BLASTX nr result

ID: Coptis21_contig00030701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030701
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595828.1| hypothetical protein MTR_2g062280 [Medicago ...    62   5e-08
gb|ABN08121.1| hypothetical protein MtrDRAFT_AC155880g21v2 [Medi...    62   5e-08
ref|XP_002330902.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_003545954.1| PREDICTED: uncharacterized protein LOC100775...    57   1e-06
ref|NP_001236134.1| uncharacterized protein LOC100306001 [Glycin...    57   1e-06

>ref|XP_003595828.1| hypothetical protein MTR_2g062280 [Medicago truncatula]
           gi|355484876|gb|AES66079.1| hypothetical protein
           MTR_2g062280 [Medicago truncatula]
          Length = 140

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/106 (34%), Positives = 57/106 (53%)
 Frame = -3

Query: 495 VGHNEEMKLVICEEEMKATTDSNGEAGPIKEWQKENEGKGVSLGHHFTEEEKQLQIVSVQ 316
           + H    +L++ EE+      S+ + G       E++G+  SLG HFTEEEKQLQ+V +Q
Sbjct: 43  IDHKSLKQLIVGEEKESTKKCSSSDEG-------ESKGRN-SLGEHFTEEEKQLQLVRMQ 94

Query: 315 DXXXXXXXXXXGRMLSRYVKVFSHLVKLKKDHRLGSARKKSVIRFT 178
                       +++ RY KV  H++K K+D  LG A KK V + +
Sbjct: 95  Q-KDNLQGLKFKKLVRRYAKVLGHMMKSKRDPHLGDAGKKPVFKLS 139


>gb|ABN08121.1| hypothetical protein MtrDRAFT_AC155880g21v2 [Medicago truncatula]
          Length = 154

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/106 (34%), Positives = 57/106 (53%)
 Frame = -3

Query: 495 VGHNEEMKLVICEEEMKATTDSNGEAGPIKEWQKENEGKGVSLGHHFTEEEKQLQIVSVQ 316
           + H    +L++ EE+      S+ + G       E++G+  SLG HFTEEEKQLQ+V +Q
Sbjct: 57  IDHKSLKQLIVGEEKESTKKCSSSDEG-------ESKGRN-SLGEHFTEEEKQLQLVRMQ 108

Query: 315 DXXXXXXXXXXGRMLSRYVKVFSHLVKLKKDHRLGSARKKSVIRFT 178
                       +++ RY KV  H++K K+D  LG A KK V + +
Sbjct: 109 Q-KDNLQGLKFKKLVRRYAKVLGHMMKSKRDPHLGDAGKKPVFKLS 153


>ref|XP_002330902.1| predicted protein [Populus trichocarpa] gi|222872724|gb|EEF09855.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
 Frame = -3

Query: 486 NEEMKLVICEEEMKATTDSNGEAGPIKEWQKENEGKGVSLGHHFTEEEKQLQIVSVQDXX 307
           +E  KLV+  +E +   D N E        ++  G   SLG HF  EEKQLQ+V+++   
Sbjct: 87  SEPTKLVL--QETRGGDDENIE--------RKLSGSRNSLGQHFKGEEKQLQLVTMKQAK 136

Query: 306 XXXXXXXXGRMLSRYVKVFSHLVKLKKDHRLGS-ARKKSVIR 184
                     M+ RYVKV SHL+++K+D R+ + +RKKS++R
Sbjct: 137 EGIEGVKLKGMVGRYVKVLSHLIRIKRDTRMNNGSRKKSLLR 178


>ref|XP_003545954.1| PREDICTED: uncharacterized protein LOC100775707 [Glycine max]
          Length = 195

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
 Frame = -3

Query: 522 DTKGEAELIVGHNEEMKLVICEEEMKATTDSNGEAGPIKEWQKENEGKGVSLGHHFTEEE 343
           D K   +LI+G ++       +E  K ++++N         +    G   SLG HFTEEE
Sbjct: 83  DHKSLKQLIIGDDDH------KEAKKGSSNNNSNNNNSDHERGGKGGSRNSLGEHFTEEE 136

Query: 342 KQ--LQIVSVQDXXXXXXXXXXGRMLSRYVKVFSHLVKLKKD-HRLGSARKKSVIRFT 178
           KQ  LQ+V +Q            +++ RY KV  HL+K K+D H  G A KK V + +
Sbjct: 137 KQHNLQLVRMQQNKDNLQGLKLKKLVRRYAKVLGHLMKAKRDPHLGGDAGKKPVFKLS 194


>ref|NP_001236134.1| uncharacterized protein LOC100306001 [Glycine max]
           gi|255627235|gb|ACU13962.1| unknown [Glycine max]
          Length = 195

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
 Frame = -3

Query: 522 DTKGEAELIVGHNEEMKLVICEEEMKATTDSNGEAGPIKEWQKENEGKGVS---LGHHFT 352
           D K   +LI+G ++        +E K   ++N           E  GKG S   LG HFT
Sbjct: 81  DHKSLKQLIIGDDDH-------KEAKKKGNNNNNNNDNNSDDHERGGKGGSRNSLGEHFT 133

Query: 351 EEEKQ--LQIVSVQDXXXXXXXXXXGRMLSRYVKVFSHLVKLKKD-HRLGSARKKSVIRF 181
           EEEKQ  LQ+V +Q            +++ RY KV  HL+K K+D H  G A KK V + 
Sbjct: 134 EEEKQHNLQLVRMQQNKDNLQGLKFKKLVRRYAKVLGHLMKAKRDPHLGGDAGKKPVFKL 193

Query: 180 T 178
           +
Sbjct: 194 S 194


Top