BLASTX nr result
ID: Coptis21_contig00030617
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030617 (410 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ... 268 4e-70 ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic ... 266 1e-69 gb|AFW71549.1| putative DNA polymerase epsilon catalytic subunit... 265 4e-69 ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [S... 265 4e-69 dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subuni... 264 5e-69 >ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis vinifera] Length = 2214 Score = 268 bits (684), Expect = 4e-70 Identities = 128/136 (94%), Positives = 131/136 (96%) Frame = +2 Query: 2 KNQNECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQ 181 KNQ ECRAKF+CHLDCFAWVKRDSYLPQGSQGLKAVTK KLGYDPLEVNPEDMVRFAKE Sbjct: 365 KNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEL 424 Query: 182 PQTMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYK 361 PQ MASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYK Sbjct: 425 PQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYK 484 Query: 362 ANVICPNKYQADLEKF 409 ANVICPNK+Q+D EKF Sbjct: 485 ANVICPNKHQSDPEKF 500 >ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Brachypodium distachyon] Length = 2127 Score = 266 bits (680), Expect = 1e-69 Identities = 126/135 (93%), Positives = 131/135 (97%) Frame = +2 Query: 5 NQNECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQP 184 NQ ECRAKF+CHLDCFAWVKRDSYLPQGSQGLKAVTK KLGYDPLEVNPEDMVRFA EQP Sbjct: 393 NQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAMEQP 452 Query: 185 QTMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKA 364 QTMASYSVSDAV+TYYLYMTYVHPFIFSLATIIPM PDEVLRKGSGTLCEMLLMVQA+KA Sbjct: 453 QTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKA 512 Query: 365 NVICPNKYQADLEKF 409 N+ICPNK+QADLEKF Sbjct: 513 NIICPNKHQADLEKF 527 >gb|AFW71549.1| putative DNA polymerase epsilon catalytic subunit family protein [Zea mays] Length = 1856 Score = 265 bits (676), Expect = 4e-69 Identities = 126/135 (93%), Positives = 131/135 (97%) Frame = +2 Query: 5 NQNECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQP 184 NQ ECRAKF+CHLDCFAWVKRDSYLPQGSQGLKAVTK KLGYDPLEVNPEDMVRFA EQP Sbjct: 102 NQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAMEQP 161 Query: 185 QTMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKA 364 QTMASYSVSDAV+TYYLYMTYVHPFIFSLATIIPM PDEVLRKGSGTLCEMLLMVQA+KA Sbjct: 162 QTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKA 221 Query: 365 NVICPNKYQADLEKF 409 +VICPNK+QADLEKF Sbjct: 222 SVICPNKHQADLEKF 236 >ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor] gi|241931984|gb|EES05129.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor] Length = 2135 Score = 265 bits (676), Expect = 4e-69 Identities = 126/135 (93%), Positives = 131/135 (97%) Frame = +2 Query: 5 NQNECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQP 184 NQ ECRAKF+CHLDCFAWVKRDSYLPQGSQGLKAVTK KLGYDPLEVNPEDMVRFA EQP Sbjct: 379 NQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAMEQP 438 Query: 185 QTMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKA 364 QTMASYSVSDAV+TYYLYMTYVHPFIFSLATIIPM PDEVLRKGSGTLCEMLLMVQA+KA Sbjct: 439 QTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKA 498 Query: 365 NVICPNKYQADLEKF 409 +VICPNK+QADLEKF Sbjct: 499 SVICPNKHQADLEKF 513 >dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subunit protein isoform b [Oryza sativa Japonica Group] Length = 2257 Score = 264 bits (675), Expect = 5e-69 Identities = 125/135 (92%), Positives = 130/135 (96%) Frame = +2 Query: 5 NQNECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQP 184 NQ ECRAKF+CHLDCFAWVKRDSYLPQGS GLKAVTK KLGYDPLEVNPEDMVRFA EQP Sbjct: 418 NQGECRAKFSCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAMEQP 477 Query: 185 QTMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKA 364 QTMASYSVSDAV+TYYLYMTYVHPFIFSLATIIPM PDEVLRKGSGTLCEMLLMVQA+KA Sbjct: 478 QTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKA 537 Query: 365 NVICPNKYQADLEKF 409 N+ICPNK+QADLEKF Sbjct: 538 NIICPNKHQADLEKF 552