BLASTX nr result
ID: Coptis21_contig00030862
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030862 (326 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|2... 137 1e-30 ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containi... 135 3e-30 emb|CBI30210.3| unnamed protein product [Vitis vinifera] 135 3e-30 ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29 ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29 >ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa] Length = 915 Score = 137 bits (344), Expect = 1e-30 Identities = 61/108 (56%), Positives = 87/108 (80%) Frame = +3 Query: 3 KCGSVDDVVSIFERMPEKDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSG 182 +CGS++ V ++FERMP +D+ITWT M+ A+M+FG+V+ A+ F +MP K+ +SYNALL+G Sbjct: 352 RCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTG 411 Query: 183 FCHNGEGLQALKLFRGMLERGMELSDFTLTSIVNACALLSQVEISKQI 326 FC N EGL+AL LF M++ G EL+DFTLT ++NAC LL ++EIS+QI Sbjct: 412 FCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQI 459 >ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like [Vitis vinifera] Length = 882 Score = 135 bits (341), Expect = 3e-30 Identities = 62/108 (57%), Positives = 85/108 (78%) Frame = +3 Query: 3 KCGSVDDVVSIFERMPEKDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSG 182 KCGS+ VV++FE+M +DVITWT M+ A+M+FG+ + AL+ F +MP ++ ISYNA+LSG Sbjct: 319 KCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSG 378 Query: 183 FCHNGEGLQALKLFRGMLERGMELSDFTLTSIVNACALLSQVEISKQI 326 FC NGEG +AL F M+E G+EL+DFTLT ++NAC LL + +ISKQI Sbjct: 379 FCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQI 426 Score = 65.5 bits (158), Expect = 4e-09 Identities = 29/91 (31%), Positives = 55/91 (60%) Frame = +3 Query: 54 KDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEGLQALKLFRGM 233 +D+ +++A++K GMV +A K FV + + +SY A++SGF + QA+++F M Sbjct: 103 EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRM 162 Query: 234 LERGMELSDFTLTSIVNACALLSQVEISKQI 326 G+EL++F+ +I+ C L +E+ Q+ Sbjct: 163 RSSGIELNEFSFVAILTVCIRLLDLELGCQL 193 >emb|CBI30210.3| unnamed protein product [Vitis vinifera] Length = 900 Score = 135 bits (341), Expect = 3e-30 Identities = 62/108 (57%), Positives = 85/108 (78%) Frame = +3 Query: 3 KCGSVDDVVSIFERMPEKDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSG 182 KCGS+ VV++FE+M +DVITWT M+ A+M+FG+ + AL+ F +MP ++ ISYNA+LSG Sbjct: 337 KCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSG 396 Query: 183 FCHNGEGLQALKLFRGMLERGMELSDFTLTSIVNACALLSQVEISKQI 326 FC NGEG +AL F M+E G+EL+DFTLT ++NAC LL + +ISKQI Sbjct: 397 FCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQI 444 Score = 65.5 bits (158), Expect = 4e-09 Identities = 29/91 (31%), Positives = 55/91 (60%) Frame = +3 Query: 54 KDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEGLQALKLFRGM 233 +D+ +++A++K GMV +A K FV + + +SY A++SGF + QA+++F M Sbjct: 121 EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRM 180 Query: 234 LERGMELSDFTLTSIVNACALLSQVEISKQI 326 G+EL++F+ +I+ C L +E+ Q+ Sbjct: 181 RSSGIELNEFSFVAILTVCIRLLDLELGCQL 211 >ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like [Cucumis sativus] Length = 908 Score = 133 bits (334), Expect = 2e-29 Identities = 60/108 (55%), Positives = 85/108 (78%) Frame = +3 Query: 3 KCGSVDDVVSIFERMPEKDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSG 182 KCGS +DV +FE MP +DVITWTGM+ ++M+FGM++SA++ F +MP ++CISYNA+L+G Sbjct: 345 KCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAG 404 Query: 183 FCHNGEGLQALKLFRGMLERGMELSDFTLTSIVNACALLSQVEISKQI 326 N +G +AL+LF MLE G+E+SD TLTSI+ AC LL ++S+QI Sbjct: 405 LSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQI 452 Score = 60.1 bits (144), Expect = 2e-07 Identities = 28/92 (30%), Positives = 53/92 (57%) Frame = +3 Query: 51 EKDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEGLQALKLFRG 230 E+D+ ++ A++K G+V A K F + + +SY AL+SGF + +A++LF Sbjct: 127 EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFA 186 Query: 231 MLERGMELSDFTLTSIVNACALLSQVEISKQI 326 ML+ G+E +++T +I+ AC ++ Q+ Sbjct: 187 MLDSGIEPNEYTFVAILTACIRNMDYQLGSQV 218 >ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like [Cucumis sativus] Length = 908 Score = 133 bits (334), Expect = 2e-29 Identities = 60/108 (55%), Positives = 85/108 (78%) Frame = +3 Query: 3 KCGSVDDVVSIFERMPEKDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSG 182 KCGS +DV +FE MP +DVITWTGM+ ++M+FGM++SA++ F +MP ++CISYNA+L+G Sbjct: 345 KCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAG 404 Query: 183 FCHNGEGLQALKLFRGMLERGMELSDFTLTSIVNACALLSQVEISKQI 326 N +G +AL+LF MLE G+E+SD TLTSI+ AC LL ++S+QI Sbjct: 405 LSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQI 452 Score = 60.1 bits (144), Expect = 2e-07 Identities = 28/92 (30%), Positives = 53/92 (57%) Frame = +3 Query: 51 EKDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEGLQALKLFRG 230 E+D+ ++ A++K G+V A K F + + +SY AL+SGF + +A++LF Sbjct: 127 EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFA 186 Query: 231 MLERGMELSDFTLTSIVNACALLSQVEISKQI 326 ML+ G+E +++T +I+ AC ++ Q+ Sbjct: 187 MLDSGIEPNEYTFVAILTACIRNMDYQLGSQV 218