLRQWYSPNARMLATILSVLGKANQEKLAVELFTRAEPGVGDTVQVYNAMMGV 461
           LE+YEWLNLR WYSPNARML+TILSVLGKANQE LAVE+F RAEP  G+TVQVYNAMMGV
Sbjct: 204 LEVYEWLNLRHWYSPNARMLSTILSVLGKANQEALAVEVFMRAEPSAGNTVQVYNAMMGV 263

Query: 460 YSRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLR 281
           Y+R GRF KVQELL+LM+ RGC+PDLVSFNTLINAR K+  ++P +AI+LLNEVR+SGLR
Sbjct: 264 YARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLR 323

Query: 280 PDIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERL 101
           PD ITYNTLISACSR S+L+EA K+++D+EA  CQPDLWTYNAM+SVYGRCG + +AE+L
Sbjct: 324 PDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQL 383

Query: 100 FKELGSKGFLPDAVTYNSLLYAFAREGNVGRVK 2
           F +L S+GF PDAV+YNSLLYAFAREGNV +VK
Sbjct: 384 FNDLESRGFFPDAVSYNSLLYAFAREGNVEKVK 416



 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 1/199 (0%)
 Frame = -3

Query: 613 RQWYSPNARMLATILSVLGKANQEKLAVELFTRAEPG-VGDTVQVYNAMMGVYSRNGRFA 437
           R    P+     T++S   +A+  + A ++F   E       +  YNAM+ VY R G   
Sbjct: 319 RSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSG 378

Query: 436 KVQELLELMKSRGCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNT 257
           K ++L   ++SRG  PD VS+N+L+ A A+   +      ++  E+ K G   D +TYNT
Sbjct: 379 KAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEK--VKEIWEEMVKIGFGKDEMTYNT 436

Query: 256 LISACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKELGSKG 77
           +I    +    + A+++Y D+++S   PD  TY  ++   G+  K  EA  +  E+ + G
Sbjct: 437 MIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTG 496

Query: 76  FLPDAVTYNSLLYAFAREG 20
             P   TY++L+  +A+ G
Sbjct: 497 VKPTLKTYSALICGYAKAG 515



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
 Frame = -3

Query: 574 ILSVLGKANQEKLAVELFTRAEP-GVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSRG 398
           ++SV G+      A +LF   E  G       YN+++  ++R G   KV+E+ E M   G
Sbjct: 367 MISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIG 426

Query: 397 CEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLKE 218
              D +++NT+I+   K       +A++L  +++ SG  PD +TY  LI +  + + + E
Sbjct: 427 FGKDEMTYNTMIHMYGKQGQ--NELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAE 484

Query: 217 AVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLL 41
           A  + +++  +  +P L TY+A++  Y + GK  EAE  F  +   G  PD + Y+ +L
Sbjct: 485 AAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVML 543



 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 44/163 (26%), Positives = 83/163 (50%)
 Frame = -3

Query: 505  GVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSDTLLPG 326
            G   T+ +Y  M  + SR  +   V+ +L  M+  G +PDL  +N+++      +     
Sbjct: 913  GYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRK- 971

Query: 325  VAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAML 146
              I++   +++ GL PD  TYNTLI    R    +E   + +++  +  +P L TY +++
Sbjct: 972  -TIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLV 1030

Query: 145  SVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLLYAFAREGN 17
            + +G+     +AE LF+EL SKG   D   Y++++  +   G+
Sbjct: 1031 ASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGS 1073



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
 Frame = -3

Query: 637  ELYEWLNLRQWYSPNARMLATILSVLGKANQEKLAVELFTRAEPGVGDTVQVYNAMMGVY 458
            +L+  L  R ++       + + +   + N EK+        + G G     YN M+ +Y
Sbjct: 382  QLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMY 441

Query: 457  SRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRP 278
             + G+     +L   M+S G  PD V++  LI++  K++ +     +  ++E+  +G++P
Sbjct: 442  GKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGV--MSEMLNTGVKP 499

Query: 277  DIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLF 98
             + TY+ LI   ++     EA + ++ +  S  +PD   Y+ ML ++ R  +   A  L+
Sbjct: 500  TLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLY 559

Query: 97   KELGSKGFLPDAVTYNSLLYAFAREG---NVGRV 5
            KE+   G   D   Y  +L    +     ++GRV
Sbjct: 560  KEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRV 593



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 51/236 (21%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
 Frame = -3

Query: 604  YSPNARMLATILSVLGKANQEK-LAVELFTRAEPGVGDTVQVYNAMMGVYSRNGRFAKVQ 428
            Y P   +   +  +L +  Q + +   L    E G    + ++N+++ +Y     F K  
Sbjct: 914  YFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTI 973

Query: 427  ELLELMKSRGCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLIS 248
            ++ + +K  G EPD  ++NTLI    +     P     L++E+R +GL P + TY +L++
Sbjct: 974  QVYQRIKEDGLEPDEDTYNTLIVMYCRDHR--PEEGFSLMHEMRVAGLEPKLDTYKSLVA 1031

Query: 247  ACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAMLSVY----------------------- 137
            +  +   +++A +++ +L++  C+ D   Y+ M+ +Y                       
Sbjct: 1032 SFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEP 1091

Query: 136  ------------GRCGKATEAERLFKELGSKGFLPDAVTYNSLLYAFAREG--NVG 11
                        G  G+  EAE++   L   G     + Y+S++ A+ R G  N+G
Sbjct: 1092 TIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIG 1147



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 33/166 (19%), Positives = 80/166 (48%)
 Frame = -3

Query: 520  TRAEPGVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSD 341
            T    G   TV   N ++     +GR  ++  +++ ++  G +    S   +++A A++ 
Sbjct: 838  TMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAG 897

Query: 340  TLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWT 161
             +      K+ + ++ +G  P +  Y  +    SRG  +++   + +++E +  +PDL  
Sbjct: 898  NIFE--VKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSI 955

Query: 160  YNAMLSVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLLYAFARE 23
            +N++L +Y       +  ++++ +   G  PD  TYN+L+  + R+
Sbjct: 956  WNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRD 1001



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 36/164 (21%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
 Frame = -3

Query: 577 TILSVLGKANQEKLAVELFTRAEP-GVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSR 401
           T++ + GK  Q +LA++L+   +  G       Y  ++    +  + A+   ++  M + 
Sbjct: 436 TMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNT 495

Query: 400 GCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLK 221
           G +P L +++ LI   AK+    P  A +  + + +SG+RPD + Y+ ++    R ++ K
Sbjct: 496 GVKPTLKTYSALICGYAKAGK--PVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPK 553

Query: 220 EAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKEL 89
            A+ +Y ++       D   Y  ML    +  K  +  R+ +++
Sbjct: 554 RAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDM 597


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score =  338 bits (866), Expect = 7e-91
 Identities = 165/213 (77%), Positives = 190/213 (89%)
 Frame = -3

Query: 640 LELYEWLNLRQWYSPNARMLATILSVLGKANQEKLAVELFTRAEPGVGDTVQVYNAMMGV 461
           LE++EWLNLR WYSPNARMLATIL+VLGKANQE LAVE+F RAE  V +TVQVYNAMMGV
Sbjct: 160 LEVFEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFIRAESTVDNTVQVYNAMMGV 219

Query: 460 YSRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLR 281
           Y+R GRF KVQ +L+LM+ RGCEPDLVSFNTLINAR K+  + P VAI+LLNEVR+SGLR
Sbjct: 220 YARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLR 279

Query: 280 PDIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERL 101
           PDIITYNTLISACSR S+L+EAVK+++D+EA  CQPDLWTYNAM+SVYGRCG + +AE+L
Sbjct: 280 PDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQL 339

Query: 100 FKELGSKGFLPDAVTYNSLLYAFAREGNVGRVK 2
           FKEL SKG+ PDAVTYNSLLYAFAREGNV +VK
Sbjct: 340 FKELESKGYFPDAVTYNSLLYAFAREGNVDKVK 372



 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 1/184 (0%)
 Frame = -3

Query: 574 ILSVLGKANQEKLAVELFTRAEP-GVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSRG 398
           ++SV G+      A +LF   E  G       YN+++  ++R G   KV+E+   M   G
Sbjct: 323 MISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMG 382

Query: 397 CEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLKE 218
              D +++NT+I+   K      G+A++L  +++ SG  PD ITY  LI +  + + + E
Sbjct: 383 FIRDEMTYNTIIHMYGKQGQ--HGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVE 440

Query: 217 AVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLLY 38
           A  + +++     +P L TY+A++  Y R G+  EAE  F  +   G  PD + Y+ +L 
Sbjct: 441 AANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLD 500

Query: 37  AFAR 26
            F R
Sbjct: 501 VFLR 504



 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
 Frame = -3

Query: 604 YSPNARMLATILSVLGK-ANQEKLAVELFTRAEPGVGDTVQVYNAMMGVYSRNGRFAKVQ 428
           Y P+A    ++L    +  N +K+        + G       YN ++ +Y + G+     
Sbjct: 348 YFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLAL 407

Query: 427 ELLELMKSRGCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLIS 248
           +L   MK  G  PD +++  LI++  K++ ++   A  +++E+   G++P + TY+ LI 
Sbjct: 408 QLYRDMKLSGRTPDAITYTVLIDSLGKANKMVE--AANVMSEMLNIGVKPTLRTYSALIC 465

Query: 247 ACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKELGSKGFLP 68
             +R     EA + ++ +  S  +PD   Y+ ML V+ R  +AT+A  L++E+   G  P
Sbjct: 466 GYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITP 525

Query: 67  DAVTYNSLLYAFAREGNV 14
           D   Y ++L    RE  V
Sbjct: 526 DPTVYGAMLRNLGRENKV 543



 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 44/163 (26%), Positives = 82/163 (50%)
 Frame = -3

Query: 505  GVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSDTLLPG 326
            G   T+ +Y  M+G+  +  R   V+ ++  M+  G  PDL  +N+++      D     
Sbjct: 870  GYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRK- 928

Query: 325  VAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWTYNAML 146
              +++   +++ GL+PD  TYNTLI    R    +E   + +++     +P L TY +++
Sbjct: 929  -TVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLI 987

Query: 145  SVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLLYAFAREGN 17
            + +G+     +AE LF+EL SKG   D   Y+ ++  +   GN
Sbjct: 988  AAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGN 1030



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 36/229 (15%)
 Frame = -3

Query: 604  YSPNARMLATILSVLGKANQEKLAVELFTRAEP-GVGDTVQVYNAMMGVYSRNGRFAKVQ 428
            Y P   +   ++ +L K  + +    + T  E  G    + ++N+M+ +Y+    F K  
Sbjct: 871  YFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTV 930

Query: 427  ELLELMKSRGCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLIS 248
            ++ + +K  G +PD  ++NTLI    +     P     L++E+R+ GL P + TY +LI+
Sbjct: 931  QIYQRIKEDGLQPDEDTYNTLIVMYCRDHR--PEEGCSLMHEMRRIGLEPKLDTYKSLIA 988

Query: 247  A-----------------CSRGSDLKEA-----VKIYND-------------LEASSCQP 173
            A                  S+GS L  +     +KIY +             ++ +  +P
Sbjct: 989  AFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEP 1048

Query: 172  DLWTYNAMLSVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLLYAFAR 26
             + T + ++  YG  G+  EAE++   L   G     + Y+S++ A+ +
Sbjct: 1049 TIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLK 1097



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
 Frame = -3

Query: 577 TILSVLGKANQEKLAVELFTRAE-PGVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSR 401
           TI+ + GK  Q  LA++L+   +  G       Y  ++    +  +  +   ++  M + 
Sbjct: 392 TIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNI 451

Query: 400 GCEPDLVSFNTLINARAKSDTLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLK 221
           G +P L +++ LI   A++   L   A +  + +R+SG+RPD + Y+ ++    R  +  
Sbjct: 452 GVKPTLRTYSALICGYARAGQRLE--AEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEAT 509

Query: 220 EAVKIYNDLEASSCQPDLWTYNAMLSVYGRCGKATEAERLFKELGSK-GFLPDAV 59
           +A+ +Y ++      PD   Y AML   GR  K  + +R+ +++    G  P A+
Sbjct: 510 KAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGMNPQAI 564



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/166 (20%), Positives = 77/166 (46%)
 Frame = -3

Query: 520  TRAEPGVGDTVQVYNAMMGVYSRNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSD 341
            T    G   TV   N ++     +GR  ++  + + ++  G +    S   +++A A+  
Sbjct: 795  TMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVS 854

Query: 340  TLLPGVAIKLLNEVRKSGLRPDIITYNTLISACSRGSDLKEAVKIYNDLEASSCQPDLWT 161
             +    A K+   ++ +G  P +  Y  +I    +G  +++   +  ++E +  +PDL  
Sbjct: 855  NIAE--AKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSI 912

Query: 160  YNAMLSVYGRCGKATEAERLFKELGSKGFLPDAVTYNSLLYAFARE 23
            +N+ML +Y       +  ++++ +   G  PD  TYN+L+  + R+
Sbjct: 913  WNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRD 958