BLASTX nr result

ID: Coptis21_contig00030616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030616
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30138.3| unnamed protein product [Vitis vinifera]              199   1e-49
ref|XP_002266505.1| PREDICTED: ABC transporter B family member 1...   199   1e-49
gb|AAD10836.1| P-glycoprotein [Solanum tuberosum]                     196   2e-48
ref|XP_003535149.1| PREDICTED: ABC transporter B family member 1...   193   1e-47
ref|XP_002519488.1| multidrug resistance protein 1, 2, putative ...   192   2e-47

>emb|CBI30138.3| unnamed protein product [Vitis vinifera]
          Length = 999

 Score =  199 bits (507), Expect = 1e-49
 Identities = 96/128 (75%), Positives = 110/128 (85%)
 Frame = -2

Query: 385 EQSILQIRTVFAFVGESRTIQAYSSALRISQRIGYRTGLAKGVGLGATYFTVFCCYALLL 206
           EQ+I+QIR VFAFVGESR +QAYS+ALRISQR+GY++G +KG+GLGATYFTVFCCYALLL
Sbjct: 188 EQTIVQIRVVFAFVGESRALQAYSAALRISQRLGYKSGFSKGMGLGATYFTVFCCYALLL 247

Query: 205 WYGGYLVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPS 26
           WYGGYLVRHH+TNGGLAIATMFSVM+GGLAL QSAPSM           KI+  IDHKP+
Sbjct: 248 WYGGYLVRHHYTNGGLAIATMFSVMLGGLALGQSAPSMSAFAKAKVAAAKIFRIIDHKPN 307

Query: 25  IDRNAETG 2
           I+RN ETG
Sbjct: 308 IERNGETG 315


>ref|XP_002266505.1| PREDICTED: ABC transporter B family member 1-like [Vitis vinifera]
          Length = 1354

 Score =  199 bits (507), Expect = 1e-49
 Identities = 96/128 (75%), Positives = 110/128 (85%)
 Frame = -2

Query: 385 EQSILQIRTVFAFVGESRTIQAYSSALRISQRIGYRTGLAKGVGLGATYFTVFCCYALLL 206
           EQ+I+QIR VFAFVGESR +QAYS+ALRISQR+GY++G +KG+GLGATYFTVFCCYALLL
Sbjct: 295 EQTIVQIRVVFAFVGESRALQAYSAALRISQRLGYKSGFSKGMGLGATYFTVFCCYALLL 354

Query: 205 WYGGYLVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPS 26
           WYGGYLVRHH+TNGGLAIATMFSVM+GGLAL QSAPSM           KI+  IDHKP+
Sbjct: 355 WYGGYLVRHHYTNGGLAIATMFSVMLGGLALGQSAPSMSAFAKAKVAAAKIFRIIDHKPN 414

Query: 25  IDRNAETG 2
           I+RN ETG
Sbjct: 415 IERNGETG 422


>gb|AAD10836.1| P-glycoprotein [Solanum tuberosum]
          Length = 1313

 Score =  196 bits (497), Expect = 2e-48
 Identities = 92/128 (71%), Positives = 110/128 (85%)
 Frame = -2

Query: 385 EQSILQIRTVFAFVGESRTIQAYSSALRISQRIGYRTGLAKGVGLGATYFTVFCCYALLL 206
           EQ+++QIRTV  FVGE++ +QAY++ALR+SQ+IGY++G +KG+GLGATYFTVFCCYALLL
Sbjct: 257 EQTVVQIRTVLVFVGEAKALQAYTAALRVSQKIGYKSGFSKGLGLGATYFTVFCCYALLL 316

Query: 205 WYGGYLVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPS 26
           WYGGYLVRHHFTNGGLAIATMF+VMIGGLAL QSAPSM           KI+  IDHKPS
Sbjct: 317 WYGGYLVRHHFTNGGLAIATMFAVMIGGLALGQSAPSMTAFAKARVAAAKIFRIIDHKPS 376

Query: 25  IDRNAETG 2
           +DRNA+TG
Sbjct: 377 VDRNAKTG 384


>ref|XP_003535149.1| PREDICTED: ABC transporter B family member 1-like [Glycine max]
          Length = 1343

 Score =  193 bits (491), Expect = 1e-47
 Identities = 94/128 (73%), Positives = 106/128 (82%)
 Frame = -2

Query: 385 EQSILQIRTVFAFVGESRTIQAYSSALRISQRIGYRTGLAKGVGLGATYFTVFCCYALLL 206
           EQ+++QIR V AFVGE+R +Q YSSALRI+Q+IGYRTG AKG+GLGATYF VFCCYALLL
Sbjct: 285 EQTVVQIRVVLAFVGETRALQGYSSALRIAQKIGYRTGFAKGMGLGATYFVVFCCYALLL 344

Query: 205 WYGGYLVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPS 26
           WYGGYLVRHH+TNGGLAIATMFSVMIGGLAL QSAPSM           KI+  IDHKP 
Sbjct: 345 WYGGYLVRHHYTNGGLAIATMFSVMIGGLALGQSAPSMAAFTKARVAAAKIFRVIDHKPV 404

Query: 25  IDRNAETG 2
           IDR +E+G
Sbjct: 405 IDRRSESG 412


>ref|XP_002519488.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223541351|gb|EEF42902.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 1352

 Score =  192 bits (489), Expect = 2e-47
 Identities = 92/128 (71%), Positives = 108/128 (84%)
 Frame = -2

Query: 385 EQSILQIRTVFAFVGESRTIQAYSSALRISQRIGYRTGLAKGVGLGATYFTVFCCYALLL 206
           EQ+I+QIR V AFVGESR +Q YSSALR++QRIGY++G AKG+GLGATYF VFCCYALLL
Sbjct: 293 EQTIVQIRVVMAFVGESRALQGYSSALRVAQRIGYKSGFAKGMGLGATYFVVFCCYALLL 352

Query: 205 WYGGYLVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPS 26
           WYGG+LVRHH+TNGGLAIATMF+VMIGGLAL QSAPSM           KI+  IDHKP+
Sbjct: 353 WYGGFLVRHHYTNGGLAIATMFAVMIGGLALGQSAPSMGAFAKAKAAAAKIFRIIDHKPA 412

Query: 25  IDRNAETG 2
           +DRN+E+G
Sbjct: 413 VDRNSESG 420



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/121 (24%), Positives = 55/121 (45%)
 Frame = -2

Query: 382  QSILQIRTVFAFVGESRTIQAYSSALRISQRIGYRTGLAKGVGLGATYFTVFCCYALLLW 203
            ++I  +RTV AF  ES+ +  +++ L+   R  +  G   G G G   F+++  YAL LW
Sbjct: 948  EAIANVRTVAAFNSESQIVGLFATNLQAPLRRCFWKGQIAGSGFGIAQFSLYASYALGLW 1007

Query: 202  YGGYLVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPSI 23
            Y  +LV+H  ++    I     +M+     A++                ++  +D K  I
Sbjct: 1008 YASWLVKHEISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEI 1067

Query: 22   D 20
            +
Sbjct: 1068 E 1068


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