BLASTX nr result

ID: Coptis21_contig00030636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030636
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517792.1| conserved hypothetical protein [Ricinus comm...    57   1e-06
ref|XP_002322718.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002336094.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002317744.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-05

>ref|XP_002517792.1| conserved hypothetical protein [Ricinus communis]
           gi|223543064|gb|EEF44599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 79

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/42 (54%), Positives = 31/42 (73%)
 Frame = +1

Query: 70  MSKFVEFLNMGMKIVGRFQSQYPQTARKYYHPPTNVDDHQNY 195
           M K++E L+ G++IV RF S  PQTAR YYHPP N D+H ++
Sbjct: 1   MGKYMEILDAGVRIVARFHSHCPQTARMYYHPPANSDEHHHH 42


>ref|XP_002322718.1| predicted protein [Populus trichocarpa] gi|222867348|gb|EEF04479.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/59 (44%), Positives = 37/59 (62%)
 Frame = +1

Query: 70  MSKFVEFLNMGMKIVGRFQSQYPQTARKYYHPPTNVDDHQNYFLFNSHDRTSGDNSEVS 246
           M K+VE L+ G++I GRF S  PQTAR YYHPP+N +D  ++   + H    G  S+ +
Sbjct: 1   MGKYVELLDAGVRIAGRFYSHCPQTARMYYHPPSNSEDLHHH---HHHGHNGGSGSQAT 56


>ref|XP_002336094.1| predicted protein [Populus trichocarpa] gi|222872213|gb|EEF09344.1|
           predicted protein [Populus trichocarpa]
          Length = 73

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 27/39 (69%)
 Frame = +1

Query: 70  MSKFVEFLNMGMKIVGRFQSQYPQTARKYYHPPTNVDDH 186
           M K+ E L+ G++I  RF S  PQTAR YYHPPTN D H
Sbjct: 1   MGKYTEILDAGIRIASRFHSHCPQTARMYYHPPTNADSH 39


>ref|XP_002317744.1| predicted protein [Populus trichocarpa] gi|222858417|gb|EEE95964.1|
           predicted protein [Populus trichocarpa]
          Length = 87

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
 Frame = +1

Query: 70  MSKFVEFLN---MGMKIVGRFQSQYPQTARKYYHPPTNVDDHQNYFLFNSHDRTSGDNSE 240
           M K+VE+L+   +G++I  RF S+ PQT R YYHPP+  +DH +      H + +G++ +
Sbjct: 1   MGKYVEWLDVAHLGVRIASRFHSRCPQTGRSYYHPPSGSEDHHH------HQKGAGESDQ 54

Query: 241 VSNFKAMDELD 273
           V   + + ++D
Sbjct: 55  VPVVEDLTQMD 65


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