BLASTX nr result

ID: Coptis21_contig00030626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030626
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38018.3| unnamed protein product [Vitis vinifera]              356   1e-96
ref|XP_002274534.1| PREDICTED: DNA replication licensing factor ...   356   1e-96
ref|XP_003537854.1| PREDICTED: DNA replication licensing factor ...   348   4e-94
ref|XP_003540982.1| PREDICTED: DNA replication licensing factor ...   347   1e-93
ref|XP_002512966.1| DNA replication licensing factor MCM4, putat...   347   1e-93

>emb|CBI38018.3| unnamed protein product [Vitis vinifera]
          Length = 834

 Score =  356 bits (914), Expect = 1e-96
 Identities = 182/198 (91%), Positives = 190/198 (95%)
 Frame = +2

Query: 2    KMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLP 181
            KMS+NARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLP
Sbjct: 542  KMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLP 601

Query: 182  PTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDVLDIPTLTAYLSYARRH 361
            PTLLSRFDLIYL+LDKADE  DRRLAKHIVALHFENPE+++QDVLD+PTLTAY+SYAR+H
Sbjct: 602  PTLLSRFDLIYLILDKADEQTDRRLAKHIVALHFENPESLEQDVLDLPTLTAYVSYARKH 661

Query: 362  IRPKLSDEAAEELIRRYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWV 541
            I PKLSDEAAEEL R YVEMRRRGNFPGSSKKVITATPRQIESLIRL EALARIRFSEWV
Sbjct: 662  IHPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLGEALARIRFSEWV 721

Query: 542  EKPDVAEAFRLLEVALQQ 595
            EK DV EAFRLLEVALQQ
Sbjct: 722  EKRDVMEAFRLLEVALQQ 739


>ref|XP_002274534.1| PREDICTED: DNA replication licensing factor MCM4 [Vitis vinifera]
          Length = 840

 Score =  356 bits (914), Expect = 1e-96
 Identities = 182/198 (91%), Positives = 190/198 (95%)
 Frame = +2

Query: 2    KMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLP 181
            KMS+NARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLP
Sbjct: 548  KMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLP 607

Query: 182  PTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDVLDIPTLTAYLSYARRH 361
            PTLLSRFDLIYL+LDKADE  DRRLAKHIVALHFENPE+++QDVLD+PTLTAY+SYAR+H
Sbjct: 608  PTLLSRFDLIYLILDKADEQTDRRLAKHIVALHFENPESLEQDVLDLPTLTAYVSYARKH 667

Query: 362  IRPKLSDEAAEELIRRYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWV 541
            I PKLSDEAAEEL R YVEMRRRGNFPGSSKKVITATPRQIESLIRL EALARIRFSEWV
Sbjct: 668  IHPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLGEALARIRFSEWV 727

Query: 542  EKPDVAEAFRLLEVALQQ 595
            EK DV EAFRLLEVALQQ
Sbjct: 728  EKRDVMEAFRLLEVALQQ 745


>ref|XP_003537854.1| PREDICTED: DNA replication licensing factor mcm4-B-like [Glycine max]
          Length = 835

 Score =  348 bits (893), Expect = 4e-94
 Identities = 178/198 (89%), Positives = 188/198 (94%)
 Frame = +2

Query: 2    KMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLP 181
            KMS+NARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLP
Sbjct: 543  KMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLP 602

Query: 182  PTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDVLDIPTLTAYLSYARRH 361
            PTLLSRFDLIYLMLDKADE  DRRLAKHIV+LHFENPE V+QDVLDI TLT Y+SYAR+H
Sbjct: 603  PTLLSRFDLIYLMLDKADEQTDRRLAKHIVSLHFENPENVEQDVLDISTLTDYVSYARKH 662

Query: 362  IRPKLSDEAAEELIRRYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWV 541
            I P+LSDEAAEEL R YVE+R+RGNFPGSSKKVITATPRQIESLIRLSEALAR+RFSEWV
Sbjct: 663  IHPQLSDEAAEELTRGYVEIRKRGNFPGSSKKVITATPRQIESLIRLSEALARMRFSEWV 722

Query: 542  EKPDVAEAFRLLEVALQQ 595
            EK DV EAFRLLEVA+QQ
Sbjct: 723  EKHDVMEAFRLLEVAMQQ 740


>ref|XP_003540982.1| PREDICTED: DNA replication licensing factor mcm4-B-like [Glycine max]
          Length = 839

 Score =  347 bits (889), Expect = 1e-93
 Identities = 178/198 (89%), Positives = 187/198 (94%)
 Frame = +2

Query: 2    KMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLP 181
            KMS+NARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLP
Sbjct: 547  KMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLP 606

Query: 182  PTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDVLDIPTLTAYLSYARRH 361
            PTLLSRFDLIYLMLDKA E  DRRLAKHIV+LHFENPE V+QDVLDI TLT Y+SYARRH
Sbjct: 607  PTLLSRFDLIYLMLDKAHEQTDRRLAKHIVSLHFENPENVEQDVLDISTLTDYVSYARRH 666

Query: 362  IRPKLSDEAAEELIRRYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWV 541
            I P+LSDEAAEEL R YVE+R+RGNFPGSSKKVITATPRQIESLIRLSEALAR+RFSEWV
Sbjct: 667  IHPQLSDEAAEELTRGYVEIRKRGNFPGSSKKVITATPRQIESLIRLSEALARMRFSEWV 726

Query: 542  EKPDVAEAFRLLEVALQQ 595
            EK DV EAFRLLEVA+QQ
Sbjct: 727  EKHDVMEAFRLLEVAMQQ 744


>ref|XP_002512966.1| DNA replication licensing factor MCM4, putative [Ricinus communis]
            gi|223547977|gb|EEF49469.1| DNA replication licensing
            factor MCM4, putative [Ricinus communis]
          Length = 867

 Score =  347 bits (889), Expect = 1e-93
 Identities = 178/198 (89%), Positives = 186/198 (93%)
 Frame = +2

Query: 2    KMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLP 181
            KMSENARSMLHEVMEQQT+SIAKAGIIASLNARTSVLACANP GSRYNPRLSVIDNIHLP
Sbjct: 575  KMSENARSMLHEVMEQQTISIAKAGIIASLNARTSVLACANPIGSRYNPRLSVIDNIHLP 634

Query: 182  PTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDVLDIPTLTAYLSYARRH 361
            P+LLSRFDLIYL+LDKADE  DR LAKHIV+LHFENPE+ Q +VLDI TLTAYLSYAR+H
Sbjct: 635  PSLLSRFDLIYLILDKADEQTDRHLAKHIVSLHFENPESAQHNVLDIATLTAYLSYARKH 694

Query: 362  IRPKLSDEAAEELIRRYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWV 541
            I PKLSDEAAEEL R YVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWV
Sbjct: 695  IHPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWV 754

Query: 542  EKPDVAEAFRLLEVALQQ 595
            EK DV EAFRLLEVA+QQ
Sbjct: 755  EKHDVIEAFRLLEVAMQQ 772


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