BLASTX nr result

ID: Coptis21_contig00030687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030687
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313260.1| white-brown-complex ABC transporter family [...   231   6e-59
ref|XP_003609516.1| ABC transporter G family member [Medicago tr...   227   7e-58
ref|XP_003556918.1| PREDICTED: ABC transporter G family member 2...   225   3e-57
ref|XP_002276041.1| PREDICTED: ABC transporter G family member 2...   225   3e-57
emb|CAN68542.1| hypothetical protein VITISV_020445 [Vitis vinifera]   225   3e-57

>ref|XP_002313260.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222849668|gb|EEE87215.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 566

 Score =  231 bits (588), Expect = 6e-59
 Identities = 108/154 (70%), Positives = 124/154 (80%), Gaps = 2/154 (1%)
 Frame = +1

Query: 1   VGLNPSFTAFAFFVFIVWMIXXXXXXXXXXXXXXXPDFISGNSLICTVLGAFFLFSGYFI 180
           VGLNPS  AFAFFVF+VW+I               PDFISGNSLICTVLGAFFLFSGYFI
Sbjct: 413 VGLNPSIAAFAFFVFVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFI 472

Query: 181 PRDNIPKYWLFMYYISLYKYPLDALLVNEYWSMRERCFS--ALNSTSCSLTGGDILRMRG 354
           P++NIPKYWLFMYY+SLY+YPLD+LL NEYWS+R  CFS    + ++C LTG D+L+ RG
Sbjct: 473 PKENIPKYWLFMYYVSLYRYPLDSLLTNEYWSVRNECFSWQGQDHSTCVLTGNDVLKSRG 532

Query: 355 LEKDTRLMNVGIMFGFFLLYRVLCWIILARRASK 456
           L+KDTR +NVGIMFGFF+ YRVLCWIILARRASK
Sbjct: 533 LDKDTRWINVGIMFGFFVFYRVLCWIILARRASK 566


>ref|XP_003609516.1| ABC transporter G family member [Medicago truncatula]
           gi|355510571|gb|AES91713.1| ABC transporter G family
           member [Medicago truncatula]
          Length = 643

 Score =  227 bits (579), Expect = 7e-58
 Identities = 103/155 (66%), Positives = 123/155 (79%)
 Frame = +1

Query: 1   VGLNPSFTAFAFFVFIVWMIXXXXXXXXXXXXXXXPDFISGNSLICTVLGAFFLFSGYFI 180
           VGLNPS TAF FF F+VW+I               PDFISGNSLICTVLGAFFLFSGYFI
Sbjct: 489 VGLNPSLTAFTFFTFVVWLIVLMASSLVLFLSSVSPDFISGNSLICTVLGAFFLFSGYFI 548

Query: 181 PRDNIPKYWLFMYYISLYKYPLDALLVNEYWSMRERCFSALNSTSCSLTGGDILRMRGLE 360
           P+++IPKYWLFMYY+SLY+YPLDALL NEYW++   CFS  +S+ C +TG D+L+ RG+E
Sbjct: 549 PKESIPKYWLFMYYVSLYRYPLDALLTNEYWNVGNECFSQGSSSMCLVTGFDVLKSRGIE 608

Query: 361 KDTRLMNVGIMFGFFLLYRVLCWIILARRASKTML 465
           KD R MNVGIMFGFF+ YR+LCW+ILAR+ASKT +
Sbjct: 609 KDNRWMNVGIMFGFFVFYRLLCWVILARKASKTTI 643


>ref|XP_003556918.1| PREDICTED: ABC transporter G family member 23-like [Glycine max]
          Length = 656

 Score =  225 bits (574), Expect = 3e-57
 Identities = 104/156 (66%), Positives = 123/156 (78%), Gaps = 1/156 (0%)
 Frame = +1

Query: 1   VGLNPSFTAFAFFVFIVWMIXXXXXXXXXXXXXXXPDFISGNSLICTVLGAFFLFSGYFI 180
           VGLNPS +AF FF F+VW+I               PDFISGNSLICTVLGAFFLFSGYFI
Sbjct: 501 VGLNPSLSAFTFFTFVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFI 560

Query: 181 PRDNIPKYWLFMYYISLYKYPLDALLVNEYWSMRERCFS-ALNSTSCSLTGGDILRMRGL 357
           P+++IPKYW+FMYY+SLY+YPLDALL NEYW++R  CFS  +  + C +TG D+L+ RGL
Sbjct: 561 PKESIPKYWIFMYYVSLYRYPLDALLTNEYWNVRSECFSHQIEGSQCLITGFDVLKSRGL 620

Query: 358 EKDTRLMNVGIMFGFFLLYRVLCWIILARRASKTML 465
           E+D R MNVGIM GFF+LYRVLCWIILAR+ASKT L
Sbjct: 621 ERDNRWMNVGIMLGFFVLYRVLCWIILARKASKTTL 656


>ref|XP_002276041.1| PREDICTED: ABC transporter G family member 23 [Vitis vinifera]
          Length = 650

 Score =  225 bits (574), Expect = 3e-57
 Identities = 103/157 (65%), Positives = 124/157 (78%), Gaps = 2/157 (1%)
 Frame = +1

Query: 1   VGLNPSFTAFAFFVFIVWMIXXXXXXXXXXXXXXXPDFISGNSLICTVLGAFFLFSGYFI 180
           VGLNPS  AF FF F+VW+I               PDFISGNSLICTVLGAFFLFSGYFI
Sbjct: 494 VGLNPSIAAFTFFTFVVWLIVMMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFI 553

Query: 181 PRDNIPKYWLFMYYISLYKYPLDALLVNEYWSMRERCFS--ALNSTSCSLTGGDILRMRG 354
           P+++IP+YWLFMYY+SLY+YPLD+LL+NEYWSM+  CFS    + + C +TG D+L+ RG
Sbjct: 554 PKESIPRYWLFMYYVSLYRYPLDSLLINEYWSMKGECFSWQVQDHSKCLITGNDVLKGRG 613

Query: 355 LEKDTRLMNVGIMFGFFLLYRVLCWIILARRASKTML 465
           L+KDTR MNVGIMFGFF+ YR+LCWIIL+RRASKT +
Sbjct: 614 LDKDTRWMNVGIMFGFFIFYRLLCWIILSRRASKTTI 650


>emb|CAN68542.1| hypothetical protein VITISV_020445 [Vitis vinifera]
          Length = 650

 Score =  225 bits (574), Expect = 3e-57
 Identities = 103/157 (65%), Positives = 124/157 (78%), Gaps = 2/157 (1%)
 Frame = +1

Query: 1   VGLNPSFTAFAFFVFIVWMIXXXXXXXXXXXXXXXPDFISGNSLICTVLGAFFLFSGYFI 180
           VGLNPS  AF FF F+VW+I               PDFISGNSLICTVLGAFFLFSGYFI
Sbjct: 494 VGLNPSIAAFTFFTFVVWLIVMMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFI 553

Query: 181 PRDNIPKYWLFMYYISLYKYPLDALLVNEYWSMRERCFS--ALNSTSCSLTGGDILRMRG 354
           P+++IP+YWLFMYY+SLY+YPLD+LL+NEYWSM+  CFS    + + C +TG D+L+ RG
Sbjct: 554 PKESIPRYWLFMYYVSLYRYPLDSLLINEYWSMKGECFSWQVQDHSKCLITGNDVLKGRG 613

Query: 355 LEKDTRLMNVGIMFGFFLLYRVLCWIILARRASKTML 465
           L+KDTR MNVGIMFGFF+ YR+LCWIIL+RRASKT +
Sbjct: 614 LDKDTRWMNVGIMFGFFIFYRLLCWIILSRRASKTTI 650


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