BLASTX nr result

ID: Coptis21_contig00030762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030762
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29
emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]   131   7e-29
gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indi...   119   3e-25
dbj|BAG97506.1| unnamed protein product [Oryza sativa Japonica G...   119   3e-25
gb|EAZ14601.1| hypothetical protein OsJ_04525 [Oryza sativa Japo...   119   3e-25

>ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
           gi|297739328|emb|CBI28979.3| unnamed protein product
           [Vitis vinifera]
          Length = 585

 Score =  133 bits (334), Expect = 2e-29
 Identities = 60/91 (65%), Positives = 77/91 (84%)
 Frame = -2

Query: 321 SVVGAIQACGELGALDQGRWIHVCVEKNDIICDVVVQTALLDMYMKCGRVNDAHRLFNSM 142
           SVVGA+ AC +LGALDQGRWIH+ +++N ++ D+VVQTAL+DMY+KCG  ++A R+FNSM
Sbjct: 307 SVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSM 366

Query: 141 LQKNFVSWNVMIVGLGMNGHGNEALKLFAQM 49
            ++N VSWNVMIVGLGMNG G EAL+ F QM
Sbjct: 367 PERNVVSWNVMIVGLGMNGFGKEALECFTQM 397


>emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
          Length = 585

 Score =  131 bits (329), Expect = 7e-29
 Identities = 59/91 (64%), Positives = 76/91 (83%)
 Frame = -2

Query: 321 SVVGAIQACGELGALDQGRWIHVCVEKNDIICDVVVQTALLDMYMKCGRVNDAHRLFNSM 142
           SVVGA+ AC +LGALDQGRWIH+ +++N ++ D+VVQTAL+DMY+KCG  ++A  +FNSM
Sbjct: 307 SVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSM 366

Query: 141 LQKNFVSWNVMIVGLGMNGHGNEALKLFAQM 49
            ++N VSWNVMIVGLGMNG G EAL+ F QM
Sbjct: 367 PERNVVSWNVMIVGLGMNGFGKEALECFXQM 397



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/59 (42%), Positives = 36/59 (61%)
 Frame = -2

Query: 225 DVVVQTALLDMYMKCGRVNDAHRLFNSMLQKNFVSWNVMIVGLGMNGHGNEALKLFAQM 49
           D+V   +++D Y K G +  A  +F+ MLQKN +SW++MI G   +    EAL LF QM
Sbjct: 238 DLVSWNSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQM 296


>gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indica Group]
          Length = 589

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/94 (57%), Positives = 75/94 (79%)
 Frame = -2

Query: 321 SVVGAIQACGELGALDQGRWIHVCVEKNDIICDVVVQTALLDMYMKCGRVNDAHRLFNSM 142
           + VGA+ AC +LGAL+QGRW+H  +EK  ++ DVVVQTAL+DMY+KCGR++ A  +F SM
Sbjct: 312 AAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESM 371

Query: 141 LQKNFVSWNVMIVGLGMNGHGNEALKLFAQMREQ 40
            +K+ V+WNVMIVGLG +G+G +A+KLF QM  +
Sbjct: 372 PKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETE 405


>dbj|BAG97506.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 483

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/94 (57%), Positives = 75/94 (79%)
 Frame = -2

Query: 321 SVVGAIQACGELGALDQGRWIHVCVEKNDIICDVVVQTALLDMYMKCGRVNDAHRLFNSM 142
           + VGA+ AC +LGAL+QGRW+H  +EK  ++ DVVVQTAL+DMY+KCGR++ A  +F SM
Sbjct: 206 AAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESM 265

Query: 141 LQKNFVSWNVMIVGLGMNGHGNEALKLFAQMREQ 40
            +K+ V+WNVMIVGLG +G+G +A+KLF QM  +
Sbjct: 266 PKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETE 299


>gb|EAZ14601.1| hypothetical protein OsJ_04525 [Oryza sativa Japonica Group]
          Length = 616

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/94 (57%), Positives = 75/94 (79%)
 Frame = -2

Query: 321 SVVGAIQACGELGALDQGRWIHVCVEKNDIICDVVVQTALLDMYMKCGRVNDAHRLFNSM 142
           + VGA+ AC +LGAL+QGRW+H  +EK  ++ DVVVQTAL+DMY+KCGR++ A  +F SM
Sbjct: 312 AAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESM 371

Query: 141 LQKNFVSWNVMIVGLGMNGHGNEALKLFAQMREQ 40
            +K+ V+WNVMIVGLG +G+G +A+KLF QM  +
Sbjct: 372 PKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETE 405


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