BLASTX nr result

ID: Coptis21_contig00030838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030838
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14936.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002511307.1| conserved hypothetical protein [Ricinus comm...    97   2e-18
ref|XP_002321637.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002277186.2| PREDICTED: uncharacterized protein LOC100248...    81   1e-13
gb|AFW87559.1| hypothetical protein ZEAMMB73_909705 [Zea mays]         73   3e-11

>emb|CBI14936.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/83 (57%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
 Frame = -1

Query: 302 KLARISSGEIKAKAKIILXXXXXXXXSMVAAICYAWLLDSRIRETEKEGD--GALVVPVM 129
           K+ +I +GEI AKAKI+L        SMVAAICYAWLL++R+R+++KE D    +VVPVM
Sbjct: 165 KIGKIVNGEISAKAKILLSGPSNSTSSMVAAICYAWLLENRMRDSKKEDDEEECVVVPVM 224

Query: 128 NMRRGRMWKQRQVAWLLHHVGID 60
           N+RRG MWK  + AWL HH+GID
Sbjct: 225 NVRRGNMWKLLRAAWLFHHIGID 247


>ref|XP_002511307.1| conserved hypothetical protein [Ricinus communis]
           gi|223550422|gb|EEF51909.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 648

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/83 (57%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
 Frame = -1

Query: 302 KLARISSGEIKAKAKIILXXXXXXXXSMVAAICYAWLLDSRIRETEKE--GDGALVVPVM 129
           K+ +I +GEI +KAK+IL        SMVAAICYAWLL++R  + + E  G+G +VVPVM
Sbjct: 344 KIEKILNGEIGSKAKVILSGPTNSTSSMVAAICYAWLLENRFMKIKGEDNGEGYVVVPVM 403

Query: 128 NMRRGRMWKQRQVAWLLHHVGID 60
           N+RRGRMWKQRQ AWL  +VG+D
Sbjct: 404 NVRRGRMWKQRQAAWLFQYVGLD 426


>ref|XP_002321637.1| predicted protein [Populus trichocarpa] gi|222868633|gb|EEF05764.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
 Frame = -1

Query: 302 KLARISSGEIKAKAKIILXXXXXXXXSMVAAICYAWLLDSRIRETEKEGD--GALVVPVM 129
           K+ +I + E+ +KAKIIL        SMVAAICYA LL +R+ + +   D  G +V PVM
Sbjct: 351 KIEKILNRELDSKAKIILSGPSNSTSSMVAAICYALLLANRMTKNKGNSDREGTVVFPVM 410

Query: 128 NMRRGRMWKQRQVAWLLHHVGID 60
           N RRGRMWKQRQ AWL  HVG+D
Sbjct: 411 NTRRGRMWKQRQAAWLFQHVGLD 433


>ref|XP_002277186.2| PREDICTED: uncharacterized protein LOC100248384 [Vitis vinifera]
          Length = 279

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/56 (64%), Positives = 46/56 (82%), Gaps = 2/56 (3%)
 Frame = -1

Query: 221 MVAAICYAWLLDSRIRETEKEGDG--ALVVPVMNMRRGRMWKQRQVAWLLHHVGID 60
           MVAAICYAWLL++R+R+++KE D    +VVPVMN+RRG MWK  + AWL HH+GID
Sbjct: 1   MVAAICYAWLLENRMRDSKKEDDEEECVVVPVMNVRRGNMWKLLRAAWLFHHIGID 56


>gb|AFW87559.1| hypothetical protein ZEAMMB73_909705 [Zea mays]
          Length = 97

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
 Frame = -1

Query: 299 LARISSGEIKAK--AKIILXXXXXXXXSMVAAICYAWLLDSRIRETEKEGDGALVVPVMN 126
           +A +++G+  A    K++L        S+VAAICYAW+L S+       GDG   VPV+N
Sbjct: 2   VADLAAGDRPASRSTKLVLSDPSKSLSSIVAAICYAWMLPSK-------GDGQATVPVVN 54

Query: 125 MRRGRMWKQRQVAWLLHHVGIDRSEEHTSELQSHLNLVC 9
           M R RM + RQ AWLL+HVG+D S    ++   H+ L+C
Sbjct: 55  MSRSRMARCRQAAWLLYHVGVDASALLFADEVHHVTLLC 93


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