BLASTX nr result
ID: Coptis21_contig00030666
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030666 (483 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containi... 174 7e-42 emb|CAN74807.1| hypothetical protein VITISV_022137 [Vitis vinifera] 174 7e-42 ref|XP_002531295.1| pentatricopeptide repeat-containing protein,... 156 1e-36 ref|XP_003539487.1| PREDICTED: pentatricopeptide repeat-containi... 156 2e-36 ref|XP_003541958.1| PREDICTED: pentatricopeptide repeat-containi... 155 3e-36 >ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970 [Vitis vinifera] gi|298204853|emb|CBI34160.3| unnamed protein product [Vitis vinifera] Length = 471 Score = 174 bits (441), Expect = 7e-42 Identities = 87/132 (65%), Positives = 104/132 (78%) Frame = -1 Query: 483 LVLFYSMGSRFGVTPNIQHYGCIVDLLGRAGRLQEAYNFVIEMQLQPDKILWRSLLAACK 304 L LF+SM S+FGVTP IQHYGCIVDLLGRAG L+EAY+FV M ++PD ILWRSLL+ACK Sbjct: 337 LQLFHSMRSKFGVTPGIQHYGCIVDLLGRAGHLKEAYDFVRGMPVEPDAILWRSLLSACK 396 Query: 303 IHGNSAMGENLGKHLLQLQEESGMVDTVSRCEDFIALSNVYASAGRWKDLEMVREKMKGR 124 +H + MGE +GK LLQLQ + D V+ EDFIALSNVYASA RW+D+E VRE MK + Sbjct: 397 VHRDVVMGEEVGKLLLQLQPQQSFADLVAASEDFIALSNVYASAERWEDVETVREAMKVK 456 Query: 123 CIQTEQGYSSVQ 88 I+T+ G SSVQ Sbjct: 457 GIETKPGCSSVQ 468 >emb|CAN74807.1| hypothetical protein VITISV_022137 [Vitis vinifera] Length = 437 Score = 174 bits (441), Expect = 7e-42 Identities = 87/132 (65%), Positives = 104/132 (78%) Frame = -1 Query: 483 LVLFYSMGSRFGVTPNIQHYGCIVDLLGRAGRLQEAYNFVIEMQLQPDKILWRSLLAACK 304 L LF+SM S+FGVTP IQHYGCIVDLLGRAG L+EAY+FV M ++PD ILWRSLL+ACK Sbjct: 303 LQLFHSMRSKFGVTPGIQHYGCIVDLLGRAGHLKEAYDFVRGMPVEPDAILWRSLLSACK 362 Query: 303 IHGNSAMGENLGKHLLQLQEESGMVDTVSRCEDFIALSNVYASAGRWKDLEMVREKMKGR 124 +H + MGE +GK LLQLQ + D V+ EDFIALSNVYASA RW+D+E VRE MK + Sbjct: 363 VHRDVVMGEEVGKLLLQLQPQQSFADLVAASEDFIALSNVYASAERWEDVETVREAMKVK 422 Query: 123 CIQTEQGYSSVQ 88 I+T+ G SSVQ Sbjct: 423 GIETKPGCSSVQ 434 >ref|XP_002531295.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223529128|gb|EEF31108.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 313 Score = 156 bits (395), Expect = 1e-36 Identities = 72/134 (53%), Positives = 100/134 (74%) Frame = -1 Query: 483 LVLFYSMGSRFGVTPNIQHYGCIVDLLGRAGRLQEAYNFVIEMQLQPDKILWRSLLAACK 304 L LF++M +FG+ P IQHYGCIVDLLG+ G L+EAY F+ M ++PD ILWR LL+ACK Sbjct: 171 LHLFHNMKGKFGIEPGIQHYGCIVDLLGKGGHLKEAYEFIAGMPMEPDAILWRCLLSACK 230 Query: 303 IHGNSAMGENLGKHLLQLQEESGMVDTVSRCEDFIALSNVYASAGRWKDLEMVREKMKGR 124 +HG+ MGE + K LL LQ E V++ ED++ALSNVYASA RW+D+E++R++MK + Sbjct: 231 VHGDVVMGEKVAKILLHLQPEKNSVESDDSSEDYVALSNVYASAERWEDVEILRKEMKVK 290 Query: 123 CIQTEQGYSSVQLV 82 ++T+ G S VQ + Sbjct: 291 RLETKPGASLVQAI 304 >ref|XP_003539487.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970-like [Glycine max] Length = 595 Score = 156 bits (394), Expect = 2e-36 Identities = 79/134 (58%), Positives = 97/134 (72%) Frame = -1 Query: 483 LVLFYSMGSRFGVTPNIQHYGCIVDLLGRAGRLQEAYNFVIEMQLQPDKILWRSLLAACK 304 L LF M FGV P IQHYGCIVDLLGRAG+L+EAY+F+++M + PD ++WRSLLAAC Sbjct: 459 LQLFLEMKRTFGVMPQIQHYGCIVDLLGRAGKLEEAYDFIMQMPINPDAVIWRSLLAACN 518 Query: 303 IHGNSAMGENLGKHLLQLQEESGMVDTVSRCEDFIALSNVYASAGRWKDLEMVREKMKGR 124 IHG+ MGE +GK LLQL+E S S ED+IALSNVYA A +W D+E VR KMK + Sbjct: 519 IHGDVVMGEKVGKFLLQLEEWSSAESPKS--EDYIALSNVYALAEKWDDVETVRIKMKAK 576 Query: 123 CIQTEQGYSSVQLV 82 I + G S+VQ V Sbjct: 577 SILNKAGSSAVQTV 590 >ref|XP_003541958.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970-like [Glycine max] Length = 477 Score = 155 bits (392), Expect = 3e-36 Identities = 76/139 (54%), Positives = 101/139 (72%) Frame = -1 Query: 483 LVLFYSMGSRFGVTPNIQHYGCIVDLLGRAGRLQEAYNFVIEMQLQPDKILWRSLLAACK 304 L+LF+ M FG+ P I+HYGCIVDLLGRAG L+EAY+F++ M + PD ++WRSLL ACK Sbjct: 339 LILFHEMKRTFGMMPQIKHYGCIVDLLGRAGNLEEAYDFIMRMPINPDAVIWRSLLGACK 398 Query: 303 IHGNSAMGENLGKHLLQLQEESGMVDTVSRCEDFIALSNVYASAGRWKDLEMVREKMKGR 124 IHG+ MGE +GK LLQL+E S S ED+IALSNVYA A +W D+E+VR+ MK + Sbjct: 399 IHGDVVMGEKVGKFLLQLEEWSSAESPKS--EDYIALSNVYALAEKWDDVEIVRKTMKSK 456 Query: 123 CIQTEQGYSSVQLVKS*IV 67 I ++ G S+VQ V ++ Sbjct: 457 GILSKAGSSAVQTVSMAVI 475