BLASTX nr result
ID: Coptis21_contig00030861
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030861 (540 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002329654.1| AP2 domain-containing transcription factor [... 112 4e-23 gb|ABK93482.1| unknown [Populus trichocarpa] 112 4e-23 ref|XP_002268683.1| PREDICTED: AP2-like ethylene-responsive tran... 110 2e-22 gb|AAV98627.1| AP2 protein [Elaeis guineensis] 105 4e-21 ref|XP_002866203.1| AP2/EREBP transcription factor [Arabidopsis ... 103 2e-20 >ref|XP_002329654.1| AP2 domain-containing transcription factor [Populus trichocarpa] gi|222870535|gb|EEF07666.1| AP2 domain-containing transcription factor [Populus trichocarpa] Length = 542 Score = 112 bits (280), Expect = 4e-23 Identities = 69/157 (43%), Positives = 82/157 (52%), Gaps = 10/157 (6%) Frame = +3 Query: 99 VTTGNPLDLSMFSV-GPKLEDFLXXXXXXXXXXXXXXXXXSLGMGRFSSEH--------- 248 V G D+S+F+ GPKLEDFL G+FS+E Sbjct: 55 VAAGRATDISLFTASGPKLEDFLGGCTSTSPSQTPQQQPLC---GQFSTETPVTTTATAL 111 Query: 249 HSNNNTGVYESELKTIAASFLRGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSKKA 428 + ++ +Y+SELKTIAASFLRG+ + KK Sbjct: 112 SDSTSSEIYDSELKTIAASFLRGFASTDHQKIDSTQKHQQLLVQAEH--------APKKT 163 Query: 429 LETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ 539 +ETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ Sbjct: 164 VETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ 200 >gb|ABK93482.1| unknown [Populus trichocarpa] Length = 545 Score = 112 bits (280), Expect = 4e-23 Identities = 69/157 (43%), Positives = 82/157 (52%), Gaps = 10/157 (6%) Frame = +3 Query: 99 VTTGNPLDLSMFSV-GPKLEDFLXXXXXXXXXXXXXXXXXSLGMGRFSSEH--------- 248 V G D+S+F+ GPKLEDFL G+FS+E Sbjct: 55 VAAGRATDISLFTASGPKLEDFLGGCTSTSPSQTPQQQPLC---GQFSTETPVTTTATTL 111 Query: 249 HSNNNTGVYESELKTIAASFLRGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSKKA 428 + ++ +Y+SELKTIAASFLRG+ + KK Sbjct: 112 SDSTSSEIYDSELKTIAASFLRGFASTDHQKIDSTQKHQQLLVQAEH--------APKKT 163 Query: 429 LETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ 539 +ETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ Sbjct: 164 VETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ 200 >ref|XP_002268683.1| PREDICTED: AP2-like ethylene-responsive transcription factor AIL5-like [Vitis vinifera] Length = 501 Score = 110 bits (274), Expect = 2e-22 Identities = 64/134 (47%), Positives = 76/134 (56%), Gaps = 1/134 (0%) Frame = +3 Query: 141 GPKLEDFLXXXXXXXXXXXXXXXXXSLGMGRFSSEHHSN-NNTGVYESELKTIAASFLRG 317 GPKLEDFL G+ +FS++ + ++ +YESELKTIAASFLRG Sbjct: 57 GPKLEDFLGGGGGGGGA--------GAGLDQFSAKTPAGLSDAEIYESELKTIAASFLRG 108 Query: 318 YXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSKKALETFGQRTSIYRGVTRHRWTGRY 497 + S KK+++TFGQRTSIYRGVTRHRWTGRY Sbjct: 109 FSSEQSEAQKQLALTPEP--------------SPKKSVDTFGQRTSIYRGVTRHRWTGRY 154 Query: 498 EAHLWDNSCRREGQ 539 EAHLWDNSCRREGQ Sbjct: 155 EAHLWDNSCRREGQ 168 >gb|AAV98627.1| AP2 protein [Elaeis guineensis] Length = 478 Score = 105 bits (262), Expect = 4e-21 Identities = 63/138 (45%), Positives = 74/138 (53%) Frame = +3 Query: 126 SMFSVGPKLEDFLXXXXXXXXXXXXXXXXXSLGMGRFSSEHHSNNNTGVYESELKTIAAS 305 +M VGPKLEDFL MGR++ + + G+Y+SELK IAA Sbjct: 49 AMAVVGPKLEDFLGGCGEP--------------MGRYAGGE-TGDAGGIYDSELKHIAAG 93 Query: 306 FLRGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSKKALETFGQRTSIYRGVTRHRW 485 +L+G S+KA+ETFGQRTSIYRGVTRHRW Sbjct: 94 YLQGLPATEQQDSEMAKVAAPA--------------ESRKAVETFGQRTSIYRGVTRHRW 139 Query: 486 TGRYEAHLWDNSCRREGQ 539 TGRYEAHLWDNSCRREGQ Sbjct: 140 TGRYEAHLWDNSCRREGQ 157 >ref|XP_002866203.1| AP2/EREBP transcription factor [Arabidopsis lyrata subsp. lyrata] gi|297312038|gb|EFH42462.1| AP2/EREBP transcription factor [Arabidopsis lyrata subsp. lyrata] Length = 548 Score = 103 bits (256), Expect = 2e-20 Identities = 68/152 (44%), Positives = 81/152 (53%), Gaps = 5/152 (3%) Frame = +3 Query: 99 VTTGNPLD-LSMFSVGPKLEDFLXXXXXXXXXXXXXXXXXSLGMGRFSSEH----HSNNN 263 V+TG+ LS++ GPKLE+FL SLG FSS+ H + Sbjct: 83 VSTGDATAVLSIYPGGPKLENFLGGGATTTTTRSMQQVQ-SLGGVVFSSDLQPPLHPPSA 141 Query: 264 TGVYESELKTIAASFLRGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSKKALETFG 443 +Y+SELK+IAASFL Y + KK +E+FG Sbjct: 142 AEIYDSELKSIAASFLGNYSGGHSSEVSSVHKQQQNPLAVSEASP-----TPKKNVESFG 196 Query: 444 QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ 539 QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ Sbjct: 197 QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQ 228