BLASTX nr result
ID: Coptis21_contig00030670
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030670 (219 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACU22732.1| unknown [Glycine max] 47 7e-09 ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidas... 44 6e-08 ref|XP_002307679.1| predicted protein [Populus trichocarpa] gi|2... 44 6e-08 ref|XP_002300747.1| predicted protein [Populus trichocarpa] gi|1... 44 6e-08 gb|AFK38600.1| unknown [Lotus japonicus] 44 6e-08 >gb|ACU22732.1| unknown [Glycine max] Length = 303 Score = 47.0 bits (110), Expect(2) = 7e-09 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = -1 Query: 84 AIIDE*VGESAKLIRGMFGCARDHQECM 1 AIID+ +GESA+LIRGMFG ARDHQ C+ Sbjct: 207 AIIDKYIGESARLIRGMFGYARDHQPCI 234 Score = 37.7 bits (86), Expect(2) = 7e-09 Identities = 19/23 (82%), Positives = 20/23 (86%) Frame = -2 Query: 218 TGKTLLAGAVASNSDANFLKVGS 150 TGKTLLA A+ASN DANFLKV S Sbjct: 183 TGKTLLARAIASNIDANFLKVVS 205 >ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidase-like [Glycine max] Length = 833 Score = 43.9 bits (102), Expect(2) = 6e-08 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = -1 Query: 84 AIIDE*VGESAKLIRGMFGCARDHQECM 1 AIID+ +GESA+LIR MFG ARDHQ C+ Sbjct: 642 AIIDKYIGESARLIREMFGYARDHQPCI 669 Score = 37.7 bits (86), Expect(2) = 6e-08 Identities = 19/23 (82%), Positives = 20/23 (86%) Frame = -2 Query: 218 TGKTLLAGAVASNSDANFLKVGS 150 TGKTLLA A+ASN DANFLKV S Sbjct: 618 TGKTLLARAIASNIDANFLKVVS 640 >ref|XP_002307679.1| predicted protein [Populus trichocarpa] gi|222857128|gb|EEE94675.1| predicted protein [Populus trichocarpa] Length = 402 Score = 43.9 bits (102), Expect(2) = 6e-08 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = -1 Query: 84 AIIDE*VGESAKLIRGMFGCARDHQECM 1 AIID+ +GESA+LIR MFG ARDHQ C+ Sbjct: 211 AIIDKYIGESARLIREMFGYARDHQPCI 238 Score = 37.7 bits (86), Expect(2) = 6e-08 Identities = 19/23 (82%), Positives = 20/23 (86%) Frame = -2 Query: 218 TGKTLLAGAVASNSDANFLKVGS 150 TGKTLLA A+ASN DANFLKV S Sbjct: 187 TGKTLLARAIASNIDANFLKVVS 209 >ref|XP_002300747.1| predicted protein [Populus trichocarpa] gi|118483383|gb|ABK93592.1| unknown [Populus trichocarpa] gi|222842473|gb|EEE80020.1| predicted protein [Populus trichocarpa] Length = 402 Score = 43.9 bits (102), Expect(2) = 6e-08 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = -1 Query: 84 AIIDE*VGESAKLIRGMFGCARDHQECM 1 AIID+ +GESA+LIR MFG ARDHQ C+ Sbjct: 211 AIIDKYIGESARLIREMFGYARDHQPCI 238 Score = 37.7 bits (86), Expect(2) = 6e-08 Identities = 19/23 (82%), Positives = 20/23 (86%) Frame = -2 Query: 218 TGKTLLAGAVASNSDANFLKVGS 150 TGKTLLA A+ASN DANFLKV S Sbjct: 187 TGKTLLARAIASNIDANFLKVVS 209 >gb|AFK38600.1| unknown [Lotus japonicus] Length = 400 Score = 43.9 bits (102), Expect(2) = 6e-08 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = -1 Query: 84 AIIDE*VGESAKLIRGMFGCARDHQECM 1 AIID+ +GESA+LIR MFG ARDHQ C+ Sbjct: 209 AIIDKYIGESARLIREMFGYARDHQPCI 236 Score = 37.7 bits (86), Expect(2) = 6e-08 Identities = 19/23 (82%), Positives = 20/23 (86%) Frame = -2 Query: 218 TGKTLLAGAVASNSDANFLKVGS 150 TGKTLLA A+ASN DANFLKV S Sbjct: 185 TGKTLLARAIASNIDANFLKVVS 207