BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030655
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ...    72   6e-11
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ...    72   6e-11
ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi...    68   7e-10
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,...    62   5e-08
ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08

>ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503561|gb|AES84764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 989

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
 Frame = +1

Query: 1   VEEAVGLLSEMIKRGVEIDCVTCNVLVNWFCQIGLLDNAEEVFMD----GIERDVVGYNT 168
           V++  GLLSEM+KRG+  D +TCN+LV  +C+IGL+  AE V  +    G+ +DV+G NT
Sbjct: 178 VDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNT 237

Query: 169 LVDGY 183
           L+DGY
Sbjct: 238 LIDGY 242


>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503316|gb|AES84519.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
 Frame = +1

Query: 1   VEEAVGLLSEMIKRGVEIDCVTCNVLVNWFCQIGLLDNAEEVFMD----GIERDVVGYNT 168
           V++  GLLSEM+KRG+  D +TCN+LV  +C+IGL+  AE V  +    G+ +DV+G NT
Sbjct: 178 VDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNT 237

Query: 169 LVDGY 183
           L+DGY
Sbjct: 238 LIDGY 242


>ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 4/64 (6%)
 Frame = +1

Query: 4   EEAVGLLSEMIKRGVEIDCVTCNVLVNWFCQIGLLDNAEEVFMD----GIERDVVGYNTL 171
           ++  GLLSEM+K+GV  D VTCN+LV  +CQIGL+  AE +  +    G+  D +G NTL
Sbjct: 92  DQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTL 151

Query: 172 VDGY 183
           VDGY
Sbjct: 152 VDGY 155


>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1016

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
 Frame = +1

Query: 1   VEEAVGLLSEMIKRGVEIDCVTCNVLVNWFCQIGLLDNAEEVF----MDGIERDVVGYNT 168
           V +A G LS M+K+    D +TCN+LV  FC+IGL    E +       G  +DV+G+NT
Sbjct: 93  VNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNT 152

Query: 169 LVDGYFK 189
           L+DGY K
Sbjct: 153 LIDGYCK 159


>ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|222853877|gb|EEE91424.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
 Frame = +1

Query: 1   VEEAVGLLSEMIKRGVEIDCVTCNVLVNWFCQIGLLDNAEEVFMDGIER----DVVGYNT 168
           VE+ +GL  EMI++G+    +TCN+L+N FC  G + NA E   D I R    D+V YN+
Sbjct: 573 VEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNS 632

Query: 169 LVDGYFKR 192
           L++G  KR
Sbjct: 633 LINGLCKR 640