BLASTX nr result
ID: Coptis21_contig00030654
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030654 (309 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002329950.1| tubulin gamma complex-associated protein [Po... 95 7e-18 ref|XP_002531187.1| transferase, transferring glycosyl groups, p... 85 5e-15 ref|XP_002282254.1| PREDICTED: uncharacterized protein LOC100247... 83 3e-14 emb|CAN72176.1| hypothetical protein VITISV_012536 [Vitis vinifera] 83 3e-14 ref|XP_003602994.1| Gamma-tubulin complex component 4 [Medicago ... 81 8e-14 >ref|XP_002329950.1| tubulin gamma complex-associated protein [Populus trichocarpa] gi|222871972|gb|EEF09103.1| tubulin gamma complex-associated protein [Populus trichocarpa] Length = 977 Score = 94.7 bits (234), Expect = 7e-18 Identities = 48/97 (49%), Positives = 62/97 (63%) Frame = +1 Query: 19 RVNCMDNLPFSKSFFPENPVITVCQTLLDNSRASHDKLNVSGSFNLPSLDDNGLRQAIFS 198 + +D P +FFPENP IT CQ+LLD +R S LN+S +F LP L+D LR AIF Sbjct: 466 KTGAVDEFPLQGTFFPENPAITACQSLLDKNRDSWKMLNLSKNFYLPPLNDEVLRHAIFG 525 Query: 199 GTDGTTSAPKETNYMFGFQYVESVHIRSKNDIKALEL 309 G +G SA K T+Y FGFQ+ S + S+ND K LE+ Sbjct: 526 GENGPVSAVKGTDYAFGFQFGVSDYDDSQNDTKLLEV 562 >ref|XP_002531187.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223529228|gb|EEF31202.1| transferase, transferring glycosyl groups, putative [Ricinus communis] Length = 863 Score = 85.1 bits (209), Expect = 5e-15 Identities = 43/92 (46%), Positives = 58/92 (63%) Frame = +1 Query: 31 MDNLPFSKSFFPENPVITVCQTLLDNSRASHDKLNVSGSFNLPSLDDNGLRQAIFSGTDG 210 MD P +SF PENPVITVCQTLLD + S LN+S F+LP L+D LR+ +F Sbjct: 354 MDEFPLQRSFCPENPVITVCQTLLDEHKGSWKILNLSKHFHLPPLNDEVLRETVFGCESE 413 Query: 211 TTSAPKETNYMFGFQYVESVHIRSKNDIKALE 306 +SA T+Y FGFQ+ +S ++ ++ K LE Sbjct: 414 VSSAVNGTDYTFGFQFGKSEYLCLQDSTKLLE 445 >ref|XP_002282254.1| PREDICTED: uncharacterized protein LOC100247210 [Vitis vinifera] Length = 1023 Score = 82.8 bits (203), Expect = 3e-14 Identities = 41/85 (48%), Positives = 58/85 (68%) Frame = +1 Query: 52 KSFFPENPVITVCQTLLDNSRASHDKLNVSGSFNLPSLDDNGLRQAIFSGTDGTTSAPKE 231 +S PENPVIT+C+ L+ +R + LN+S +F LP L+D GLR+AIF G S+ K Sbjct: 516 RSSCPENPVITMCKLFLNKNRDAWSTLNLSRNFYLPPLNDEGLREAIFGEKIGLGSSAKG 575 Query: 232 TNYMFGFQYVESVHIRSKNDIKALE 306 T+Y F F++ ES ++RSK+D K LE Sbjct: 576 TDYAFAFKFAESEYLRSKDDTKLLE 600 >emb|CAN72176.1| hypothetical protein VITISV_012536 [Vitis vinifera] Length = 740 Score = 82.8 bits (203), Expect = 3e-14 Identities = 41/85 (48%), Positives = 58/85 (68%) Frame = +1 Query: 52 KSFFPENPVITVCQTLLDNSRASHDKLNVSGSFNLPSLDDNGLRQAIFSGTDGTTSAPKE 231 +S PENPVIT+C+ L+ +R + LN+S +F LP L+D GLR+AIF G S+ K Sbjct: 449 RSSCPENPVITMCKLFLNKNRDAWSTLNLSRNFYLPPLNDEGLREAIFGEKIGLGSSAKG 508 Query: 232 TNYMFGFQYVESVHIRSKNDIKALE 306 T+Y F F++ ES ++RSK+D K LE Sbjct: 509 TDYAFAFKFAESEYLRSKDDTKLLE 533 >ref|XP_003602994.1| Gamma-tubulin complex component 4 [Medicago truncatula] gi|355492042|gb|AES73245.1| Gamma-tubulin complex component 4 [Medicago truncatula] Length = 1076 Score = 81.3 bits (199), Expect = 8e-14 Identities = 47/101 (46%), Positives = 60/101 (59%) Frame = +1 Query: 4 NGGDRRVNCMDNLPFSKSFFPENPVITVCQTLLDNSRASHDKLNVSGSFNLPSLDDNGLR 183 NG R +++ F +NPVITVC+ + NSR S LN+S F LPSL+D GLR Sbjct: 479 NGDSRGDKVVEDKLFLLRSCLQNPVITVCRKTIGNSRDSLKTLNLSRKFCLPSLNDEGLR 538 Query: 184 QAIFSGTDGTTSAPKETNYMFGFQYVESVHIRSKNDIKALE 306 +AIF G + S + TNY FGFQY ES I S++ K LE Sbjct: 539 KAIFGGESTSFSDSEGTNYTFGFQYDESKFIHSQDKRKLLE 579