BLASTX nr result

ID: Coptis21_contig00030670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030670
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU22732.1| unknown [Glycine max]                                   47   7e-09
ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidas...    44   6e-08
ref|XP_002307679.1| predicted protein [Populus trichocarpa] gi|2...    44   6e-08
ref|XP_002300747.1| predicted protein [Populus trichocarpa] gi|1...    44   6e-08
gb|AFK38600.1| unknown [Lotus japonicus]                               44   6e-08

>gb|ACU22732.1| unknown [Glycine max]
          Length = 303

 Score = 47.0 bits (110), Expect(2) = 7e-09
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = -1

Query: 84  AIIDE*VGESAKLIRGMFGCARDHQECM 1
           AIID+ +GESA+LIRGMFG ARDHQ C+
Sbjct: 207 AIIDKYIGESARLIRGMFGYARDHQPCI 234



 Score = 37.7 bits (86), Expect(2) = 7e-09
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = -2

Query: 218 TGKTLLAGAVASNSDANFLKVGS 150
           TGKTLLA A+ASN DANFLKV S
Sbjct: 183 TGKTLLARAIASNIDANFLKVVS 205


>ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidase-like [Glycine max]
          Length = 833

 Score = 43.9 bits (102), Expect(2) = 6e-08
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -1

Query: 84  AIIDE*VGESAKLIRGMFGCARDHQECM 1
           AIID+ +GESA+LIR MFG ARDHQ C+
Sbjct: 642 AIIDKYIGESARLIREMFGYARDHQPCI 669



 Score = 37.7 bits (86), Expect(2) = 6e-08
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = -2

Query: 218 TGKTLLAGAVASNSDANFLKVGS 150
           TGKTLLA A+ASN DANFLKV S
Sbjct: 618 TGKTLLARAIASNIDANFLKVVS 640


>ref|XP_002307679.1| predicted protein [Populus trichocarpa] gi|222857128|gb|EEE94675.1|
           predicted protein [Populus trichocarpa]
          Length = 402

 Score = 43.9 bits (102), Expect(2) = 6e-08
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -1

Query: 84  AIIDE*VGESAKLIRGMFGCARDHQECM 1
           AIID+ +GESA+LIR MFG ARDHQ C+
Sbjct: 211 AIIDKYIGESARLIREMFGYARDHQPCI 238



 Score = 37.7 bits (86), Expect(2) = 6e-08
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = -2

Query: 218 TGKTLLAGAVASNSDANFLKVGS 150
           TGKTLLA A+ASN DANFLKV S
Sbjct: 187 TGKTLLARAIASNIDANFLKVVS 209


>ref|XP_002300747.1| predicted protein [Populus trichocarpa] gi|118483383|gb|ABK93592.1|
           unknown [Populus trichocarpa]
           gi|222842473|gb|EEE80020.1| predicted protein [Populus
           trichocarpa]
          Length = 402

 Score = 43.9 bits (102), Expect(2) = 6e-08
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -1

Query: 84  AIIDE*VGESAKLIRGMFGCARDHQECM 1
           AIID+ +GESA+LIR MFG ARDHQ C+
Sbjct: 211 AIIDKYIGESARLIREMFGYARDHQPCI 238



 Score = 37.7 bits (86), Expect(2) = 6e-08
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = -2

Query: 218 TGKTLLAGAVASNSDANFLKVGS 150
           TGKTLLA A+ASN DANFLKV S
Sbjct: 187 TGKTLLARAIASNIDANFLKVVS 209


>gb|AFK38600.1| unknown [Lotus japonicus]
          Length = 400

 Score = 43.9 bits (102), Expect(2) = 6e-08
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -1

Query: 84  AIIDE*VGESAKLIRGMFGCARDHQECM 1
           AIID+ +GESA+LIR MFG ARDHQ C+
Sbjct: 209 AIIDKYIGESARLIREMFGYARDHQPCI 236



 Score = 37.7 bits (86), Expect(2) = 6e-08
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = -2

Query: 218 TGKTLLAGAVASNSDANFLKVGS 150
           TGKTLLA A+ASN DANFLKV S
Sbjct: 185 TGKTLLARAIASNIDANFLKVVS 207


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