BLASTX nr result

ID: Coptis21_contig00030634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030634
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268156.2| PREDICTED: protein PRD1-like [Vitis vinifera]     118   4e-25
emb|CBI39380.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002302892.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_003601715.1| hypothetical protein MTR_3g084640 [Medicago ...   112   3e-23
ref|XP_002516401.1| conserved hypothetical protein [Ricinus comm...   110   9e-23

>ref|XP_002268156.2| PREDICTED: protein PRD1-like [Vitis vinifera]
          Length = 1291

 Score =  118 bits (296), Expect = 4e-25
 Identities = 71/141 (50%), Positives = 88/141 (62%)
 Frame = -1

Query: 429  RGTAEMSYQSIPCSTEAEXXXXXXXXXXXXXXLSYRIHPVSLKWLFRQEKISDALSKQIL 250
            RG A++ YQ IP S EAE               S  I+  SLKWLF+QEKI   LS QIL
Sbjct: 708  RGLAKVGYQ-IPYSPEAERILFELVAQNEWDLSSATINFTSLKWLFQQEKIIKPLSYQIL 766

Query: 249  NICRMNSINGVDIVVHRNKNHFTDVQELGELVSVGDNLVAEILVSLLKQLQVEDGQEEDI 70
              CR NS +G  I++H N +   DVQ L +LV+ GDNL A +LVSLL+QL  E+G E DI
Sbjct: 767  KFCRNNSSSGSHIIIHGNDSQNIDVQGLAKLVAAGDNLGAVLLVSLLQQLIEEEGNECDI 826

Query: 69   TSLLNLMAMILNRFPVASNQL 7
             S++NLM  I+N FP AS+QL
Sbjct: 827  ISVVNLMVDIINIFPAASDQL 847


>emb|CBI39380.3| unnamed protein product [Vitis vinifera]
          Length = 1312

 Score =  118 bits (296), Expect = 4e-25
 Identities = 71/141 (50%), Positives = 88/141 (62%)
 Frame = -1

Query: 429  RGTAEMSYQSIPCSTEAEXXXXXXXXXXXXXXLSYRIHPVSLKWLFRQEKISDALSKQIL 250
            RG A++ YQ IP S EAE               S  I+  SLKWLF+QEKI   LS QIL
Sbjct: 729  RGLAKVGYQ-IPYSPEAERILFELVAQNEWDLSSATINFTSLKWLFQQEKIIKPLSYQIL 787

Query: 249  NICRMNSINGVDIVVHRNKNHFTDVQELGELVSVGDNLVAEILVSLLKQLQVEDGQEEDI 70
              CR NS +G  I++H N +   DVQ L +LV+ GDNL A +LVSLL+QL  E+G E DI
Sbjct: 788  KFCRNNSSSGSHIIIHGNDSQNIDVQGLAKLVAAGDNLGAVLLVSLLQQLIEEEGNECDI 847

Query: 69   TSLLNLMAMILNRFPVASNQL 7
             S++NLM  I+N FP AS+QL
Sbjct: 848  ISVVNLMVDIINIFPAASDQL 868


>ref|XP_002302892.1| predicted protein [Populus trichocarpa] gi|222844618|gb|EEE82165.1|
            predicted protein [Populus trichocarpa]
          Length = 1344

 Score =  115 bits (288), Expect = 4e-24
 Identities = 67/143 (46%), Positives = 83/143 (58%)
 Frame = -1

Query: 429  RGTAEMSYQSIPCSTEAEXXXXXXXXXXXXXXLSYRIHPVSLKWLFRQEKISDALSKQIL 250
            R  A+M++Q IP S EAE               S RIH  SLKWLF+QEKIS  LS QIL
Sbjct: 735  RAAAKMNHQ-IPYSPEAERILFHLLNETEWDLPSSRIHLESLKWLFQQEKISKPLSNQIL 793

Query: 249  NICRMNSINGVDIVVHRNKNHFTDVQELGELVSVGDNLVAEILVSLLKQLQVEDGQEEDI 70
              CR NS N   I++H   N   ++Q + E+ S  DN +A + V LL QL  E+ QE DI
Sbjct: 794  KFCRSNSSNRTQIIIHGENNQIMNLQVISEMASSADNHIARLSVCLLIQLAEEESQEHDI 853

Query: 69   TSLLNLMAMILNRFPVASNQLWL 1
             SL+  +AMI N FP AS+QL L
Sbjct: 854  ISLVKFLAMITNIFPSASDQLCL 876


>ref|XP_003601715.1| hypothetical protein MTR_3g084640 [Medicago truncatula]
            gi|355490763|gb|AES71966.1| hypothetical protein
            MTR_3g084640 [Medicago truncatula]
          Length = 1276

 Score =  112 bits (280), Expect = 3e-23
 Identities = 69/144 (47%), Positives = 87/144 (60%)
 Frame = -1

Query: 432  LRGTAEMSYQSIPCSTEAEXXXXXXXXXXXXXXLSYRIHPVSLKWLFRQEKISDALSKQI 253
            LRG   M+YQ I  S EAE              LS RIH VSLKWLF+QE I ++L  QI
Sbjct: 692  LRGLGNMNYQ-IHYSREAEEIIFQLINNGEWDLLSARIHTVSLKWLFQQENIINSLCHQI 750

Query: 252  LNICRMNSINGVDIVVHRNKNHFTDVQELGELVSVGDNLVAEILVSLLKQLQVEDGQEED 73
            L  CR N++ G D+++  N N   +VQ L ELVS  DN  A + + LL QL  E+GQE D
Sbjct: 751  LKFCRNNNLEGDDMIIG-NSNQTVNVQTLAELVSSEDNYGARLFICLLAQLAEEEGQEHD 809

Query: 72   ITSLLNLMAMILNRFPVASNQLWL 1
            I S+LNLMA +++  P AS+QL L
Sbjct: 810  IISVLNLMATMIHICPAASDQLSL 833


>ref|XP_002516401.1| conserved hypothetical protein [Ricinus communis]
            gi|223544499|gb|EEF46018.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1304

 Score =  110 bits (276), Expect = 9e-23
 Identities = 66/143 (46%), Positives = 82/143 (57%)
 Frame = -1

Query: 429  RGTAEMSYQSIPCSTEAEXXXXXXXXXXXXXXLSYRIHPVSLKWLFRQEKISDALSKQIL 250
            R  AEM  +  P S EAE               S RIH VSLKWLFRQEKIS  LS +IL
Sbjct: 715  RSVAEMDCR-FPYSPEAERILFHLLTENEWDLPSSRIHLVSLKWLFRQEKISKPLSYEIL 773

Query: 249  NICRMNSINGVDIVVHRNKNHFTDVQELGELVSVGDNLVAEILVSLLKQLQVEDGQEEDI 70
              C+ N  N   IVVH   N   +VQ + EL++  DN  A +LV LL  L  E+  E+D+
Sbjct: 774  KFCQTNGSNDTQIVVHGEGNQLMNVQVIAELLTSEDNYAARLLVCLLVHLVEEESHEDDV 833

Query: 69   TSLLNLMAMILNRFPVASNQLWL 1
            TS LNL+A+I++  P AS+QL L
Sbjct: 834  TSFLNLLAIIISISPTASDQLSL 856


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