BLASTX nr result

ID: Coptis21_contig00030859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030859
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530319.1| conserved hypothetical protein [Ricinus comm...   116   3e-24
ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865...   112   3e-23
ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Popu...   107   1e-21
ref|XP_004149222.1| PREDICTED: uncharacterized protein At5g39865...   102   5e-20
ref|NP_001241249.1| uncharacterized protein LOC100781497 [Glycin...   100   2e-19

>ref|XP_002530319.1| conserved hypothetical protein [Ricinus communis]
           gi|223530123|gb|EEF32035.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score =  116 bits (290), Expect = 3e-24
 Identities = 61/116 (52%), Positives = 83/116 (71%), Gaps = 7/116 (6%)
 Frame = +2

Query: 206 SLKTSSNAEEYEKRCPPGGENSVIFYT----GMGGNSRDSYDIRSILQSHQIQMFERDIV 373
           SL+  S  + +E++CPPGGEN+V+ YT    G+     D   +RSI++SH I M ERDI 
Sbjct: 262 SLQLESILQSFEQKCPPGGENAVVLYTTTLRGIRKTFEDCNTVRSIIESHHIHMLERDIS 321

Query: 374 L-SGYRKELWEIMGN--TNVPVLFVKGRLIGGAEKVTELEKEGKLGILFDGIPKEL 532
           + SG ++EL  +MG     VP++FVKGRLIGGA++V +LE+EGKLGILFDGIP+ L
Sbjct: 322 MDSGLKEELRRLMGTKVVKVPLVFVKGRLIGGADQVVKLEEEGKLGILFDGIPRGL 377


>ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
          Length = 398

 Score =  112 bits (281), Expect = 3e-23
 Identities = 67/137 (48%), Positives = 87/137 (63%), Gaps = 17/137 (12%)
 Frame = +2

Query: 173 EMNEHFKK------KYVSLKTSSNAEE----YEKRCPPGGENSVIFYT----GMGGNSRD 310
           E  E  KK      K   L+ S + E     +EK+CPPGG N+V+ YT    G+     D
Sbjct: 213 EEKEQIKKIVSPIPKVQKLRNSRDCESILDLFEKKCPPGGANAVVIYTTTLRGIRKTFED 272

Query: 311 SYDIRSILQSHQIQMFERDIVL-SGYRKELWEIMGN--TNVPVLFVKGRLIGGAEKVTEL 481
              +RSIL+SH I MFERDI + SG ++EL  +MG     VP++FVKGRLIGGA++V +L
Sbjct: 273 CNHVRSILESHHIHMFERDISMDSGLKEELRGLMGTKEVKVPLVFVKGRLIGGADEVVKL 332

Query: 482 EKEGKLGILFDGIPKEL 532
           E+EGKL ILFDGIP+ L
Sbjct: 333 EEEGKLDILFDGIPRAL 349


>ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Populus trichocarpa]
           gi|222855402|gb|EEE92949.1| hypothetical protein
           POPTRDRAFT_561500 [Populus trichocarpa]
          Length = 407

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 7/108 (6%)
 Frame = +2

Query: 230 EEYEKRCPPGGENSVIFYT----GMGGNSRDSYDIRSILQSHQIQMFERDIVL-SGYRKE 394
           + +E++CPPGGEN V+ YT    G+     D    RSI++SH I + ERD+ + SG+++E
Sbjct: 250 QSFEQKCPPGGENKVVIYTTTLRGIRKTFEDCNTARSIIESHHIHIVERDVSMDSGFKEE 309

Query: 395 LWEIMGN--TNVPVLFVKGRLIGGAEKVTELEKEGKLGILFDGIPKEL 532
           L  +MG     VP++FVKGRLIGGA++V +LE+EGKL ILFDGIP+ L
Sbjct: 310 LRRLMGTKEVKVPLVFVKGRLIGGADQVVKLEEEGKLEILFDGIPRGL 357


>ref|XP_004149222.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
           gi|449522666|ref|XP_004168347.1| PREDICTED:
           uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 397

 Score =  102 bits (254), Expect = 5e-20
 Identities = 55/120 (45%), Positives = 82/120 (68%), Gaps = 7/120 (5%)
 Frame = +2

Query: 185 HFKKKYVSLKTSSNAEEYEKRCPPGGENSVIFYT----GMGGNSRDSYDIRSILQSHQIQ 352
           HF++   +LK      ++E+ CPPGGE SV+ YT    G+     D   +RSI++S+ I 
Sbjct: 231 HFQESETALK------KFEELCPPGGETSVVIYTTTLRGIRKTFEDCNKVRSIVESYGIH 284

Query: 353 MFERDIVL-SGYRKELWEIMGN--TNVPVLFVKGRLIGGAEKVTELEKEGKLGILFDGIP 523
           + ERD+ + SG+++EL  +MG+    VP +FVKGRLIGGA +V ++E+EGKLG+LF+GIP
Sbjct: 285 VVERDVSMDSGFKEELRALMGSKEVKVPAVFVKGRLIGGAAEVLKMEEEGKLGVLFEGIP 344


>ref|NP_001241249.1| uncharacterized protein LOC100781497 [Glycine max]
           gi|255637067|gb|ACU18865.1| unknown [Glycine max]
          Length = 398

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/112 (44%), Positives = 81/112 (72%), Gaps = 7/112 (6%)
 Frame = +2

Query: 209 LKTSSNAEEYEKRCPPGGENSVIFYTGMGGNSRDSYD----IRSILQSHQIQMFERDIVL 376
           L + +  + +E++ PPGGEN V+ YT      R +++    +RSI++S+ + + ERD+ +
Sbjct: 233 LDSQTFIKTFEEKLPPGGENCVVIYTTTLRGIRKTFEECNKVRSIVESYCVHVVERDVSM 292

Query: 377 -SGYRKELWEIMGN--TNVPVLFVKGRLIGGAEKVTELEKEGKLGILFDGIP 523
            SG+++EL ++MG     VPV+FVKGRL+GGAE++ +LE+EGKLG+LF+GIP
Sbjct: 293 DSGFKEELRKLMGTKQVKVPVVFVKGRLVGGAEEIVKLEEEGKLGVLFEGIP 344


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