BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030718
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...    93   3e-17
ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA h...    92   3e-17
ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    91   1e-16
ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    87   1e-15
ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    82   5e-14

>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Vitis vinifera]
          Length = 1289

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
 Frame = -2

Query: 258 IDLDKTTVTLEPDRVSNGGLQFSGNDRVLYQPRERKSLLGLDSLAIAKR-ESRGEGEFKV 82
           IDLD+ TVT EPD+   GGL   G DRV+++P +RKSLLGLD LA AKR  S+ +G FKV
Sbjct: 11  IDLDQATVTFEPDQGGGGGLHVPGKDRVVFRPPQRKSLLGLDVLADAKRGGSKADGAFKV 70

Query: 81  PKERLLFAISDFEEEDKSTSSGLDEE 4
           P+E+    ++  +EE+ S SSG+DEE
Sbjct: 71  PREKGASVVASMDEEESSLSSGIDEE 96


>ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
           truncatula] gi|355486522|gb|AES67725.1|
           Pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Medicago truncatula]
          Length = 1269

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/90 (55%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = -2

Query: 270 NTEAIDLDKTTVTLEPDRVSNGGLQFSGNDRVLYQPRERKSLLGLDSLAIAKR-ESRGEG 94
           N E +D++KTT TLEP++ + GGL   G DRV+Y   ERKS LGLD+LAIAKR ES+ +G
Sbjct: 7   NAEIVDINKTTTTLEPEKSTGGGLYVPGKDRVVYVAPERKSRLGLDTLAIAKRGESQSDG 66

Query: 93  EFKVPKERLLFAISDFEEEDKSTSSGLDEE 4
            FKVPKE      +  E+EDKS SS + EE
Sbjct: 67  AFKVPKEITTSIAAAAEDEDKSESSDVVEE 96


>ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Glycine max]
          Length = 1270

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/95 (53%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
 Frame = -2

Query: 279 QKNNTEA--IDLDKTTVTLEPDRVSNGGLQFSGNDRVLYQPRERKSLLGLDSLAIAKRES 106
           +K+ T A  ID+DKTT TLE ++ ++GGL   G DRV+Y P+ERKS LGLD+LA AKR  
Sbjct: 2   EKDGTGAGVIDIDKTTTTLEQEKPTSGGLYVPGKDRVVYVPQERKSRLGLDALASAKRSQ 61

Query: 105 RGEGEFKVPKERLLFAISDFEEEDKSTSSGLDEEG 1
              G FKVPKER +   +  E+EDKS SS  +E G
Sbjct: 62  HDVG-FKVPKERTISIAASAEDEDKSESSVSEESG 95


>ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Glycine max]
          Length = 1272

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/86 (52%), Positives = 59/86 (68%)
 Frame = -2

Query: 258 IDLDKTTVTLEPDRVSNGGLQFSGNDRVLYQPRERKSLLGLDSLAIAKRESRGEGEFKVP 79
           +D+DK T TLEP++ ++GGL   G DR++Y P+ERKS LGLD+LA AKR     G FKVP
Sbjct: 13  VDIDKITATLEPEKPTSGGLYVPGKDRMVYVPQERKSRLGLDALASAKRSQHDAG-FKVP 71

Query: 78  KERLLFAISDFEEEDKSTSSGLDEEG 1
           KER +   +  E+EDKS  S  +E G
Sbjct: 72  KERTISIAASAEDEDKSELSVSEESG 97


>ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Cucumis sativus]
          Length = 1298

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/88 (44%), Positives = 58/88 (65%)
 Frame = -2

Query: 264 EAIDLDKTTVTLEPDRVSNGGLQFSGNDRVLYQPRERKSLLGLDSLAIAKRESRGEGEFK 85
           +AID+D+TT+ LEP+  + GGL   G D+ +++P ER+S LGLD LA AKR    +  FK
Sbjct: 8   DAIDIDRTTLLLEPENNTEGGLSVPGKDKPVFRPPERRSHLGLDVLANAKRGGSNDNGFK 67

Query: 84  VPKERLLFAISDFEEEDKSTSSGLDEEG 1
           +P++ +   +S  EEED   SSG+ + G
Sbjct: 68  IPQQSIASFVSSMEEEDTIESSGVTDSG 95