BLASTX nr result

ID: Coptis21_contig00030667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030667
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281292.2| PREDICTED: uncharacterized protein LOC100259...   100   9e-20
emb|CBI28097.3| unnamed protein product [Vitis vinifera]              100   9e-20
ref|NP_189091.1| leucine-rich repeat extensin-like protein 4 [Ar...    98   8e-19
ref|XP_002885650.1| predicted protein [Arabidopsis lyrata subsp....    95   5e-18
ref|XP_002324974.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17

>ref|XP_002281292.2| PREDICTED: uncharacterized protein LOC100259389 [Vitis vinifera]
          Length = 752

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/64 (75%), Positives = 55/64 (85%)
 Frame = -2

Query: 193 SSQETFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIAL 14
           S+++  ISS   LTDAEV YI+ RQLLYYRDEFGDRGE+V+ DPSLVFENPR +NAYIAL
Sbjct: 26  SAEQISISSHGHLTDAEVMYIKRRQLLYYRDEFGDRGEDVTVDPSLVFENPRQRNAYIAL 85

Query: 13  QAWK 2
           QAWK
Sbjct: 86  QAWK 89


>emb|CBI28097.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/64 (75%), Positives = 55/64 (85%)
 Frame = -2

Query: 193 SSQETFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIAL 14
           S+++  ISS   LTDAEV YI+ RQLLYYRDEFGDRGE+V+ DPSLVFENPR +NAYIAL
Sbjct: 26  SAEQISISSHGHLTDAEVMYIKRRQLLYYRDEFGDRGEDVTVDPSLVFENPRQRNAYIAL 85

Query: 13  QAWK 2
           QAWK
Sbjct: 86  QAWK 89


>ref|NP_189091.1| leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana]
           gi|75334999|sp|Q9LHF1.1|LRX4_ARATH RecName:
           Full=Leucine-rich repeat extensin-like protein 4;
           Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell
           wall hydroxyproline-rich glycoprotein; Flags: Precursor
           gi|9294099|dbj|BAB01951.1| extensin-like protein
           [Arabidopsis thaliana] gi|332643381|gb|AEE76902.1|
           leucine-rich repeat extensin-like protein 4 [Arabidopsis
           thaliana]
          Length = 494

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/63 (69%), Positives = 54/63 (85%)
 Frame = -2

Query: 190 SQETFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIALQ 11
           S    ISS + L+D EV++I+ RQLLYYRDEFGDRGENV+ DPSL+FENPR+++AYIALQ
Sbjct: 23  SHSLSISSNAPLSDTEVRFIQRRQLLYYRDEFGDRGENVTVDPSLIFENPRLRSAYIALQ 82

Query: 10  AWK 2
           AWK
Sbjct: 83  AWK 85


>ref|XP_002885650.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331490|gb|EFH61909.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 492

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/63 (68%), Positives = 53/63 (84%)
 Frame = -2

Query: 190 SQETFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIALQ 11
           S    ISS + L+D EV++I+ RQLLYYRDEFGDRGE V+ DPSL+FENPR+++AYIALQ
Sbjct: 23  SHSLSISSNARLSDTEVRFIQRRQLLYYRDEFGDRGEKVTVDPSLIFENPRLRSAYIALQ 82

Query: 10  AWK 2
           AWK
Sbjct: 83  AWK 85


>ref|XP_002324974.1| predicted protein [Populus trichocarpa] gi|222866408|gb|EEF03539.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/66 (66%), Positives = 52/66 (78%)
 Frame = -2

Query: 199 SISSQETFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYI 20
           S + Q   ISS   L+DA+  YI+ RQLLYY+DEFGDRGE V+ DPSLVF NPR++NAYI
Sbjct: 26  SAAKQAPTISSYGGLSDADAMYIKKRQLLYYKDEFGDRGERVTVDPSLVFPNPRLRNAYI 85

Query: 19  ALQAWK 2
           ALQAWK
Sbjct: 86  ALQAWK 91


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