BLASTX nr result

ID: Coptis21_contig00030680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030680
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    74   9e-12
ref|XP_003604531.1| hypothetical protein MTR_4g014190 [Medicago ...    72   4e-11
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_004154388.1| PREDICTED: uncharacterized protein LOC101221...    72   6e-11

>ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|222874005|gb|EEF11136.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
 Frame = -3

Query: 370 GKDFYYFRFSDQDDRKKALESGPVFVAGRI-FIIRPWAEDLEIGGEHLKSVPIWVKLYDI 194
           G   +   F     ++ AL  GP F  GR  FI++PW+ D+ +  E LKS PIW+KL ++
Sbjct: 75  GSGVFVLDFESVHGKELALGEGPRFYDGRKPFILKPWSRDMSLEIEELKSAPIWIKLPNL 134

Query: 193 PKIL*TKQGMTMIVSRLGKPHCWDAASQNRSRLDYARACVEVPVDSLYPTHLRFDLGEG 17
              L + + +  IVS +G+P   D  + +R  L +AR CVEV  D + P  +  +  +G
Sbjct: 135 RLHLWSPEALGKIVSLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSITIEDDKG 193


>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
 Frame = -3

Query: 352 FRFSDQDDRKKALESGPVFVAGRIFIIRPWAEDLEIGGEHLKSVPIWVKLYDIPKIL*TK 173
           F+F   +  +  L  GP  + G+  ++R W   +        SVP+W+KL  IP  L T 
Sbjct: 8   FQFKCLNSIEWILSRGPWHLGGKPMLLRKWTPGIVPETFVFDSVPVWIKLGRIPLELWTD 67

Query: 172 QGMTMIVSRLGKPHCWDAASQNRSRLDYARACVEVPVDSLYPTHLRFDL-GEGRIVTV 2
            G+ ++ S +GKP   D A++ R RL YAR CVE+ VDS  P  +  +L GE  IV V
Sbjct: 68  AGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMPIEITVNLRGEEFIVPV 125


>ref|XP_003604531.1| hypothetical protein MTR_4g014190 [Medicago truncatula]
           gi|355505586|gb|AES86728.1| hypothetical protein
           MTR_4g014190 [Medicago truncatula]
          Length = 382

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/105 (35%), Positives = 57/105 (54%)
 Frame = -3

Query: 376 YTGKDFYYFRFSDQDDRKKALESGPVFVAGRIFIIRPWAEDLEIGGEHLKSVPIWVKLYD 197
           Y  + +Y  RF+  DD+   L +GP  +A R  I++ WA D +   E LK VP+W++L +
Sbjct: 165 YHNEGYYVVRFASLDDKNTVLCAGPYTIANRPVIVKSWAPDFDFQKEILKVVPLWIQLPN 224

Query: 196 IPKIL*TKQGMTMIVSRLGKPHCWDAASQNRSRLDYARACVEVPV 62
           +P        ++ I S LG P   D  +  +SR+ YAR  VE+ V
Sbjct: 225 LPLTCWGLDFLSRIGSTLGNPLFADECTSKQSRISYARLLVEIDV 269


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
 Frame = -3

Query: 370 GKDFYYFRFSDQDDRKKALESGPVFVAG-RIFIIRPWAEDLEIGGEHLKSVPIWVKLYDI 194
           G   +   F     ++ AL  GP F  G + FI++PW+ DL +  + LKS PIW+KL ++
Sbjct: 75  GSGVFVLDFESAHGKELALGEGPRFYDGSKPFILKPWSRDLSLEIKELKSAPIWIKLPNL 134

Query: 193 PKIL*TKQGMTMIVSRLGKPHCWDAASQNRSRLDYARACVEVPVDSLYPTHLRFDLGEG 17
              L + + +  I S +G+P   D  + +R  L +AR CVEV  D + P  +  +  +G
Sbjct: 135 RLHLWSPEALGKIASLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSVTIEDDKG 193


>ref|XP_004154388.1| PREDICTED: uncharacterized protein LOC101221036 [Cucumis sativus]
          Length = 431

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
 Frame = -3

Query: 355 YFRFSDQDDRKKALESGPVFVAGRIFIIRPWAEDLEIGGEHLKSVPIWVKLYDIPKIL*T 176
           YF+F      +  L  GP  + G+  ++R W   +        SV +W+KL  IP  L T
Sbjct: 7   YFQFKHLKLIEWILSRGPWHLGGKPMLLRKWTPGIVPESFVFDSVLVWIKLGRIPLELWT 66

Query: 175 KQGMTMIVSRLGKPHCWDAASQNRSRLDYARACVEVPVDSLYPTHLRFDL-GEGRIVTV 2
              + ++ S +GKP   D A++ R  L YAR CVE+ VDS+ P  +  +L GE  IVTV
Sbjct: 67  DASLAVVASAIGKPLSVDLATKERRHLSYARICVELNVDSIMPAEVTVNLRGEEFIVTV 125


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