BLASTX nr result
ID: Coptis21_contig00030667
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030667 (458 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281292.2| PREDICTED: uncharacterized protein LOC100259... 100 9e-20 emb|CBI28097.3| unnamed protein product [Vitis vinifera] 100 9e-20 ref|NP_189091.1| leucine-rich repeat extensin-like protein 4 [Ar... 98 8e-19 ref|XP_002885650.1| predicted protein [Arabidopsis lyrata subsp.... 95 5e-18 ref|XP_002324974.1| predicted protein [Populus trichocarpa] gi|2... 94 1e-17 >ref|XP_002281292.2| PREDICTED: uncharacterized protein LOC100259389 [Vitis vinifera] Length = 752 Score = 100 bits (250), Expect = 9e-20 Identities = 48/64 (75%), Positives = 55/64 (85%) Frame = -2 Query: 193 SSQETFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIAL 14 S+++ ISS LTDAEV YI+ RQLLYYRDEFGDRGE+V+ DPSLVFENPR +NAYIAL Sbjct: 26 SAEQISISSHGHLTDAEVMYIKRRQLLYYRDEFGDRGEDVTVDPSLVFENPRQRNAYIAL 85 Query: 13 QAWK 2 QAWK Sbjct: 86 QAWK 89 >emb|CBI28097.3| unnamed protein product [Vitis vinifera] Length = 192 Score = 100 bits (250), Expect = 9e-20 Identities = 48/64 (75%), Positives = 55/64 (85%) Frame = -2 Query: 193 SSQETFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIAL 14 S+++ ISS LTDAEV YI+ RQLLYYRDEFGDRGE+V+ DPSLVFENPR +NAYIAL Sbjct: 26 SAEQISISSHGHLTDAEVMYIKRRQLLYYRDEFGDRGEDVTVDPSLVFENPRQRNAYIAL 85 Query: 13 QAWK 2 QAWK Sbjct: 86 QAWK 89 >ref|NP_189091.1| leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] gi|75334999|sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precursor gi|9294099|dbj|BAB01951.1| extensin-like protein [Arabidopsis thaliana] gi|332643381|gb|AEE76902.1| leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] Length = 494 Score = 97.8 bits (242), Expect = 8e-19 Identities = 44/63 (69%), Positives = 54/63 (85%) Frame = -2 Query: 190 SQETFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIALQ 11 S ISS + L+D EV++I+ RQLLYYRDEFGDRGENV+ DPSL+FENPR+++AYIALQ Sbjct: 23 SHSLSISSNAPLSDTEVRFIQRRQLLYYRDEFGDRGENVTVDPSLIFENPRLRSAYIALQ 82 Query: 10 AWK 2 AWK Sbjct: 83 AWK 85 >ref|XP_002885650.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297331490|gb|EFH61909.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 492 Score = 95.1 bits (235), Expect = 5e-18 Identities = 43/63 (68%), Positives = 53/63 (84%) Frame = -2 Query: 190 SQETFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIALQ 11 S ISS + L+D EV++I+ RQLLYYRDEFGDRGE V+ DPSL+FENPR+++AYIALQ Sbjct: 23 SHSLSISSNARLSDTEVRFIQRRQLLYYRDEFGDRGEKVTVDPSLIFENPRLRSAYIALQ 82 Query: 10 AWK 2 AWK Sbjct: 83 AWK 85 >ref|XP_002324974.1| predicted protein [Populus trichocarpa] gi|222866408|gb|EEF03539.1| predicted protein [Populus trichocarpa] Length = 509 Score = 94.0 bits (232), Expect = 1e-17 Identities = 44/66 (66%), Positives = 52/66 (78%) Frame = -2 Query: 199 SISSQETFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYI 20 S + Q ISS L+DA+ YI+ RQLLYY+DEFGDRGE V+ DPSLVF NPR++NAYI Sbjct: 26 SAAKQAPTISSYGGLSDADAMYIKKRQLLYYKDEFGDRGERVTVDPSLVFPNPRLRNAYI 85 Query: 19 ALQAWK 2 ALQAWK Sbjct: 86 ALQAWK 91