BLASTX nr result

ID: Coptis21_contig00030835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030835
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514658.1| mitochondrial carrier protein, putative [Ric...   151   6e-35
emb|CBI15123.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_002280848.1| PREDICTED: mitochondrial substrate carrier f...   146   2e-33
ref|XP_002465647.1| hypothetical protein SORBIDRAFT_01g042940 [S...   138   4e-31
ref|NP_001148427.1| LOC100282042 [Zea mays] gi|195619208|gb|ACG3...   136   2e-30

>ref|XP_002514658.1| mitochondrial carrier protein, putative [Ricinus communis]
           gi|223546262|gb|EEF47764.1| mitochondrial carrier
           protein, putative [Ricinus communis]
          Length = 356

 Score =  151 bits (381), Expect = 6e-35
 Identities = 72/91 (79%), Positives = 80/91 (87%)
 Frame = +1

Query: 1   LTTPLDVIKTRLQVQGPTLRYNGWLNAITRIWMVEGAKGLFRGSVPRIIWYIPASALTFM 180
           LTTPLDVIKTRLQVQG T+RYNGWL+A+ RIW +EG KG+FRGS+PRI WYIPASALTFM
Sbjct: 265 LTTPLDVIKTRLQVQGSTIRYNGWLDAMKRIWKIEGVKGMFRGSIPRITWYIPASALTFM 324

Query: 181 AVEFLRDHFNGDIHEVANLSVEKKGSTLRKV 273
           AVEFLRD FN    EV NLSVEKKGS+LR+V
Sbjct: 325 AVEFLRDQFNEKNQEVTNLSVEKKGSSLREV 355


>emb|CBI15123.3| unnamed protein product [Vitis vinifera]
          Length = 327

 Score =  146 bits (369), Expect = 2e-33
 Identities = 70/96 (72%), Positives = 83/96 (86%), Gaps = 5/96 (5%)
 Frame = +1

Query: 1   LTTPLDVIKTRLQVQGPTLRYNGWLNAITRIWMVEGAKGLFRGSVPRIIWYIPASALTFM 180
           LTTPLDVIKTRLQVQG    YNGWL+AI RIWM EG KG+FRGS+PRI+WYIPASALTFM
Sbjct: 231 LTTPLDVIKTRLQVQGSNSSYNGWLDAIHRIWMTEGVKGMFRGSIPRIVWYIPASALTFM 290

Query: 181 AVEFLRDHFNGDIH-----EVANLSVEKKGSTLRKV 273
           AVEFLRDHFNG ++     EV++LS++KKGS+L++V
Sbjct: 291 AVEFLRDHFNGGLNNNSMQEVSSLSIDKKGSSLQEV 326


>ref|XP_002280848.1| PREDICTED: mitochondrial substrate carrier family protein X-like
           [Vitis vinifera]
          Length = 352

 Score =  146 bits (369), Expect = 2e-33
 Identities = 70/96 (72%), Positives = 83/96 (86%), Gaps = 5/96 (5%)
 Frame = +1

Query: 1   LTTPLDVIKTRLQVQGPTLRYNGWLNAITRIWMVEGAKGLFRGSVPRIIWYIPASALTFM 180
           LTTPLDVIKTRLQVQG    YNGWL+AI RIWM EG KG+FRGS+PRI+WYIPASALTFM
Sbjct: 256 LTTPLDVIKTRLQVQGSNSSYNGWLDAIHRIWMTEGVKGMFRGSIPRIVWYIPASALTFM 315

Query: 181 AVEFLRDHFNGDIH-----EVANLSVEKKGSTLRKV 273
           AVEFLRDHFNG ++     EV++LS++KKGS+L++V
Sbjct: 316 AVEFLRDHFNGGLNNNSMQEVSSLSIDKKGSSLQEV 351


>ref|XP_002465647.1| hypothetical protein SORBIDRAFT_01g042940 [Sorghum bicolor]
           gi|241919501|gb|EER92645.1| hypothetical protein
           SORBIDRAFT_01g042940 [Sorghum bicolor]
          Length = 368

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/88 (75%), Positives = 74/88 (84%), Gaps = 4/88 (4%)
 Frame = +1

Query: 1   LTTPLDVIKTRLQVQGPTLRYNGWLNAITRIWMVEGAKGLFRGSVPRIIWYIPASALTFM 180
           LTTPLDVIKTRLQVQGPT RYNGWL+AIT+ W  EG  GLF+GSVPRIIWYIPASA TFM
Sbjct: 274 LTTPLDVIKTRLQVQGPTSRYNGWLDAITKTWASEGVHGLFKGSVPRIIWYIPASAFTFM 333

Query: 181 AVEFLRDHFNG----DIHEVANLSVEKK 252
           AVEFLRDHFNG    D HE+ +LS++ +
Sbjct: 334 AVEFLRDHFNGKVDADAHELTSLSIDTR 361


>ref|NP_001148427.1| LOC100282042 [Zea mays] gi|195619208|gb|ACG31434.1| mitochondrial
           carrier YMR166C [Zea mays]
          Length = 366

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/88 (73%), Positives = 73/88 (82%), Gaps = 4/88 (4%)
 Frame = +1

Query: 1   LTTPLDVIKTRLQVQGPTLRYNGWLNAITRIWMVEGAKGLFRGSVPRIIWYIPASALTFM 180
           LTTPLDVIKTRLQVQG T RYNGWL+AIT+ W  EG +GLF+GSVPRIIWY+PASA TFM
Sbjct: 272 LTTPLDVIKTRLQVQGSTSRYNGWLDAITKTWTSEGVRGLFKGSVPRIIWYVPASAFTFM 331

Query: 181 AVEFLRDHFN----GDIHEVANLSVEKK 252
           AVEFLRDHFN     D HEV +LS++ K
Sbjct: 332 AVEFLRDHFNDKDDADAHEVTSLSIDTK 359


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