BLASTX nr result
ID: Coptis21_contig00030707
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030707 (384 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat... 147 9e-34 emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera] 145 3e-33 ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat... 139 2e-31 ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat... 139 2e-31 ref|XP_002891745.1| pentatricopeptide repeat-containing protein ... 134 6e-30 >ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330-like [Vitis vinifera] Length = 464 Score = 147 bits (371), Expect = 9e-34 Identities = 69/126 (54%), Positives = 94/126 (74%) Frame = +1 Query: 1 CSYNILINACCLCNSFDDAWKLFNQMIKNRISPNNVTFATLINGLCLNGKLDEAFKLKED 180 C+YN+LINACC S DAW +F++M++ + PN VTF TLI+GLC + +LDEAF+LKED Sbjct: 149 CTYNVLINACCSSGSLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRLDEAFRLKED 208 Query: 181 MVRKYGLKGNVCVYTSLIKGLCKVKEMDLAFKVKEEMVVEMNLGVDSAVYNTLISGLLGS 360 MV+ + +K N VY SL+KGLC+V E+ LAF++K+EMV L +DS +Y+TLI+ L Sbjct: 209 MVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVAN-KLRLDSGIYSTLIAALFKV 267 Query: 361 GRKGEV 378 GRK EV Sbjct: 268 GRKDEV 273 Score = 69.7 bits (169), Expect = 2e-10 Identities = 42/125 (33%), Positives = 66/125 (52%) Frame = +1 Query: 7 YNILINACCLCNSFDDAWKLFNQMIKNRISPNNVTFATLINGLCLNGKLDEAFKLKEDMV 186 Y L+ C N A++L +M+ N++ ++ ++TLI L G+ DE F + E+M Sbjct: 222 YASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEM- 280 Query: 187 RKYGLKGNVCVYTSLIKGLCKVKEMDLAFKVKEEMVVEMNLGVDSAVYNTLISGLLGSGR 366 R+ G K + Y ++I G C K+ + A+ V EEMV + D YN +ISGL G+ Sbjct: 281 RENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAK-GCKPDVISYNVIISGLCKEGK 339 Query: 367 KGEVN 381 E N Sbjct: 340 WREAN 344 Score = 56.2 bits (134), Expect = 3e-06 Identities = 32/97 (32%), Positives = 53/97 (54%) Frame = +1 Query: 4 SYNILINACCLCNSFDDAWKLFNQMIKNRISPNNVTFATLINGLCLNGKLDEAFKLKEDM 183 +YN +I+ C F+ A+ + +M+ P+ +++ +I+GLC GK EA L EDM Sbjct: 291 TYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDM 350 Query: 184 VRKYGLKGNVCVYTSLIKGLCKVKEMDLAFKVKEEMV 294 R+ G +V Y L GLC+ + + A + +EMV Sbjct: 351 PRR-GCTPDVGSYRILFDGLCEGMQFNEAAFILDEMV 386 >emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera] Length = 418 Score = 145 bits (367), Expect = 3e-33 Identities = 69/126 (54%), Positives = 93/126 (73%) Frame = +1 Query: 1 CSYNILINACCLCNSFDDAWKLFNQMIKNRISPNNVTFATLINGLCLNGKLDEAFKLKED 180 C+YNILINACCL DAW +F++M++ + PN VTF TLI+GLC + +LDEA +LKED Sbjct: 149 CTYNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRLDEASRLKED 208 Query: 181 MVRKYGLKGNVCVYTSLIKGLCKVKEMDLAFKVKEEMVVEMNLGVDSAVYNTLISGLLGS 360 MV+ + +K N VY SL+KGLC+V E+ LAF++K+EMV L +DS +Y+TLI+ L Sbjct: 209 MVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVAN-KLRLDSGIYSTLIAALFKV 267 Query: 361 GRKGEV 378 GRK EV Sbjct: 268 GRKDEV 273 Score = 71.2 bits (173), Expect = 8e-11 Identities = 43/125 (34%), Positives = 67/125 (53%) Frame = +1 Query: 7 YNILINACCLCNSFDDAWKLFNQMIKNRISPNNVTFATLINGLCLNGKLDEAFKLKEDMV 186 Y L+ C N A++L +M+ N++ ++ ++TLI L G+ DE F + E+M Sbjct: 222 YASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEM- 280 Query: 187 RKYGLKGNVCVYTSLIKGLCKVKEMDLAFKVKEEMVVEMNLGVDSAVYNTLISGLLGSGR 366 R+ G K + Y ++I G C K+ + A+ V EEMVV+ D YN +ISGL G+ Sbjct: 281 RENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVK-GCKPDVISYNVIISGLCKEGK 339 Query: 367 KGEVN 381 E N Sbjct: 340 WREAN 344 Score = 55.8 bits (133), Expect = 3e-06 Identities = 32/97 (32%), Positives = 53/97 (54%) Frame = +1 Query: 4 SYNILINACCLCNSFDDAWKLFNQMIKNRISPNNVTFATLINGLCLNGKLDEAFKLKEDM 183 +YN +I+ C F+ A+ + +M+ P+ +++ +I+GLC GK EA L EDM Sbjct: 291 TYNAMISGFCNEKDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDM 350 Query: 184 VRKYGLKGNVCVYTSLIKGLCKVKEMDLAFKVKEEMV 294 R+ G +V Y L GLC+ + + A + +EMV Sbjct: 351 PRR-GCTPDVGSYRILFDGLCEGMQFNEAAFILDEMV 386 >ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330-like [Cucumis sativus] Length = 394 Score = 139 bits (351), Expect = 2e-31 Identities = 71/127 (55%), Positives = 90/127 (70%) Frame = +1 Query: 1 CSYNILINACCLCNSFDDAWKLFNQMIKNRISPNNVTFATLINGLCLNGKLDEAFKLKED 180 C++NILI+A CLC D W +F++M K + PN VTF TLI GL LN KL EA +LKED Sbjct: 88 CTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKED 147 Query: 181 MVRKYGLKGNVCVYTSLIKGLCKVKEMDLAFKVKEEMVVEMNLGVDSAVYNTLISGLLGS 360 MV+ Y +K N +YT+LIKG C V E++ AFK+KEEMV N+ + SAVY+TLIS L Sbjct: 148 MVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTS-NVKLVSAVYSTLISALFKH 206 Query: 361 GRKGEVN 381 GRK EV+ Sbjct: 207 GRKEEVS 213 Score = 65.9 bits (159), Expect = 3e-09 Identities = 33/97 (34%), Positives = 56/97 (57%) Frame = +1 Query: 4 SYNILINACCLCNSFDDAWKLFNQMIKNRISPNNVTFATLINGLCLNGKLDEAFKLKEDM 183 +YN +IN C N + A ++ ++M++ P+ +F T+I LC GKLD+A L EDM Sbjct: 230 TYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDM 289 Query: 184 VRKYGLKGNVCVYTSLIKGLCKVKEMDLAFKVKEEMV 294 R+ G +V Y + GLC++ ++ A + +EM+ Sbjct: 290 PRR-GCPPDVLSYRIIFDGLCEMMQLKEATSILDEMI 325 >ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330-like [Cucumis sativus] Length = 527 Score = 139 bits (351), Expect = 2e-31 Identities = 71/127 (55%), Positives = 90/127 (70%) Frame = +1 Query: 1 CSYNILINACCLCNSFDDAWKLFNQMIKNRISPNNVTFATLINGLCLNGKLDEAFKLKED 180 C++NILI+A CLC D W +F++M K + PN VTF TLI GL LN KL EA +LKED Sbjct: 221 CTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKED 280 Query: 181 MVRKYGLKGNVCVYTSLIKGLCKVKEMDLAFKVKEEMVVEMNLGVDSAVYNTLISGLLGS 360 MV+ Y +K N +YT+LIKG C V E++ AFK+KEEMV N+ + SAVY+TLIS L Sbjct: 281 MVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTS-NVKLVSAVYSTLISALFKH 339 Query: 361 GRKGEVN 381 GRK EV+ Sbjct: 340 GRKEEVS 346 Score = 65.9 bits (159), Expect = 3e-09 Identities = 33/97 (34%), Positives = 56/97 (57%) Frame = +1 Query: 4 SYNILINACCLCNSFDDAWKLFNQMIKNRISPNNVTFATLINGLCLNGKLDEAFKLKEDM 183 +YN +IN C N + A ++ ++M++ P+ +F T+I LC GKLD+A L EDM Sbjct: 363 TYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDM 422 Query: 184 VRKYGLKGNVCVYTSLIKGLCKVKEMDLAFKVKEEMV 294 R+ G +V Y + GLC++ ++ A + +EM+ Sbjct: 423 PRR-GCPPDVLSYRIIFDGLCEMMQLKEATSILDEMI 458 >ref|XP_002891745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297337587|gb|EFH68004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 472 Score = 134 bits (338), Expect = 6e-30 Identities = 63/127 (49%), Positives = 92/127 (72%) Frame = +1 Query: 1 CSYNILINACCLCNSFDDAWKLFNQMIKNRISPNNVTFATLINGLCLNGKLDEAFKLKED 180 C+YNILI+ C FDDA KLF++M+K ++ P VTF TLI+GLC N ++ EA K+K+D Sbjct: 153 CTYNILIHGCSQRGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKNLRVKEALKMKQD 212 Query: 181 MVRKYGLKGNVCVYTSLIKGLCKVKEMDLAFKVKEEMVVEMNLGVDSAVYNTLISGLLGS 360 M++ YG++ V +Y SL+K LC++ E+ AFK+K+E E + VDSA+Y+TLIS L+ + Sbjct: 213 MLKVYGVRPTVHIYASLVKALCQIGELSFAFKLKDE-AYEGKIKVDSAIYSTLISSLIKA 271 Query: 361 GRKGEVN 381 GR EV+ Sbjct: 272 GRSNEVS 278 Score = 57.0 bits (136), Expect = 2e-06 Identities = 35/115 (30%), Positives = 59/115 (51%) Frame = +1 Query: 7 YNILINACCLCNSFDDAWKLFNQMIKNRISPNNVTFATLINGLCLNGKLDEAFKLKEDMV 186 Y L+ A C A+KL ++ + +I ++ ++TLI+ L G+ +E ++ E+M Sbjct: 226 YASLVKALCQIGELSFAFKLKDEAYEGKIKVDSAIYSTLISSLIKAGRSNEVSRILEEMS 285 Query: 187 RKYGLKGNVCVYTSLIKGLCKVKEMDLAFKVKEEMVVEMNLGVDSAVYNTLISGL 351 K G K + Y LI G C + + A++V +EM VE L D YN ++ L Sbjct: 286 EK-GCKPDTVTYNVLINGFCVENDSESAYRVLDEM-VEKGLKPDVISYNMILGVL 338