BLASTX nr result

ID: Coptis21_contig00030861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030861
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329654.1| AP2 domain-containing transcription factor [...   112   4e-23
gb|ABK93482.1| unknown [Populus trichocarpa]                          112   4e-23
ref|XP_002268683.1| PREDICTED: AP2-like ethylene-responsive tran...   110   2e-22
gb|AAV98627.1| AP2 protein [Elaeis guineensis]                        105   4e-21
ref|XP_002866203.1| AP2/EREBP transcription factor [Arabidopsis ...   103   2e-20

>ref|XP_002329654.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222870535|gb|EEF07666.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 542

 Score =  112 bits (280), Expect = 4e-23
 Identities = 69/157 (43%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
 Frame = +3

Query: 99  VTTGNPLDLSMFSV-GPKLEDFLXXXXXXXXXXXXXXXXXSLGMGRFSSEH--------- 248
           V  G   D+S+F+  GPKLEDFL                     G+FS+E          
Sbjct: 55  VAAGRATDISLFTASGPKLEDFLGGCTSTSPSQTPQQQPLC---GQFSTETPVTTTATAL 111

Query: 249 HSNNNTGVYESELKTIAASFLRGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSKKA 428
             + ++ +Y+SELKTIAASFLRG+                               + KK 
Sbjct: 112 SDSTSSEIYDSELKTIAASFLRGFASTDHQKIDSTQKHQQLLVQAEH--------APKKT 163

Query: 429 LETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ 539
           +ETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ
Sbjct: 164 VETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ 200


>gb|ABK93482.1| unknown [Populus trichocarpa]
          Length = 545

 Score =  112 bits (280), Expect = 4e-23
 Identities = 69/157 (43%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
 Frame = +3

Query: 99  VTTGNPLDLSMFSV-GPKLEDFLXXXXXXXXXXXXXXXXXSLGMGRFSSEH--------- 248
           V  G   D+S+F+  GPKLEDFL                     G+FS+E          
Sbjct: 55  VAAGRATDISLFTASGPKLEDFLGGCTSTSPSQTPQQQPLC---GQFSTETPVTTTATTL 111

Query: 249 HSNNNTGVYESELKTIAASFLRGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSKKA 428
             + ++ +Y+SELKTIAASFLRG+                               + KK 
Sbjct: 112 SDSTSSEIYDSELKTIAASFLRGFASTDHQKIDSTQKHQQLLVQAEH--------APKKT 163

Query: 429 LETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ 539
           +ETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ
Sbjct: 164 VETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ 200


>ref|XP_002268683.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           AIL5-like [Vitis vinifera]
          Length = 501

 Score =  110 bits (274), Expect = 2e-22
 Identities = 64/134 (47%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
 Frame = +3

Query: 141 GPKLEDFLXXXXXXXXXXXXXXXXXSLGMGRFSSEHHSN-NNTGVYESELKTIAASFLRG 317
           GPKLEDFL                   G+ +FS++  +  ++  +YESELKTIAASFLRG
Sbjct: 57  GPKLEDFLGGGGGGGGA--------GAGLDQFSAKTPAGLSDAEIYESELKTIAASFLRG 108

Query: 318 YXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSKKALETFGQRTSIYRGVTRHRWTGRY 497
           +                               S KK+++TFGQRTSIYRGVTRHRWTGRY
Sbjct: 109 FSSEQSEAQKQLALTPEP--------------SPKKSVDTFGQRTSIYRGVTRHRWTGRY 154

Query: 498 EAHLWDNSCRREGQ 539
           EAHLWDNSCRREGQ
Sbjct: 155 EAHLWDNSCRREGQ 168


>gb|AAV98627.1| AP2 protein [Elaeis guineensis]
          Length = 478

 Score =  105 bits (262), Expect = 4e-21
 Identities = 63/138 (45%), Positives = 74/138 (53%)
 Frame = +3

Query: 126 SMFSVGPKLEDFLXXXXXXXXXXXXXXXXXSLGMGRFSSEHHSNNNTGVYESELKTIAAS 305
           +M  VGPKLEDFL                    MGR++    + +  G+Y+SELK IAA 
Sbjct: 49  AMAVVGPKLEDFLGGCGEP--------------MGRYAGGE-TGDAGGIYDSELKHIAAG 93

Query: 306 FLRGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSKKALETFGQRTSIYRGVTRHRW 485
           +L+G                                 S+KA+ETFGQRTSIYRGVTRHRW
Sbjct: 94  YLQGLPATEQQDSEMAKVAAPA--------------ESRKAVETFGQRTSIYRGVTRHRW 139

Query: 486 TGRYEAHLWDNSCRREGQ 539
           TGRYEAHLWDNSCRREGQ
Sbjct: 140 TGRYEAHLWDNSCRREGQ 157


>ref|XP_002866203.1| AP2/EREBP transcription factor [Arabidopsis lyrata subsp. lyrata]
           gi|297312038|gb|EFH42462.1| AP2/EREBP transcription
           factor [Arabidopsis lyrata subsp. lyrata]
          Length = 548

 Score =  103 bits (256), Expect = 2e-20
 Identities = 68/152 (44%), Positives = 81/152 (53%), Gaps = 5/152 (3%)
 Frame = +3

Query: 99  VTTGNPLD-LSMFSVGPKLEDFLXXXXXXXXXXXXXXXXXSLGMGRFSSEH----HSNNN 263
           V+TG+    LS++  GPKLE+FL                 SLG   FSS+     H  + 
Sbjct: 83  VSTGDATAVLSIYPGGPKLENFLGGGATTTTTRSMQQVQ-SLGGVVFSSDLQPPLHPPSA 141

Query: 264 TGVYESELKTIAASFLRGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSKKALETFG 443
             +Y+SELK+IAASFL  Y                               + KK +E+FG
Sbjct: 142 AEIYDSELKSIAASFLGNYSGGHSSEVSSVHKQQQNPLAVSEASP-----TPKKNVESFG 196

Query: 444 QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ 539
           QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ
Sbjct: 197 QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ 228


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