BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030617
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   268   4e-70
ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic ...   266   1e-69
gb|AFW71549.1| putative DNA polymerase epsilon catalytic subunit...   265   4e-69
ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [S...   265   4e-69
dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subuni...   264   5e-69

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
           vinifera]
          Length = 2214

 Score =  268 bits (684), Expect = 4e-70
 Identities = 128/136 (94%), Positives = 131/136 (96%)
 Frame = +2

Query: 2   KNQNECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQ 181
           KNQ ECRAKF+CHLDCFAWVKRDSYLPQGSQGLKAVTK KLGYDPLEVNPEDMVRFAKE 
Sbjct: 365 KNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEL 424

Query: 182 PQTMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYK 361
           PQ MASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYK
Sbjct: 425 PQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYK 484

Query: 362 ANVICPNKYQADLEKF 409
           ANVICPNK+Q+D EKF
Sbjct: 485 ANVICPNKHQSDPEKF 500


>ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Brachypodium
           distachyon]
          Length = 2127

 Score =  266 bits (680), Expect = 1e-69
 Identities = 126/135 (93%), Positives = 131/135 (97%)
 Frame = +2

Query: 5   NQNECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQP 184
           NQ ECRAKF+CHLDCFAWVKRDSYLPQGSQGLKAVTK KLGYDPLEVNPEDMVRFA EQP
Sbjct: 393 NQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAMEQP 452

Query: 185 QTMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKA 364
           QTMASYSVSDAV+TYYLYMTYVHPFIFSLATIIPM PDEVLRKGSGTLCEMLLMVQA+KA
Sbjct: 453 QTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKA 512

Query: 365 NVICPNKYQADLEKF 409
           N+ICPNK+QADLEKF
Sbjct: 513 NIICPNKHQADLEKF 527


>gb|AFW71549.1| putative DNA polymerase epsilon catalytic subunit family protein
           [Zea mays]
          Length = 1856

 Score =  265 bits (676), Expect = 4e-69
 Identities = 126/135 (93%), Positives = 131/135 (97%)
 Frame = +2

Query: 5   NQNECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQP 184
           NQ ECRAKF+CHLDCFAWVKRDSYLPQGSQGLKAVTK KLGYDPLEVNPEDMVRFA EQP
Sbjct: 102 NQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAMEQP 161

Query: 185 QTMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKA 364
           QTMASYSVSDAV+TYYLYMTYVHPFIFSLATIIPM PDEVLRKGSGTLCEMLLMVQA+KA
Sbjct: 162 QTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKA 221

Query: 365 NVICPNKYQADLEKF 409
           +VICPNK+QADLEKF
Sbjct: 222 SVICPNKHQADLEKF 236


>ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor]
           gi|241931984|gb|EES05129.1| hypothetical protein
           SORBIDRAFT_04g020730 [Sorghum bicolor]
          Length = 2135

 Score =  265 bits (676), Expect = 4e-69
 Identities = 126/135 (93%), Positives = 131/135 (97%)
 Frame = +2

Query: 5   NQNECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQP 184
           NQ ECRAKF+CHLDCFAWVKRDSYLPQGSQGLKAVTK KLGYDPLEVNPEDMVRFA EQP
Sbjct: 379 NQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAMEQP 438

Query: 185 QTMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKA 364
           QTMASYSVSDAV+TYYLYMTYVHPFIFSLATIIPM PDEVLRKGSGTLCEMLLMVQA+KA
Sbjct: 439 QTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKA 498

Query: 365 NVICPNKYQADLEKF 409
           +VICPNK+QADLEKF
Sbjct: 499 SVICPNKHQADLEKF 513


>dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subunit protein isoform b
           [Oryza sativa Japonica Group]
          Length = 2257

 Score =  264 bits (675), Expect = 5e-69
 Identities = 125/135 (92%), Positives = 130/135 (96%)
 Frame = +2

Query: 5   NQNECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQP 184
           NQ ECRAKF+CHLDCFAWVKRDSYLPQGS GLKAVTK KLGYDPLEVNPEDMVRFA EQP
Sbjct: 418 NQGECRAKFSCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAMEQP 477

Query: 185 QTMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKA 364
           QTMASYSVSDAV+TYYLYMTYVHPFIFSLATIIPM PDEVLRKGSGTLCEMLLMVQA+KA
Sbjct: 478 QTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKA 537

Query: 365 NVICPNKYQADLEKF 409
           N+ICPNK+QADLEKF
Sbjct: 538 NIICPNKHQADLEKF 552