BLASTX nr result

ID: Coptis21_contig00030632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030632
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264112.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   176   3e-42
emb|CBI29731.3| unnamed protein product [Vitis vinifera]              176   3e-42
emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]   176   3e-42
ref|XP_002529010.1| transcription factor, putative [Ricinus comm...   173   2e-41
ref|XP_003539396.1| PREDICTED: transcription factor TCP8-like [G...   172   6e-41

>ref|XP_002264112.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP8-like
           [Vitis vinifera]
          Length = 538

 Score =  176 bits (446), Expect = 3e-42
 Identities = 97/122 (79%), Positives = 101/122 (82%), Gaps = 6/122 (4%)
 Frame = +3

Query: 270 RSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT 449
           RS+KDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT
Sbjct: 165 RSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT 224

Query: 450 GTIPANFSTLNVSLRSGGSSTIVTPMPSKSIASSF----PFAHVT--EQGISHTSMLGYH 611
           GTIPANFSTLNVSLRS G STI  P PSKS   SF      AH    E+G  HT+MLG+H
Sbjct: 225 GTIPANFSTLNVSLRSSG-STISAP-PSKSAPHSFHGALALAHHPHYEEGFPHTAMLGFH 282

Query: 612 AQ 617
            Q
Sbjct: 283 QQ 284


>emb|CBI29731.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  176 bits (446), Expect = 3e-42
 Identities = 97/122 (79%), Positives = 101/122 (82%), Gaps = 6/122 (4%)
 Frame = +3

Query: 270 RSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT 449
           RS+KDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT
Sbjct: 112 RSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT 171

Query: 450 GTIPANFSTLNVSLRSGGSSTIVTPMPSKSIASSF----PFAHVT--EQGISHTSMLGYH 611
           GTIPANFSTLNVSLRS G STI  P PSKS   SF      AH    E+G  HT+MLG+H
Sbjct: 172 GTIPANFSTLNVSLRSSG-STISAP-PSKSAPHSFHGALALAHHPHYEEGFPHTAMLGFH 229

Query: 612 AQ 617
            Q
Sbjct: 230 QQ 231


>emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]
          Length = 550

 Score =  176 bits (446), Expect = 3e-42
 Identities = 97/122 (79%), Positives = 101/122 (82%), Gaps = 6/122 (4%)
 Frame = +3

Query: 270 RSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT 449
           RS+KDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT
Sbjct: 177 RSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT 236

Query: 450 GTIPANFSTLNVSLRSGGSSTIVTPMPSKSIASSF----PFAHVT--EQGISHTSMLGYH 611
           GTIPANFSTLNVSLRS G STI  P PSKS   SF      AH    E+G  HT+MLG+H
Sbjct: 237 GTIPANFSTLNVSLRSSG-STISAP-PSKSAPHSFHGALALAHHPHYEEGFPHTAMLGFH 294

Query: 612 AQ 617
            Q
Sbjct: 295 QQ 296


>ref|XP_002529010.1| transcription factor, putative [Ricinus communis]
           gi|223531550|gb|EEF33380.1| transcription factor,
           putative [Ricinus communis]
          Length = 546

 Score =  173 bits (439), Expect = 2e-41
 Identities = 94/130 (72%), Positives = 102/130 (78%), Gaps = 10/130 (7%)
 Frame = +3

Query: 270 RSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT 449
           RS+KDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLL+QAEPAIIAATGT
Sbjct: 158 RSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLRQAEPAIIAATGT 217

Query: 450 GTIPANFSTLNVSLRSGGSSTIVTPMPSKSIASSFPFA----------HVTEQGISHTSM 599
           GTIPANFSTLNVSLRS G  T+  P PSKS   SF  A          H  ++G +HT M
Sbjct: 218 GTIPANFSTLNVSLRSSG-CTLSAP-PSKSAPHSFHGALALAQAHHHSHYDQEGFAHTGM 275

Query: 600 LGYHAQHTHI 629
           LG+H  H H+
Sbjct: 276 LGFH-HHQHL 284


>ref|XP_003539396.1| PREDICTED: transcription factor TCP8-like [Glycine max]
          Length = 420

 Score =  172 bits (435), Expect = 6e-41
 Identities = 91/122 (74%), Positives = 99/122 (81%), Gaps = 5/122 (4%)
 Frame = +3

Query: 270 RSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT 449
           RS+KDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT
Sbjct: 61  RSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT 120

Query: 450 GTIPANFSTLNVSLRSGGSSTIVTPMPSKSIASSFPFA-----HVTEQGISHTSMLGYHA 614
           GTIPANFSTLNVSLRS G ST+  P PSKS   +F  A     H  ++   H ++LG+H 
Sbjct: 121 GTIPANFSTLNVSLRSSG-STLSAP-PSKSAPHTFHGALALAHHPYDEAFQHPALLGFHP 178

Query: 615 QH 620
            H
Sbjct: 179 HH 180


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