BLASTX nr result

ID: Coptis21_contig00030694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030694
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76987.1| hypothetical protein VITISV_027948 [Vitis vinifera]    63   3e-08
ref|XP_002279790.2| PREDICTED: probable receptor-like protein ki...    60   1e-07
ref|XP_002527020.1| receptor serine/threonine kinase, putative [...    60   2e-07
ref|XP_002314844.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002527018.1| receptor serine/threonine kinase, putative [...    59   4e-07

>emb|CAN76987.1| hypothetical protein VITISV_027948 [Vitis vinifera]
          Length = 620

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
 Frame = +2

Query: 116 GVGIVLLISRALHKMISTC---WRKKTEGSTNVEVFLENYRGLGLQRYNYSEIKKMTNSF 286
           G+GI++L++  +    +     W+K+T    NVEVFL N+  L  +RY YS++KKMTNSF
Sbjct: 260 GIGILILLALCIMIKFNKSLMFWKKQTGNHPNVEVFLRNHESLAPKRYRYSDVKKMTNSF 319

Query: 287 KDTLG 301
           KD LG
Sbjct: 320 KDKLG 324


>ref|XP_002279790.2| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Vitis vinifera]
          Length = 681

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
 Frame = +2

Query: 116 GVGIVLLISRALHKMISTC---WRKKTEGSTNVEVFLENYRGLGLQRYNYSEIKKMTNSF 286
           G+GI++L++  +    +     W+K+     NVEVFL N+  L  +RY YS++KKMTNSF
Sbjct: 321 GIGILILLALCIMIKFNKSLMFWKKQMGNHPNVEVFLRNHESLAPKRYRYSDVKKMTNSF 380

Query: 287 KDTLG 301
           KD LG
Sbjct: 381 KDKLG 385


>ref|XP_002527020.1| receptor serine/threonine kinase, putative [Ricinus communis]
           gi|223533655|gb|EEF35392.1| receptor serine/threonine
           kinase, putative [Ricinus communis]
          Length = 405

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/47 (51%), Positives = 35/47 (74%)
 Frame = +2

Query: 161 ISTCWRKKTEGSTNVEVFLENYRGLGLQRYNYSEIKKMTNSFKDTLG 301
           ++ CW+K+TE S ++E FL N   + ++RY Y+E+KKMT SFKD LG
Sbjct: 49  VNFCWKKQTEESKSIEAFLRNGGPMAMERYKYTEVKKMTQSFKDKLG 95


>ref|XP_002314844.1| predicted protein [Populus trichocarpa] gi|222863884|gb|EEF01015.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
 Frame = +2

Query: 116 GVGIVLLISRALHKMIS----TCWRKKTEGSTNVEVFLENYRGLGLQRYNYSEIKKMTNS 283
           GV I+ +    + K  S    +CWRK T GS ++EVFL NY  L  +RY+YSE+KKMT +
Sbjct: 5   GVLIITICCVIIRKYSSIHFLSCWRK-TRGSQSIEVFLRNYGTLAPERYSYSELKKMTKN 63

Query: 284 FKDTLG 301
           FK+ LG
Sbjct: 64  FKEKLG 69


>ref|XP_002527018.1| receptor serine/threonine kinase, putative [Ricinus communis]
           gi|223533653|gb|EEF35390.1| receptor serine/threonine
           kinase, putative [Ricinus communis]
          Length = 435

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/63 (44%), Positives = 41/63 (65%)
 Frame = +2

Query: 113 TGVGIVLLISRALHKMISTCWRKKTEGSTNVEVFLENYRGLGLQRYNYSEIKKMTNSFKD 292
           T V ++++I   L +    CW+K+TE S  +E FL N   + ++RY Y+E+KKMT SFKD
Sbjct: 41  TSVVVLMIILCYLRR---DCWKKQTEESKTIEAFLRNDGPMAMKRYKYTEVKKMTQSFKD 97

Query: 293 TLG 301
            LG
Sbjct: 98  KLG 100


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