BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030610
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...   205   4e-51
emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]   205   4e-51
ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containi...   192   3e-47
ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containi...   189   2e-46
ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group] g...   189   3e-46

>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 933

 Score =  205 bits (521), Expect = 4e-51
 Identities = 95/125 (76%), Positives = 118/125 (94%)
 Frame = +3

Query: 3    HAGMVTEAKEYFESMEELYGIKPTEEHYACMIDILGRSGRLDEAVKVLDEMPFKANAAVW 182
            HAG+VTEAK YFESMEEL+G KP +EHYACMID+LGR+G+++EAV+++++MPF+ANA+VW
Sbjct: 674  HAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVW 733

Query: 183  GALLGASKIHKNVELGRRAAEMLFVLEPEKSGTHVLLANTYAAVGQWGDVAEVRKLMRSS 362
            GALLGA++IHK+VELGRRAAEMLF+LEPEKSGTHVLLAN YA+ G+W +VAEVR+LMR S
Sbjct: 734  GALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDS 793

Query: 363  KVKKE 377
            KVKKE
Sbjct: 794  KVKKE 798


>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  205 bits (521), Expect = 4e-51
 Identities = 95/125 (76%), Positives = 118/125 (94%)
 Frame = +3

Query: 3    HAGMVTEAKEYFESMEELYGIKPTEEHYACMIDILGRSGRLDEAVKVLDEMPFKANAAVW 182
            HAG+VTEAK YFESMEEL+G KP +EHYACMID+LGR+G+++EAV+++++MPF+ANA+VW
Sbjct: 647  HAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVW 706

Query: 183  GALLGASKIHKNVELGRRAAEMLFVLEPEKSGTHVLLANTYAAVGQWGDVAEVRKLMRSS 362
            GALLGA++IHK+VELGRRAAEMLF+LEPEKSGTHVLLAN YA+ G+W +VAEVR+LMR S
Sbjct: 707  GALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDS 766

Query: 363  KVKKE 377
            KVKKE
Sbjct: 767  KVKKE 771


>ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  192 bits (487), Expect = 3e-47
 Identities = 88/125 (70%), Positives = 111/125 (88%)
 Frame = +3

Query: 3   HAGMVTEAKEYFESMEELYGIKPTEEHYACMIDILGRSGRLDEAVKVLDEMPFKANAAVW 182
           HAG+V EAK YF SM+E++GI+ TEEHYACMID+LGR+G+LD+A+++++ MPF+ NAAVW
Sbjct: 618 HAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVW 677

Query: 183 GALLGASKIHKNVELGRRAAEMLFVLEPEKSGTHVLLANTYAAVGQWGDVAEVRKLMRSS 362
           GALL AS++H++ ELGR AAE LF+LEPEKSGTHVLLANTYA+ G W DVA+VRKLM+ S
Sbjct: 678 GALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDS 737

Query: 363 KVKKE 377
           KVKKE
Sbjct: 738 KVKKE 742


>ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  189 bits (480), Expect = 2e-46
 Identities = 86/125 (68%), Positives = 111/125 (88%)
 Frame = +3

Query: 3   HAGMVTEAKEYFESMEELYGIKPTEEHYACMIDILGRSGRLDEAVKVLDEMPFKANAAVW 182
           HAG+V E K+YFE ME ++GIKPT+EHYACMID+LGRSG+L+EAV++++ +PF+A+  VW
Sbjct: 599 HAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVW 658

Query: 183 GALLGASKIHKNVELGRRAAEMLFVLEPEKSGTHVLLANTYAAVGQWGDVAEVRKLMRSS 362
           GALLGA++IHKN+ELG++AA+MLF LEPEKSGTHVLLAN YA+ G W +VA+VRK M+ S
Sbjct: 659 GALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDS 718

Query: 363 KVKKE 377
           KVKKE
Sbjct: 719 KVKKE 723


>ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
           gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|215768699|dbj|BAH00928.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa
           Japonica Group]
          Length = 877

 Score =  189 bits (479), Expect = 3e-46
 Identities = 84/125 (67%), Positives = 111/125 (88%)
 Frame = +3

Query: 3   HAGMVTEAKEYFESMEELYGIKPTEEHYACMIDILGRSGRLDEAVKVLDEMPFKANAAVW 182
           HAG+V EAK YF SM+E++GI  TEEHY+CMID+LGR+G+LD+A+++++ MPF+ANA++W
Sbjct: 618 HAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIW 677

Query: 183 GALLGASKIHKNVELGRRAAEMLFVLEPEKSGTHVLLANTYAAVGQWGDVAEVRKLMRSS 362
           GALLGAS++HK+ ELG+ AAE LF+LEPEKSGTHVLLANTYA+ G W +VA+VRKLM+ S
Sbjct: 678 GALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDS 737

Query: 363 KVKKE 377
            +KKE
Sbjct: 738 NIKKE 742