BLASTX nr result

ID: Coptis21_contig00030830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030830
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndr...   112   2e-23
ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent hel...   110   1e-22
emb|CBI15784.3| unnamed protein product [Vitis vinifera]              110   1e-22
ref|XP_002319444.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent hel...   106   2e-21

>ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
           helicase homolog [Glycine max]
          Length = 920

 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/76 (75%), Positives = 63/76 (82%)
 Frame = +3

Query: 3   EVKLYHMLLDMRLKLARIKGIAPYAICGDQTIQKIALCCPSTKARLANIDGVNQHLVTTY 182
           E +LY MLL+ RLKLAR  G APYAICGDQTI+KIAL  PSTKARLANIDGVNQHLVT Y
Sbjct: 548 EGQLYQMLLEERLKLARSVGTAPYAICGDQTIKKIALPRPSTKARLANIDGVNQHLVTKY 607

Query: 183 GDHILQNVRDFSEGLN 230
           GDH LQ ++  S+GLN
Sbjct: 608 GDHFLQVIQKLSQGLN 623


>ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis
           vinifera]
          Length = 913

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/76 (69%), Positives = 63/76 (82%)
 Frame = +3

Query: 3   EVKLYHMLLDMRLKLARIKGIAPYAICGDQTIQKIALCCPSTKARLANIDGVNQHLVTTY 182
           E +LYHMLLD R+K AR  G APYAICG++TI+KIAL  PSTKARLANIDGVNQH +TTY
Sbjct: 545 EGQLYHMLLDERMKFARGIGTAPYAICGNETIKKIALIRPSTKARLANIDGVNQHFLTTY 604

Query: 183 GDHILQNVRDFSEGLN 230
           GDH LQ+++  S+ LN
Sbjct: 605 GDHFLQSIQHLSQALN 620


>emb|CBI15784.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/76 (69%), Positives = 63/76 (82%)
 Frame = +3

Query: 3   EVKLYHMLLDMRLKLARIKGIAPYAICGDQTIQKIALCCPSTKARLANIDGVNQHLVTTY 182
           E +LYHMLLD R+K AR  G APYAICG++TI+KIAL  PSTKARLANIDGVNQH +TTY
Sbjct: 620 EGQLYHMLLDERMKFARGIGTAPYAICGNETIKKIALIRPSTKARLANIDGVNQHFLTTY 679

Query: 183 GDHILQNVRDFSEGLN 230
           GDH LQ+++  S+ LN
Sbjct: 680 GDHFLQSIQHLSQALN 695


>ref|XP_002319444.1| predicted protein [Populus trichocarpa] gi|222857820|gb|EEE95367.1|
           predicted protein [Populus trichocarpa]
          Length = 854

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/76 (68%), Positives = 63/76 (82%)
 Frame = +3

Query: 3   EVKLYHMLLDMRLKLARIKGIAPYAICGDQTIQKIALCCPSTKARLANIDGVNQHLVTTY 182
           E +++HMLLD R KLA+  G APYA+CGDQTI+KIAL  PSTKARLANIDGVNQHLV  +
Sbjct: 512 EARIFHMLLDERTKLAKSIGTAPYAVCGDQTIKKIALVRPSTKARLANIDGVNQHLVVRH 571

Query: 183 GDHILQNVRDFSEGLN 230
           GD++LQ +RD S+ LN
Sbjct: 572 GDYLLQTIRDLSQELN 587


>ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine
           max]
          Length = 920

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/76 (72%), Positives = 61/76 (80%)
 Frame = +3

Query: 3   EVKLYHMLLDMRLKLARIKGIAPYAICGDQTIQKIALCCPSTKARLANIDGVNQHLVTTY 182
           E +LY MLL+ RLKLAR  G APYAICGDQTI+KIAL  PSTKARLANIDGVNQHLVT Y
Sbjct: 548 EGQLYQMLLEERLKLARSVGTAPYAICGDQTIKKIALTRPSTKARLANIDGVNQHLVTEY 607

Query: 183 GDHILQNVRDFSEGLN 230
           GD  LQ ++  S+ LN
Sbjct: 608 GDDFLQVIQKLSQVLN 623


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