BLASTX nr result

ID: Coptis21_contig00030744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030744
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634725.1| PREDICTED: uncharacterized protein LOC100264...   100   2e-19
emb|CBI26624.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002533083.1| conserved hypothetical protein [Ricinus comm...    99   5e-19
emb|CAH66826.1| OSIGBa0148A10.3 [Oryza sativa Indica Group]            98   6e-19
ref|XP_003572638.1| PREDICTED: uncharacterized protein LOC100836...    97   1e-18

>ref|XP_003634725.1| PREDICTED: uncharacterized protein LOC100264016 [Vitis vinifera]
          Length = 2563

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 56/119 (47%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = -3

Query: 354 SFDFFKVLPSNPFTXXXXXXXXXXXXXIEYIGWSPPNRTSTVKPPNMMYKHLHPLLDLLM 175
           SFDFF  L  N                IEYIG SP +    ++ P +MYKHL P +DLL+
Sbjct: 611 SFDFFINLLGNSSVLSIDVQQSVLSLLIEYIGRSPKSEIP-IRVPALMYKHLQPFIDLLI 669

Query: 174 YSPVKDIQDQAYILTQAAMLSTGLFDRNCLEIDAWLAFLPGY-RRDKSSMGSAAVEVFQ 1
           +S  +DI++QA+ L  AAM STG+FD N  E+ AW  FLPGY R  KSS+ +  VEVFQ
Sbjct: 670 FSSTRDIREQAFYLALAAMFSTGVFDSNISELGAWFLFLPGYGRASKSSVDTQGVEVFQ 728


>emb|CBI26624.3| unnamed protein product [Vitis vinifera]
          Length = 2565

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 56/119 (47%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = -3

Query: 354 SFDFFKVLPSNPFTXXXXXXXXXXXXXIEYIGWSPPNRTSTVKPPNMMYKHLHPLLDLLM 175
           SFDFF  L  N                IEYIG SP +    ++ P +MYKHL P +DLL+
Sbjct: 593 SFDFFINLLGNSSVLSIDVQQSVLSLLIEYIGRSPKSEIP-IRVPALMYKHLQPFIDLLI 651

Query: 174 YSPVKDIQDQAYILTQAAMLSTGLFDRNCLEIDAWLAFLPGY-RRDKSSMGSAAVEVFQ 1
           +S  +DI++QA+ L  AAM STG+FD N  E+ AW  FLPGY R  KSS+ +  VEVFQ
Sbjct: 652 FSSTRDIREQAFYLALAAMFSTGVFDSNISELGAWFLFLPGYGRASKSSVDTQGVEVFQ 710


>ref|XP_002533083.1| conserved hypothetical protein [Ricinus communis]
           gi|223527122|gb|EEF29298.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2587

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 55/109 (50%), Positives = 68/109 (62%)
 Frame = -3

Query: 354 SFDFFKVLPSNPFTXXXXXXXXXXXXXIEYIGWSPPNRTSTVKPPNMMYKHLHPLLDLLM 175
           SFDFF  L SNP               +EYI WSP +  + ++ P MMYKHL P L+LL+
Sbjct: 652 SFDFFMNLLSNPSELPSNLLSSLLSLLVEYIRWSPGSGIA-IRTPQMMYKHLQPFLNLLL 710

Query: 174 YSPVKDIQDQAYILTQAAMLSTGLFDRNCLEIDAWLAFLPGYRRDKSSM 28
           +SPV DI+DQ+Y L +AAM STG FDRN  EI  W  FLPG+   KSS+
Sbjct: 711 FSPV-DIKDQSYNLARAAMSSTGAFDRNLDEIILWFLFLPGFSTVKSSV 758


>emb|CAH66826.1| OSIGBa0148A10.3 [Oryza sativa Indica Group]
          Length = 2615

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/108 (47%), Positives = 67/108 (62%), Gaps = 5/108 (4%)
 Frame = -3

Query: 354  SFDFFKVLPSNPFTXXXXXXXXXXXXXIEYIG-----WSPPNRTSTVKPPNMMYKHLHPL 190
            SFDFFKV+P NP               +EY G     W P       K P  MYK+L PL
Sbjct: 700  SFDFFKVMPPNPLDLSMDEQQSLLSLLVEYSGQSDGYWCPE------KVPESMYKYLQPL 753

Query: 189  LDLLMYSPVKDIQDQAYILTQAAMLSTGLFDRNCLEIDAWLAFLPGYR 46
            +D++++S VK I+D+AYIL +AA++S+G FD+N  EIDAWLAFLP Y+
Sbjct: 754  IDIMLHSQVKSIRDKAYILVKAAVVSSGAFDQNIAEIDAWLAFLPCYK 801


>ref|XP_003572638.1| PREDICTED: uncharacterized protein LOC100836046 [Brachypodium
           distachyon]
          Length = 1306

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/107 (46%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
 Frame = -3

Query: 354 SFDFFKVLPSNPFTXXXXXXXXXXXXXIEYIG-----WSPPNRTSTVKPPNMMYKHLHPL 190
           SFDFF+V+P N                 EY G     W P       + P  MYKHL PL
Sbjct: 463 SFDFFRVIPPNLLDLSKDEQQCLLSLLSEYAGQCEGHWDPE------RVPESMYKHLQPL 516

Query: 189 LDLLMYSPVKDIQDQAYILTQAAMLSTGLFDRNCLEIDAWLAFLPGY 49
           +D++++S VK I+DQAYIL +AA+ S+G FD+N  EIDAWL FLPGY
Sbjct: 517 IDIMLHSQVKSIRDQAYILVKAALASSGAFDQNSAEIDAWLVFLPGY 563


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